RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 CMTM5Q96DZ9 223 aa25.63■■□□□ 1.69
CPNE1-216ENST00000437340 FAR2Q96K12 515 aa25.63■■□□□ 1.69
CPNE1-216ENST00000437340 TFB2MQ9H5Q4 396 aaKnown RBP25.63■■□□□ 1.69
CPNE1-216ENST00000437340 ACSS2Q9NR19 701 aa25.63■■□□□ 1.69
CPNE1-216ENST00000437340 TLR9Q9NR96 1032 aa25.63■■□□□ 1.69
CPNE1-216ENST00000437340 PLK2Q9NYY3 685 aa25.63■■□□□ 1.69
CPNE1-216ENST00000437340 IL17CQ9P0M4 197 aa25.63■■□□□ 1.69
CPNE1-216ENST00000437340 PKP3Q9Y446 797 aa25.63■■□□□ 1.69
CPNE1-216ENST00000437340 ZNF711Q9Y462 761 aa25.63■■□□□ 1.69
CPNE1-216ENST00000437340 ANKRD36A6QL64 1941 aa25.62■■□□□ 1.69
CPNE1-216ENST00000437340 HTRA2O43464 458 aaPredicted RBP25.62■■□□□ 1.69
CPNE1-216ENST00000437340 SMAD6O43541 496 aaKnown RBP25.62■■□□□ 1.69
CPNE1-216ENST00000437340 SRP72O76094 671 aaKnown RBP25.62■■□□□ 1.69
CPNE1-216ENST00000437340 IMPDH1P20839 514 aa25.62■■□□□ 1.69
CPNE1-216ENST00000437340 KCNA5P22460 613 aa25.62■■□□□ 1.69
CPNE1-216ENST00000437340 CCR2P41597 374 aa25.62■■□□□ 1.69
CPNE1-216ENST00000437340 CPA2P48052 419 aa25.62■■□□□ 1.69
CPNE1-216ENST00000437340 BCL2L1Q07817 233 aa25.62■■□□□ 1.69
CPNE1-216ENST00000437340 SHKBP1Q8TBC3 707 aa25.62■■□□□ 1.69
CPNE1-216ENST00000437340 L3HYPDHQ96EM0 354 aa25.62■■□□□ 1.69
CPNE1-216ENST00000437340 LMLNQ96KR4 655 aa25.62■■□□□ 1.69
CPNE1-216ENST00000437340 TM6SF2Q9BZW4 377 aa25.62■■□□□ 1.69
CPNE1-216ENST00000437340 CLEC4EQ9ULY5 219 aa25.62■■□□□ 1.69
CPNE1-216ENST00000437340 CDYLQ9Y232 598 aa25.62■■□□□ 1.69
CPNE1-216ENST00000437340 COMMD10Q9Y6G5 202 aa25.62■■□□□ 1.69
CPNE1-216ENST00000437340 TRPC5OSA6NMA1 111 aa25.61■■□□□ 1.69
CPNE1-216ENST00000437340 GRM6O15303 877 aa25.61■■□□□ 1.69
CPNE1-216ENST00000437340 ZBTB14O43829 449 aa25.61■■□□□ 1.69
CPNE1-216ENST00000437340 SMIM24O75264 130 aa25.61■■□□□ 1.69
CPNE1-216ENST00000437340 TPBGLP0DKB5 382 aa25.61■■□□□ 1.69
CPNE1-216ENST00000437340 PTPN2P17706 415 aa25.61■■□□□ 1.69
CPNE1-216ENST00000437340 SP100P23497 879 aaPredicted RBP25.61■■□□□ 1.69
CPNE1-216ENST00000437340 CD70P32970 193 aa25.61■■□□□ 1.69
CPNE1-216ENST00000437340 PBX2P40425 430 aa25.61■■□□□ 1.69
CPNE1-216ENST00000437340 ADARP55265 1226 aaKnown RBP25.61■■□□□ 1.69
CPNE1-216ENST00000437340 UBE3AQ05086 875 aa25.61■■□□□ 1.69
CPNE1-216ENST00000437340 PEX6Q13608 980 aa25.61■■□□□ 1.69
CPNE1-216ENST00000437340 CMTM8Q8IZV2 173 aa25.61■■□□□ 1.69
CPNE1-216ENST00000437340 AFAP1L2Q8N4X5 818 aa25.61■■□□□ 1.69
CPNE1-216ENST00000437340 PTERQ96BW5 349 aa25.61■■□□□ 1.69
CPNE1-216ENST00000437340 OR52B2Q96RD2 323 aa25.61■■□□□ 1.69
CPNE1-216ENST00000437340 CD248Q9HCU0 757 aa25.61■■□□□ 1.69
CPNE1-216ENST00000437340 MAN1C1Q9NR34 630 aa25.61■■□□□ 1.69
CPNE1-216ENST00000437340 MED16Q9Y2X0 877 aa25.61■■□□□ 1.69
CPNE1-216ENST00000437340 SLC22A2O15244 555 aa25.61■■□□□ 1.69
CPNE1-216ENST00000437340 IGSF6O95976 241 aa25.61■■□□□ 1.69
CPNE1-216ENST00000437340 PYGLP06737 847 aa25.61■■□□□ 1.69
CPNE1-216ENST00000437340 FMO4P31512 558 aa25.61■■□□□ 1.69
CPNE1-216ENST00000437340 PGM1P36871 562 aa25.61■■□□□ 1.69
CPNE1-216ENST00000437340 RAP1GDS1P52306 607 aa25.61■■□□□ 1.69
CPNE1-216ENST00000437340 CAMK1Q14012 370 aa25.61■■□□□ 1.69
CPNE1-216ENST00000437340 FRMD7Q6ZUT3 714 aa25.61■■□□□ 1.69
CPNE1-216ENST00000437340 CAMK1DQ8IU85 385 aa25.61■■□□□ 1.69
CPNE1-216ENST00000437340 GDF15Q99988 308 aa25.61■■□□□ 1.69
CPNE1-216ENST00000437340 GPR63Q9BZJ6 419 aa25.61■■□□□ 1.69
CPNE1-216ENST00000437340 DERL2Q9GZP9 239 aa25.61■■□□□ 1.69
CPNE1-216ENST00000437340 DENND2DQ9H6A0 471 aaPredicted RBP25.61■■□□□ 1.69
CPNE1-216ENST00000437340 CYP4F12Q9HCS2 524 aa25.61■■□□□ 1.69
CPNE1-216ENST00000437340 INTS6Q9UL03 887 aaKnown RBP25.61■■□□□ 1.69
CPNE1-216ENST00000437340 E9PBE3 544 aa25.6■■□□□ 1.69
CPNE1-216ENST00000437340 KLHL41O60662 606 aa25.6■■□□□ 1.69
CPNE1-216ENST00000437340 RB1P06400 928 aa25.6■■□□□ 1.69
CPNE1-216ENST00000437340 HOXA9P31269 272 aa25.6■■□□□ 1.69
CPNE1-216ENST00000437340 COPAP53621 1224 aa25.6■■□□□ 1.69
CPNE1-216ENST00000437340 ATP6V0D1P61421 351 aa25.6■■□□□ 1.69
CPNE1-216ENST00000437340 XIAPP98170 497 aa25.6■■□□□ 1.69
CPNE1-216ENST00000437340 SATB1Q01826 763 aa25.6■■□□□ 1.69
CPNE1-216ENST00000437340 ARHGAP15Q53QZ3 475 aa25.6■■□□□ 1.69
CPNE1-216ENST00000437340 PSAPL1Q6NUJ1 521 aa25.6■■□□□ 1.69
CPNE1-216ENST00000437340 PIANPQ8IYJ0 282 aa25.6■■□□□ 1.69
CPNE1-216ENST00000437340 STK40Q8N2I9 435 aa25.6■■□□□ 1.69
CPNE1-216ENST00000437340 BIRC8Q96P09 236 aa25.6■■□□□ 1.69
CPNE1-216ENST00000437340 NUF2Q9BZD4 464 aa25.6■■□□□ 1.69
CPNE1-216ENST00000437340 ATP13A3Q9H7F0 1226 aa25.6■■□□□ 1.69
CPNE1-216ENST00000437340 HCFC1R1Q9NWW0 138 aa25.6■■□□□ 1.69
CPNE1-216ENST00000437340 EVLQ9UI08 416 aaPredicted RBP25.6■■□□□ 1.69
CPNE1-216ENST00000437340 PLA2G4CQ9UP65 541 aa25.6■■□□□ 1.69
CPNE1-216ENST00000437340 OAS3Q9Y6K5 1087 aaKnown RBP25.6■■□□□ 1.69
CPNE1-216ENST00000437340 MYO7AQ13402 2215 aa25.59■■□□□ 1.69
CPNE1-216ENST00000437340 CCDC189A1A4V9 331 aa25.59■■□□□ 1.69
CPNE1-216ENST00000437340 PKMP14618 531 aaKnown RBP25.59■■□□□ 1.69
CPNE1-216ENST00000437340 ADSLP30566 484 aaPredicted RBP25.59■■□□□ 1.69
CPNE1-216ENST00000437340 IRS1P35568 1242 aa25.59■■□□□ 1.69
CPNE1-216ENST00000437340 KCNC1P48547 511 aa25.59■■□□□ 1.69
CPNE1-216ENST00000437340 PTPRNQ16849 979 aa25.59■■□□□ 1.69
CPNE1-216ENST00000437340 LSM12Q3MHD2 195 aaKnown RBP25.59■■□□□ 1.69
CPNE1-216ENST00000437340 ZRANB3Q5FWF4 1079 aa25.59■■□□□ 1.69
CPNE1-216ENST00000437340 SH2D4BQ5SQS7 431 aa25.59■■□□□ 1.69
CPNE1-216ENST00000437340 LEMD2Q8NC56 503 aa25.59■■□□□ 1.69
CPNE1-216ENST00000437340 PHF21BQ96EK2 531 aa25.59■■□□□ 1.69
CPNE1-216ENST00000437340 MAELQ96JY0 434 aaKnown RBP25.59■■□□□ 1.69
CPNE1-216ENST00000437340 SMG9Q9H0W8 520 aaKnown RBP25.59■■□□□ 1.69
CPNE1-216ENST00000437340 A0A0J9YYE9 177 aa25.59■■□□□ 1.69
CPNE1-216ENST00000437340 DCXO43602 365 aa25.59■■□□□ 1.69
CPNE1-216ENST00000437340 TRBC1P01850 177 aa25.59■■□□□ 1.69
CPNE1-216ENST00000437340 PTGER3P43115 390 aa25.59■■□□□ 1.69
CPNE1-216ENST00000437340 CACNG1Q06432 222 aa25.59■■□□□ 1.69
CPNE1-216ENST00000437340 RAD51Q06609 339 aa25.59■■□□□ 1.69
CPNE1-216ENST00000437340 NAA25Q14CX7 972 aa25.59■■□□□ 1.69
CPNE1-216ENST00000437340 SETMARQ53H47 684 aaPredicted RBP25.59■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms