RNA–Protein interactions for RNA: ENST00000440556.1

LINC02048-201, Transcript of long intergenic non-protein coding RNA 2048, humanhuman

TSL 5 BASIC

Gene LINC02048, Length 1,771 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02048-201ENST00000440556 ZNF404Q494X3 552 aa13.71□□□□□ -0.22
LINC02048-201ENST00000440556 SH3PXD2AQ5TCZ1 1133 aa13.71□□□□□ -0.22
LINC02048-201ENST00000440556 APOBEC3HQ6NTF7 200 aaKnown RBP13.71□□□□□ -0.22
LINC02048-201ENST00000440556 CNSTQ6PJW8 725 aa13.71□□□□□ -0.22
LINC02048-201ENST00000440556 LARP4Q71RC2 724 aaKnown RBP eCLIP13.71□□□□□ -0.22
LINC02048-201ENST00000440556 STRADAQ7RTN6 431 aa13.71□□□□□ -0.22
LINC02048-201ENST00000440556 RALGPS2Q86X27 583 aaPredicted RBP13.71□□□□□ -0.22
LINC02048-201ENST00000440556 FUNDC1Q8IVP5 155 aa13.71□□□□□ -0.22
LINC02048-201ENST00000440556 RIMKLAQ8IXN7 391 aa13.71□□□□□ -0.22
LINC02048-201ENST00000440556 UBQLNLQ8IYU4 475 aa13.71□□□□□ -0.22
LINC02048-201ENST00000440556 SVOPLQ8N434 492 aa13.71□□□□□ -0.22
LINC02048-201ENST00000440556 CCDC185Q8N715 623 aa13.71□□□□□ -0.22
LINC02048-201ENST00000440556 NXNL1Q96CM4 212 aa13.71□□□□□ -0.22
LINC02048-201ENST00000440556 ATXN7L3BQ96GX2 97 aa13.71□□□□□ -0.22
LINC02048-201ENST00000440556 ASB2Q96Q27 587 aa13.71□□□□□ -0.22
LINC02048-201ENST00000440556 SLC30A3Q99726 388 aa13.71□□□□□ -0.22
LINC02048-201ENST00000440556 AIFM2Q9BRQ8 373 aa13.71□□□□□ -0.22
LINC02048-201ENST00000440556 FAM124BQ9H5Z6 455 aaPredicted RBP13.71□□□□□ -0.22
LINC02048-201ENST00000440556 SOX17Q9H6I2 414 aaPredicted RBP13.71□□□□□ -0.22
LINC02048-201ENST00000440556 GIMAP4Q9NUV9 329 aa13.71□□□□□ -0.22
LINC02048-201ENST00000440556 RCOR3Q9P2K3 495 aaPredicted RBP13.71□□□□□ -0.22
LINC02048-201ENST00000440556 XPR1Q9UBH6 696 aa13.71□□□□□ -0.22
LINC02048-201ENST00000440556 TPRKBQ9Y3C4 175 aa13.71□□□□□ -0.22
LINC02048-201ENST00000440556 HES2Q9Y543 173 aa13.71□□□□□ -0.22
LINC02048-201ENST00000440556 SRCAPQ6ZRS2 3230 aa13.7□□□□□ -0.22
LINC02048-201ENST00000440556 A0A0J9YYE9 177 aa13.7□□□□□ -0.22
LINC02048-201ENST00000440556 TMEM233B4DJY2 109 aa13.7□□□□□ -0.22
LINC02048-201ENST00000440556 CDK2AP1O14519 115 aa13.7□□□□□ -0.22
LINC02048-201ENST00000440556 CNTN5O94779 1100 aa13.7□□□□□ -0.22
LINC02048-201ENST00000440556 YES1P07947 543 aa13.7□□□□□ -0.22
LINC02048-201ENST00000440556 SLC35E2BP0CK96 405 aa13.7□□□□□ -0.22
LINC02048-201ENST00000440556 HTR3AP46098 478 aa13.7□□□□□ -0.22
LINC02048-201ENST00000440556 AP2S1P53680 142 aaPredicted RBP13.7□□□□□ -0.22
LINC02048-201ENST00000440556 OR2B6P58173 313 aa13.7□□□□□ -0.22
LINC02048-201ENST00000440556 PTPN11Q06124 597 aaPredicted RBP13.7□□□□□ -0.22
LINC02048-201ENST00000440556 GRM3Q14832 879 aa13.7□□□□□ -0.22
LINC02048-201ENST00000440556 FXNQ16595 210 aa13.7□□□□□ -0.22
LINC02048-201ENST00000440556 PITRM1Q5JRX3 1037 aa13.7□□□□□ -0.22
LINC02048-201ENST00000440556 GJC2Q5T442 439 aaPredicted RBP13.7□□□□□ -0.22
LINC02048-201ENST00000440556 OR6B2Q6IFH4 312 aa13.7□□□□□ -0.22
LINC02048-201ENST00000440556 TBPL2Q6SJ96 375 aa13.7□□□□□ -0.22
LINC02048-201ENST00000440556 RETREG3Q86VR2 466 aa13.7□□□□□ -0.22
LINC02048-201ENST00000440556 SLC38A6Q8IZM9 456 aa13.7□□□□□ -0.22
LINC02048-201ENST00000440556 MIER2Q8N344 545 aa13.7□□□□□ -0.22
LINC02048-201ENST00000440556 KCTD4Q8WVF5 259 aa13.7□□□□□ -0.22
LINC02048-201ENST00000440556 RIPOR3Q96MK2 946 aa13.7□□□□□ -0.22
LINC02048-201ENST00000440556 AGAP2Q99490 1192 aa13.7□□□□□ -0.22
LINC02048-201ENST00000440556 BCO2Q9BYV7 579 aa13.7□□□□□ -0.22
LINC02048-201ENST00000440556 ZC3H12CQ9C0D7 883 aaKnown RBP13.7□□□□□ -0.22
LINC02048-201ENST00000440556 ALG2Q9H553 416 aa13.7□□□□□ -0.22
LINC02048-201ENST00000440556 POMKQ9H5K3 350 aa13.7□□□□□ -0.22
LINC02048-201ENST00000440556 KAT8Q9H7Z6 458 aaKnown RBP13.7□□□□□ -0.22
LINC02048-201ENST00000440556 CHRAC1Q9NRG0 131 aa13.7□□□□□ -0.22
LINC02048-201ENST00000440556 RABL2AQ9UBK7 228 aaPredicted RBP13.7□□□□□ -0.22
LINC02048-201ENST00000440556 MKLN1Q9UL63 735 aa13.7□□□□□ -0.22
LINC02048-201ENST00000440556 KIAA1257Q9ULG3 409 aa13.7□□□□□ -0.22
LINC02048-201ENST00000440556 VANGL2Q9ULK5 521 aa13.7□□□□□ -0.22
LINC02048-201ENST00000440556 PCDHB3Q9Y5E6 796 aa13.7□□□□□ -0.22
LINC02048-201ENST00000440556 PCDHGA8Q9Y5G5 932 aa13.7□□□□□ -0.22
LINC02048-201ENST00000440556 DOCK5Q9H7D0 1870 aa13.7□□□□□ -0.22
LINC02048-201ENST00000440556 CCDC154A6NI56 674 aa13.69□□□□□ -0.22
LINC02048-201ENST00000440556 STBD1O95210 358 aa13.69□□□□□ -0.22
LINC02048-201ENST00000440556 NPPAP01160 153 aa13.69□□□□□ -0.22
LINC02048-201ENST00000440556 TNNC2P02585 160 aa13.69□□□□□ -0.22
LINC02048-201ENST00000440556 IL7RP16871 459 aa13.69□□□□□ -0.22
LINC02048-201ENST00000440556 HOXD10P28358 340 aa13.69□□□□□ -0.22
LINC02048-201ENST00000440556 S100A5P33763 92 aa13.69□□□□□ -0.22
LINC02048-201ENST00000440556 ETV3P41162 512 aa13.69□□□□□ -0.22
LINC02048-201ENST00000440556 GSK3BP49841 420 aa13.69□□□□□ -0.22
LINC02048-201ENST00000440556 RAB10P61026 200 aa13.69□□□□□ -0.22
LINC02048-201ENST00000440556 EMX1Q04741 257 aaPredicted RBP13.69□□□□□ -0.22
LINC02048-201ENST00000440556 TRAF3Q13114 568 aa13.69□□□□□ -0.22
LINC02048-201ENST00000440556 TARDBPQ13148 414 aaKnown RBP eCLIP13.69□□□□□ -0.22
LINC02048-201ENST00000440556 CARTPTQ16568 116 aa13.69□□□□□ -0.22
LINC02048-201ENST00000440556 CDO1Q16878 200 aa13.69□□□□□ -0.22
LINC02048-201ENST00000440556 SMU1Q2TAY7 513 aa13.69□□□□□ -0.22
LINC02048-201ENST00000440556 RFX4Q33E94 735 aa13.69□□□□□ -0.22
LINC02048-201ENST00000440556 ZIK1Q3SY52 487 aaPredicted RBP13.69□□□□□ -0.22
LINC02048-201ENST00000440556 CATSPEREQ5SY80 951 aa13.69□□□□□ -0.22
LINC02048-201ENST00000440556 TMEM236Q5W0B7 351 aa13.69□□□□□ -0.22
LINC02048-201ENST00000440556 BSPRYQ5W0U4 402 aa13.69□□□□□ -0.22
LINC02048-201ENST00000440556 CCSAPQ6IQ19 270 aaPredicted RBP13.69□□□□□ -0.22
LINC02048-201ENST00000440556 XRRA1Q6P2D8 792 aa13.69□□□□□ -0.22
LINC02048-201ENST00000440556 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.69□□□□□ -0.22
LINC02048-201ENST00000440556 ZPBP2Q6X784 338 aa13.69□□□□□ -0.22
LINC02048-201ENST00000440556 CUZD1Q86UP6 607 aa13.69□□□□□ -0.22
LINC02048-201ENST00000440556 ZDHHC13Q8IUH4 622 aa13.69□□□□□ -0.22
LINC02048-201ENST00000440556 PSTKQ8IV42 348 aaKnown RBP13.69□□□□□ -0.22
LINC02048-201ENST00000440556 SLC22A9Q8IVM8 553 aa13.69□□□□□ -0.22
LINC02048-201ENST00000440556 RAVER1Q8IY67 606 aaKnown RBP13.69□□□□□ -0.22
LINC02048-201ENST00000440556 FAM109AQ8N4B1 249 aa13.69□□□□□ -0.22
LINC02048-201ENST00000440556 AADATQ8N5Z0 425 aa13.69□□□□□ -0.22
LINC02048-201ENST00000440556 FLAD1Q8NFF5 587 aa13.69□□□□□ -0.22
LINC02048-201ENST00000440556 TOR1AIP2Q8NFQ8 470 aa13.69□□□□□ -0.22
LINC02048-201ENST00000440556 SETD6Q8TBK2 473 aa13.69□□□□□ -0.22
LINC02048-201ENST00000440556 TMEM125Q96AQ2 219 aa13.69□□□□□ -0.22
LINC02048-201ENST00000440556 BIRC7Q96CA5 298 aa13.69□□□□□ -0.22
LINC02048-201ENST00000440556 LGALS12Q96DT0 336 aa13.69□□□□□ -0.22
LINC02048-201ENST00000440556 VPS35Q96QK1 796 aa13.69□□□□□ -0.22
LINC02048-201ENST00000440556 TOR3AQ9H497 397 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms