RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 HLA-DPA1P20036 260 aa11.88□□□□□ -0.51
RFC4-208ENST00000447345 DGKAP23743 735 aa11.88□□□□□ -0.51
RFC4-208ENST00000447345 KCNJ1P48048 391 aa11.88□□□□□ -0.51
RFC4-208ENST00000447345 SPINT3P49223 89 aa11.88□□□□□ -0.51
RFC4-208ENST00000447345 KIAA1024LP59773 190 aa11.88□□□□□ -0.51
RFC4-208ENST00000447345 SIM1P81133 766 aaPredicted RBP11.88□□□□□ -0.51
RFC4-208ENST00000447345 CDK3Q00526 305 aa11.88□□□□□ -0.51
RFC4-208ENST00000447345 PPARDQ03181 441 aa11.88□□□□□ -0.51
RFC4-208ENST00000447345 C1orf61Q13536 156 aa11.88□□□□□ -0.51
RFC4-208ENST00000447345 P3H1Q32P28 736 aa11.88□□□□□ -0.51
RFC4-208ENST00000447345 CCDC157Q569K6 752 aa11.88□□□□□ -0.51
RFC4-208ENST00000447345 GLT6D1Q7Z4J2 308 aa11.88□□□□□ -0.51
RFC4-208ENST00000447345 CBARPQ8N350 705 aaPredicted RBP11.88□□□□□ -0.51
RFC4-208ENST00000447345 CCDC89Q8N998 374 aa11.88□□□□□ -0.51
RFC4-208ENST00000447345 GLIS1Q8NBF1 620 aa11.88□□□□□ -0.51
RFC4-208ENST00000447345 LMX1AQ8TE12 382 aa11.88□□□□□ -0.51
RFC4-208ENST00000447345 COG1Q8WTW3 980 aa11.88□□□□□ -0.51
RFC4-208ENST00000447345 MAIP1Q8WWC4 291 aa11.88□□□□□ -0.51
RFC4-208ENST00000447345 EID2BQ96D98 161 aa11.88□□□□□ -0.51
RFC4-208ENST00000447345 PBKQ96KB5 322 aa11.88□□□□□ -0.51
RFC4-208ENST00000447345 WDR24Q96S15 920 aa11.88□□□□□ -0.51
RFC4-208ENST00000447345 TBL1YQ9BQ87 522 aa11.88□□□□□ -0.51
RFC4-208ENST00000447345 LRRC61Q9BV99 259 aa11.88□□□□□ -0.51
RFC4-208ENST00000447345 AP1M1Q9BXS5 423 aa11.88□□□□□ -0.51
RFC4-208ENST00000447345 MAGEE1Q9HCI5 957 aa11.88□□□□□ -0.51
RFC4-208ENST00000447345 FGF22Q9HCT0 170 aa11.88□□□□□ -0.51
RFC4-208ENST00000447345 BPIFA1Q9NP55 256 aa11.88□□□□□ -0.51
RFC4-208ENST00000447345 MRPL40Q9NQ50 206 aaKnown RBP11.88□□□□□ -0.51
RFC4-208ENST00000447345 PHPT1Q9NRX4 125 aaPredicted RBP11.88□□□□□ -0.51
RFC4-208ENST00000447345 PIH1D1Q9NWS0 290 aaKnown RBP11.88□□□□□ -0.51
RFC4-208ENST00000447345 FTSJ1Q9UET6 329 aa11.88□□□□□ -0.51
RFC4-208ENST00000447345 PTPRBP23467 1997 aa11.88□□□□□ -0.51
RFC4-208ENST00000447345 BPTFQ12830 3046 aa11.88□□□□□ -0.51
RFC4-208ENST00000447345 PGRMC1O00264 195 aaKnown RBP11.87□□□□□ -0.51
RFC4-208ENST00000447345 TOR1BO14657 336 aa11.87□□□□□ -0.51
RFC4-208ENST00000447345 ZNF185O15231 689 aa11.87□□□□□ -0.51
RFC4-208ENST00000447345 RASGRP1O95267 797 aa11.87□□□□□ -0.51
RFC4-208ENST00000447345 CELA2BP08218 269 aaPredicted RBP11.87□□□□□ -0.51
RFC4-208ENST00000447345 ZSCAN5DPP0CG00 497 aa11.87□□□□□ -0.51
RFC4-208ENST00000447345 CEACAM1P13688 526 aa11.87□□□□□ -0.51
RFC4-208ENST00000447345 ACTN2P35609 894 aa11.87□□□□□ -0.51
RFC4-208ENST00000447345 SRP54P61011 504 aaKnown RBP11.87□□□□□ -0.51
RFC4-208ENST00000447345 HNRNPKP61978 463 aaKnown RBP eCLIP11.87□□□□□ -0.51
RFC4-208ENST00000447345 CCNG2Q16589 344 aa11.87□□□□□ -0.51
RFC4-208ENST00000447345 PARP6Q2NL67 630 aa11.87□□□□□ -0.51
RFC4-208ENST00000447345 PRRT3Q5FWE3 981 aa11.87□□□□□ -0.51
RFC4-208ENST00000447345 ZNF765Q7L2R6 523 aa11.87□□□□□ -0.51
RFC4-208ENST00000447345 GSTA5Q7RTV2 222 aa11.87□□□□□ -0.51
RFC4-208ENST00000447345 KANSL1Q7Z3B3 1105 aa11.87□□□□□ -0.51
RFC4-208ENST00000447345 TMC3Q7Z5M5 1100 aa11.87□□□□□ -0.51
RFC4-208ENST00000447345 NRSN1Q8IZ57 195 aa11.87□□□□□ -0.51
RFC4-208ENST00000447345 SLC25A45Q8N413 288 aa11.87□□□□□ -0.51
RFC4-208ENST00000447345 PDCD7Q8N8D1 485 aaKnown RBP11.87□□□□□ -0.51
RFC4-208ENST00000447345 PRELID2Q8N945 189 aa11.87□□□□□ -0.51
RFC4-208ENST00000447345 OR56A4Q8NGH8 313 aa11.87□□□□□ -0.51
RFC4-208ENST00000447345 ATL2Q8NHH9 583 aa11.87□□□□□ -0.51
RFC4-208ENST00000447345 OR1E3Q8WZA6 343 aa11.87□□□□□ -0.51
RFC4-208ENST00000447345 LRRC45Q96CN5 670 aa11.87□□□□□ -0.51
RFC4-208ENST00000447345 RTP4Q96DX8 246 aa11.87□□□□□ -0.51
RFC4-208ENST00000447345 PPP1R2P1Q96PQ5 205 aa11.87□□□□□ -0.51
RFC4-208ENST00000447345 SLC13A1Q9BZW2 595 aa11.87□□□□□ -0.51
RFC4-208ENST00000447345 FAM83DQ9H4H8 585 aa11.87□□□□□ -0.51
RFC4-208ENST00000447345 KCTD5Q9NXV2 234 aa11.87□□□□□ -0.51
RFC4-208ENST00000447345 SNX12Q9UMY4 172 aa11.87□□□□□ -0.51
RFC4-208ENST00000447345 MED19A0JLT2 244 aaPredicted RBP11.86□□□□□ -0.51
RFC4-208ENST00000447345 FADS2P1A8MWK0 482 aa11.86□□□□□ -0.51
RFC4-208ENST00000447345 E7EVH7 732 aa11.86□□□□□ -0.51
RFC4-208ENST00000447345 AQP9O43315 295 aa11.86□□□□□ -0.51
RFC4-208ENST00000447345 CBFA2T3O75081 653 aa11.86□□□□□ -0.51
RFC4-208ENST00000447345 EPOP01588 193 aa11.86□□□□□ -0.51
RFC4-208ENST00000447345 CTSEP14091 401 aa11.86□□□□□ -0.51
RFC4-208ENST00000447345 BPIP17213 487 aa11.86□□□□□ -0.51
RFC4-208ENST00000447345 KELP23276 732 aa11.86□□□□□ -0.51
RFC4-208ENST00000447345 STIP1P31948 543 aaKnown RBP11.86□□□□□ -0.51
RFC4-208ENST00000447345 ADRA1AP35348 466 aa11.86□□□□□ -0.51
RFC4-208ENST00000447345 TRIM23P36406 574 aa11.86□□□□□ -0.51
RFC4-208ENST00000447345 POLD2P49005 469 aa11.86□□□□□ -0.51
RFC4-208ENST00000447345 LMAN1P49257 510 aa11.86□□□□□ -0.51
RFC4-208ENST00000447345 TERF1P54274 439 aa11.86□□□□□ -0.51
RFC4-208ENST00000447345 DPTQ07507 201 aa11.86□□□□□ -0.51
RFC4-208ENST00000447345 PTPRCAPQ14761 206 aa11.86□□□□□ -0.51
RFC4-208ENST00000447345 TRIP13Q15645 432 aaPredicted RBP11.86□□□□□ -0.51
RFC4-208ENST00000447345 TRIP6Q15654 476 aaKnown RBP11.86□□□□□ -0.51
RFC4-208ENST00000447345 DEFB133Q30KQ1 61 aa11.86□□□□□ -0.51
RFC4-208ENST00000447345 HENMT1Q5T8I9 393 aaKnown RBP11.86□□□□□ -0.51
RFC4-208ENST00000447345 N4BP2L1Q5TBK1 243 aaPredicted RBP11.86□□□□□ -0.51
RFC4-208ENST00000447345 ADAMTSL4Q6UY14 1074 aa11.86□□□□□ -0.51
RFC4-208ENST00000447345 DBX2Q6ZNG2 339 aa11.86□□□□□ -0.51
RFC4-208ENST00000447345 MARK2Q7KZI7 788 aaKnown RBP11.86□□□□□ -0.51
RFC4-208ENST00000447345 RASGEF1CQ8N431 466 aa11.86□□□□□ -0.51
RFC4-208ENST00000447345 TTC30BQ8N4P2 665 aa11.86□□□□□ -0.51
RFC4-208ENST00000447345 GPR26Q8NDV2 337 aa11.86□□□□□ -0.51
RFC4-208ENST00000447345 BAHD1Q8TBE0 780 aaPredicted RBP11.86□□□□□ -0.51
RFC4-208ENST00000447345 PTCD2Q8WV60 388 aaKnown RBP11.86□□□□□ -0.51
RFC4-208ENST00000447345 CNDP2Q96KP4 475 aaKnown RBP11.86□□□□□ -0.51
RFC4-208ENST00000447345 CAPZA3Q96KX2 299 aa11.86□□□□□ -0.51
RFC4-208ENST00000447345 SPATA16Q9BXB7 569 aa11.86□□□□□ -0.51
RFC4-208ENST00000447345 TEX101Q9BY14 249 aa11.86□□□□□ -0.51
RFC4-208ENST00000447345 LRRC40Q9H9A6 602 aa11.86□□□□□ -0.51
RFC4-208ENST00000447345 CYP4F12Q9HCS2 524 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms