RNA–Protein interactions for RNA: ENST00000442515.5

LINC00642-202, long intergenic non-protein coding RNA 642, humanhuman

TSL 3 BASIC

Gene LINC00642, Length 670 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-202ENST00000442515 PCDHGA6Q9Y5G7 932 aa13.87□□□□□ -0.19
LINC00642-202ENST00000442515 F8P00451 2351 aa13.86□□□□□ -0.19
LINC00642-202ENST00000442515 A6NCN8 305 aa13.86□□□□□ -0.19
LINC00642-202ENST00000442515 GOLGA6CA6NDK9 693 aa13.86□□□□□ -0.19
LINC00642-202ENST00000442515 GOLGA6BA6NDN3 693 aa13.86□□□□□ -0.19
LINC00642-202ENST00000442515 J3KR12 359 aa13.86□□□□□ -0.19
LINC00642-202ENST00000442515 EML2O95834 649 aa13.86□□□□□ -0.19
LINC00642-202ENST00000442515 GOLGA6DP0CG33 693 aa13.86□□□□□ -0.19
LINC00642-202ENST00000442515 SDC4P31431 198 aa13.86□□□□□ -0.19
LINC00642-202ENST00000442515 STX17P56962 302 aa13.86□□□□□ -0.19
LINC00642-202ENST00000442515 BCL2L1Q07817 233 aa13.86□□□□□ -0.19
LINC00642-202ENST00000442515 CHAF1BQ13112 559 aa13.86□□□□□ -0.19
LINC00642-202ENST00000442515 CNGA3Q16281 694 aa13.86□□□□□ -0.19
LINC00642-202ENST00000442515 EXOC3L4Q17RC7 722 aa13.86□□□□□ -0.19
LINC00642-202ENST00000442515 TAF3Q5VWG9 929 aa13.86□□□□□ -0.19
LINC00642-202ENST00000442515 RAET1GQ6H3X3 334 aa13.86□□□□□ -0.19
LINC00642-202ENST00000442515 GBP6Q6ZN66 633 aa13.86□□□□□ -0.19
LINC00642-202ENST00000442515 LYSMD3Q7Z3D4 306 aa13.86□□□□□ -0.19
LINC00642-202ENST00000442515 SRLQ86TD4 932 aa13.86□□□□□ -0.19
LINC00642-202ENST00000442515 PYROXD2Q8N2H3 581 aa13.86□□□□□ -0.19
LINC00642-202ENST00000442515 Q8NA96 180 aa13.86□□□□□ -0.19
LINC00642-202ENST00000442515 RXFP2Q8WXD0 754 aa13.86□□□□□ -0.19
LINC00642-202ENST00000442515 SNX21Q969T3 373 aa13.86□□□□□ -0.19
LINC00642-202ENST00000442515 MOCOSQ96EN8 888 aa13.86□□□□□ -0.19
LINC00642-202ENST00000442515 DTD2Q96FN9 168 aa13.86□□□□□ -0.19
LINC00642-202ENST00000442515 GDPD2Q9HCC8 539 aa13.86□□□□□ -0.19
LINC00642-202ENST00000442515 MLXIPLQ9NP71 852 aa13.86□□□□□ -0.19
LINC00642-202ENST00000442515 GOLGA6AQ9NYA3 693 aa13.86□□□□□ -0.19
LINC00642-202ENST00000442515 MAP10Q9P2G4 905 aa13.86□□□□□ -0.19
LINC00642-202ENST00000442515 DNAJC12Q9UKB3 198 aa13.86□□□□□ -0.19
LINC00642-202ENST00000442515 PCDHGA9Q9Y5G4 932 aaKnown RBP13.86□□□□□ -0.19
LINC00642-202ENST00000442515 ZNF106Q9H2Y7 1883 aaKnown RBP13.85□□□□□ -0.19
LINC00642-202ENST00000442515 PPP1R3GB7ZBB8 358 aa13.85□□□□□ -0.19
LINC00642-202ENST00000442515 TRAFD1O14545 582 aaPredicted RBP13.85□□□□□ -0.19
LINC00642-202ENST00000442515 KIAA0754O94854 1291 aa13.85□□□□□ -0.19
LINC00642-202ENST00000442515 RECKO95980 971 aa13.85□□□□□ -0.19
LINC00642-202ENST00000442515 ANKRD34CP0C6C1 535 aa13.85□□□□□ -0.19
LINC00642-202ENST00000442515 PRF1P14222 555 aa13.85□□□□□ -0.19
LINC00642-202ENST00000442515 CYP11B1P15538 503 aa13.85□□□□□ -0.19
LINC00642-202ENST00000442515 PON1P27169 355 aa13.85□□□□□ -0.19
LINC00642-202ENST00000442515 ETV3P41162 512 aa13.85□□□□□ -0.19
LINC00642-202ENST00000442515 CSNK1DP48730 415 aa13.85□□□□□ -0.19
LINC00642-202ENST00000442515 HDAC4P56524 1084 aa13.85□□□□□ -0.19
LINC00642-202ENST00000442515 POLR2LP62875 67 aaKnown RBP13.85□□□□□ -0.19
LINC00642-202ENST00000442515 DNASE1L3Q13609 305 aa13.85□□□□□ -0.19
LINC00642-202ENST00000442515 PAPD7Q5XG87 772 aaKnown RBP13.85□□□□□ -0.19
LINC00642-202ENST00000442515 DENND2CQ68D51 928 aa13.85□□□□□ -0.19
LINC00642-202ENST00000442515 SMYD5Q6GMV2 418 aa13.85□□□□□ -0.19
LINC00642-202ENST00000442515 STRADAQ7RTN6 431 aa13.85□□□□□ -0.19
LINC00642-202ENST00000442515 FAM71AQ8IYT1 594 aa13.85□□□□□ -0.19
LINC00642-202ENST00000442515 UMODL1-AS1Q8N2C9 162 aa13.85□□□□□ -0.19
LINC00642-202ENST00000442515 TSEN2Q8NCE0 465 aaKnown RBP13.85□□□□□ -0.19
LINC00642-202ENST00000442515 MSANTD4Q8NCY6 345 aa13.85□□□□□ -0.19
LINC00642-202ENST00000442515 GPT2Q8TD30 523 aa13.85□□□□□ -0.19
LINC00642-202ENST00000442515 FNIP1Q8TF40 1166 aa13.85□□□□□ -0.19
LINC00642-202ENST00000442515 NTAN1Q96AB6 310 aa13.85□□□□□ -0.19
LINC00642-202ENST00000442515 SCARF2Q96GP6 870 aaPredicted RBP13.85□□□□□ -0.19
LINC00642-202ENST00000442515 C5orf34Q96MH7 638 aa13.85□□□□□ -0.19
LINC00642-202ENST00000442515 SARS2Q9NP81 518 aaKnown RBP13.85□□□□□ -0.19
LINC00642-202ENST00000442515 SIX2Q9NPC8 291 aa13.85□□□□□ -0.19
LINC00642-202ENST00000442515 LNPEPQ9UIQ6 1025 aa13.85□□□□□ -0.19
LINC00642-202ENST00000442515 SLC5A6Q9Y289 635 aa13.85□□□□□ -0.19
LINC00642-202ENST00000442515 MN1Q10571 1320 aaPredicted RBP13.85□□□□□ -0.19
LINC00642-202ENST00000442515 C2CD4BA6NLJ0 364 aa13.84□□□□□ -0.19
LINC00642-202ENST00000442515 WASH4PA8MWX3 477 aa13.84□□□□□ -0.19
LINC00642-202ENST00000442515 PRAMEF11O60813 436 aa13.84□□□□□ -0.19
LINC00642-202ENST00000442515 HEXIM1O94992 359 aaKnown RBP13.84□□□□□ -0.19
LINC00642-202ENST00000442515 NDUFA10O95299 355 aa13.84□□□□□ -0.19
LINC00642-202ENST00000442515 LSM8O95777 96 aaKnown RBP13.84□□□□□ -0.19
LINC00642-202ENST00000442515 TEAD1P28347 426 aa13.84□□□□□ -0.19
LINC00642-202ENST00000442515 GARSP41250 739 aaKnown RBP13.84□□□□□ -0.19
LINC00642-202ENST00000442515 EPHA4P54764 986 aa13.84□□□□□ -0.19
LINC00642-202ENST00000442515 GFERP55789 205 aa13.84□□□□□ -0.19
LINC00642-202ENST00000442515 BPIFB4P59827 614 aa13.84□□□□□ -0.19
LINC00642-202ENST00000442515 SH3BP2P78314 561 aa13.84□□□□□ -0.19
LINC00642-202ENST00000442515 NR6A1Q15406 480 aa13.84□□□□□ -0.19
LINC00642-202ENST00000442515 JMJD6Q6NYC1 403 aaPredicted RBP13.84□□□□□ -0.19
LINC00642-202ENST00000442515 MARK2Q7KZI7 788 aaKnown RBP13.84□□□□□ -0.19
LINC00642-202ENST00000442515 HSD11B1LQ7Z5J1 315 aa13.84□□□□□ -0.19
LINC00642-202ENST00000442515 JOSD2Q8TAC2 188 aa13.84□□□□□ -0.19
LINC00642-202ENST00000442515 CT55Q8WUE5 264 aa13.84□□□□□ -0.19
LINC00642-202ENST00000442515 FAM172AQ8WUF8 416 aa13.84□□□□□ -0.19
LINC00642-202ENST00000442515 CPA5Q8WXQ8 436 aa13.84□□□□□ -0.19
LINC00642-202ENST00000442515 NSMCE3Q96MG7 304 aa13.84□□□□□ -0.19
LINC00642-202ENST00000442515 ACTL8Q9H568 366 aa13.84□□□□□ -0.19
LINC00642-202ENST00000442515 STN1Q9H668 368 aaKnown RBP13.84□□□□□ -0.19
LINC00642-202ENST00000442515 SLAMF7Q9NQ25 335 aa13.84□□□□□ -0.19
LINC00642-202ENST00000442515 TMEM98Q9Y2Y6 226 aa13.84□□□□□ -0.19
LINC00642-202ENST00000442515 ZDHHC9Q9Y397 364 aa13.84□□□□□ -0.19
LINC00642-202ENST00000442515 APCP25054 2843 aa13.83□□□□□ -0.19
LINC00642-202ENST00000442515 CREB3O43889 395 aa13.83□□□□□ -0.2
LINC00642-202ENST00000442515 LRCH4O75427 683 aa13.83□□□□□ -0.2
LINC00642-202ENST00000442515 PALMO75781 387 aa13.83□□□□□ -0.2
LINC00642-202ENST00000442515 VIPR1P32241 457 aa13.83□□□□□ -0.2
LINC00642-202ENST00000442515 PTPN9P43378 593 aa13.83□□□□□ -0.2
LINC00642-202ENST00000442515 NDST2P52849 883 aa13.83□□□□□ -0.2
LINC00642-202ENST00000442515 NOMO3P69849 1222 aa13.83□□□□□ -0.2
LINC00642-202ENST00000442515 PAK1Q13153 545 aa13.83□□□□□ -0.2
LINC00642-202ENST00000442515 LRP8Q14114 963 aa13.83□□□□□ -0.2
LINC00642-202ENST00000442515 PYCR3Q53H96 274 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms