RNA–Protein interactions for RNA: ENST00000428104.2

PDE6D-203, Transcript of phosphodiesterase 6D, humanhuman

TSL 3

Gene PDE6D, Length 627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-203ENST00000428104 NEU3Q9UQ49 428 aa14.29□□□□□ -0.12
PDE6D-203ENST00000428104 HPSEQ9Y251 543 aa14.29□□□□□ -0.12
PDE6D-203ENST00000428104 ANKHD1Q8IWZ3 2542 aaKnown RBP14.29□□□□□ -0.12
PDE6D-203ENST00000428104 FAM170AA1A519 330 aa14.28□□□□□ -0.12
PDE6D-203ENST00000428104 HEATR9A2RTY3 570 aa14.28□□□□□ -0.12
PDE6D-203ENST00000428104 SPAG6O75602 509 aa14.28□□□□□ -0.12
PDE6D-203ENST00000428104 IVLP07476 585 aa14.28□□□□□ -0.12
PDE6D-203ENST00000428104 ANKRD34CP0C6C1 535 aa14.28□□□□□ -0.12
PDE6D-203ENST00000428104 FLT3P36888 993 aa14.28□□□□□ -0.12
PDE6D-203ENST00000428104 USP8P40818 1118 aa14.28□□□□□ -0.12
PDE6D-203ENST00000428104 SEPHS1P49903 392 aa14.28□□□□□ -0.12
PDE6D-203ENST00000428104 PER3P56645 1201 aa14.28□□□□□ -0.12
PDE6D-203ENST00000428104 CDK3Q00526 305 aa14.28□□□□□ -0.12
PDE6D-203ENST00000428104 RAB6CQ53S08 254 aa14.28□□□□□ -0.12
PDE6D-203ENST00000428104 FAM199XQ6PEV8 388 aaPredicted RBP14.28□□□□□ -0.12
PDE6D-203ENST00000428104 NUS1Q96E22 293 aa14.28□□□□□ -0.12
PDE6D-203ENST00000428104 COQ10AQ96MF6 247 aa14.28□□□□□ -0.12
PDE6D-203ENST00000428104 OR2M4Q96R27 311 aa14.28□□□□□ -0.12
PDE6D-203ENST00000428104 TBC1D10AQ9BXI6 508 aa14.28□□□□□ -0.12
PDE6D-203ENST00000428104 BRD8Q9H0E9 1235 aa14.28□□□□□ -0.12
PDE6D-203ENST00000428104 RAB6CQ9H0N0 254 aa14.28□□□□□ -0.12
PDE6D-203ENST00000428104 NOL6Q9H6R4 1146 aaKnown RBP14.28□□□□□ -0.12
PDE6D-203ENST00000428104 SLC17A4Q9Y2C5 497 aa14.28□□□□□ -0.12
PDE6D-203ENST00000428104 DIDO1Q9BTC0 2240 aaKnown RBP14.27□□□□□ -0.12
PDE6D-203ENST00000428104 MN1Q10571 1320 aaPredicted RBP14.27□□□□□ -0.12
PDE6D-203ENST00000428104 GOLGA6L3A6NEY3 463 aa14.27□□□□□ -0.13
PDE6D-203ENST00000428104 BECN2A8MW95 431 aa14.27□□□□□ -0.13
PDE6D-203ENST00000428104 ZNF185O15231 689 aa14.27□□□□□ -0.13
PDE6D-203ENST00000428104 PTPN4P29074 926 aa14.27□□□□□ -0.13
PDE6D-203ENST00000428104 RAPSNQ13702 412 aa14.27□□□□□ -0.13
PDE6D-203ENST00000428104 IL11RAQ14626 422 aa14.27□□□□□ -0.13
PDE6D-203ENST00000428104 GRM3Q14832 879 aa14.27□□□□□ -0.13
PDE6D-203ENST00000428104 FAM102AQ5T9C2 384 aaPredicted RBP14.27□□□□□ -0.13
PDE6D-203ENST00000428104 TRNP1Q6NT89 227 aa14.27□□□□□ -0.13
PDE6D-203ENST00000428104 MARK2Q7KZI7 788 aaKnown RBP14.27□□□□□ -0.13
PDE6D-203ENST00000428104 DPPA4Q7L190 304 aa14.27□□□□□ -0.13
PDE6D-203ENST00000428104 BNIPLQ7Z465 357 aa14.27□□□□□ -0.13
PDE6D-203ENST00000428104 FNIP1Q8TF40 1166 aa14.27□□□□□ -0.13
PDE6D-203ENST00000428104 SEC14L1Q92503 715 aa14.27□□□□□ -0.13
PDE6D-203ENST00000428104 CFAP57Q96MR6 1250 aa14.27□□□□□ -0.13
PDE6D-203ENST00000428104 SARS2Q9NP81 518 aaKnown RBP14.27□□□□□ -0.13
PDE6D-203ENST00000428104 PLCB1Q9NQ66 1216 aa14.27□□□□□ -0.13
PDE6D-203ENST00000428104 PCDHGC3Q9UN70 934 aa14.27□□□□□ -0.13
PDE6D-203ENST00000428104 NTNG1Q9Y2I2 539 aa14.27□□□□□ -0.13
PDE6D-203ENST00000428104 GOLGA6CA6NDK9 693 aa14.26□□□□□ -0.13
PDE6D-203ENST00000428104 GOLGA6BA6NDN3 693 aa14.26□□□□□ -0.13
PDE6D-203ENST00000428104 P4HA2O15460 535 aa14.26□□□□□ -0.13
PDE6D-203ENST00000428104 LRIG2O94898 1065 aa14.26□□□□□ -0.13
PDE6D-203ENST00000428104 TIAF1O95411 115 aa14.26□□□□□ -0.13
PDE6D-203ENST00000428104 PLEKP08567 350 aaPredicted RBP14.26□□□□□ -0.13
PDE6D-203ENST00000428104 GOLGA6DP0CG33 693 aa14.26□□□□□ -0.13
PDE6D-203ENST00000428104 CMA1P23946 247 aa14.26□□□□□ -0.13
PDE6D-203ENST00000428104 SYKP43405 635 aa14.26□□□□□ -0.13
PDE6D-203ENST00000428104 RGRP47804 291 aa14.26□□□□□ -0.13
PDE6D-203ENST00000428104 NDUFA8P51970 172 aa14.26□□□□□ -0.13
PDE6D-203ENST00000428104 SNX16P57768 344 aa14.26□□□□□ -0.13
PDE6D-203ENST00000428104 LAMB3Q13751 1172 aa14.26□□□□□ -0.13
PDE6D-203ENST00000428104 CCDC40Q4G0X9 1142 aa14.26□□□□□ -0.13
PDE6D-203ENST00000428104 GJB7Q6PEY0 223 aa14.26□□□□□ -0.13
PDE6D-203ENST00000428104 SPNS3Q6ZMD2 512 aa14.26□□□□□ -0.13
PDE6D-203ENST00000428104 SYVN1Q86TM6 617 aa14.26□□□□□ -0.13
PDE6D-203ENST00000428104 HPS6Q86YV9 775 aa14.26□□□□□ -0.13
PDE6D-203ENST00000428104 ZDHHC17Q8IUH5 632 aa14.26□□□□□ -0.13
PDE6D-203ENST00000428104 PLXDC1Q8IUK5 500 aa14.26□□□□□ -0.13
PDE6D-203ENST00000428104 C9orf72Q96LT7 481 aa14.26□□□□□ -0.13
PDE6D-203ENST00000428104 GOLGA6AQ9NYA3 693 aa14.26□□□□□ -0.13
PDE6D-203ENST00000428104 RCOR1Q9UKL0 485 aa14.26□□□□□ -0.13
PDE6D-203ENST00000428104 G3BP2Q9UN86 482 aaKnown RBP14.26□□□□□ -0.13
PDE6D-203ENST00000428104 OSGIN2Q9Y236 505 aa14.26□□□□□ -0.13
PDE6D-203ENST00000428104 TMEM98Q9Y2Y6 226 aa14.26□□□□□ -0.13
PDE6D-203ENST00000428104 COPG1Q9Y678 874 aaKnown RBP14.26□□□□□ -0.13
PDE6D-203ENST00000428104 RASA4BC9J798 803 aa14.25□□□□□ -0.13
PDE6D-203ENST00000428104 F5H423 210 aaPredicted RBP14.25□□□□□ -0.13
PDE6D-203ENST00000428104 RASA4O43374 803 aa14.25□□□□□ -0.13
PDE6D-203ENST00000428104 MT-ND3P03897 115 aa14.25□□□□□ -0.13
PDE6D-203ENST00000428104 SNRPB2P08579 225 aaKnown RBP14.25□□□□□ -0.13
PDE6D-203ENST00000428104 FGF5P12034 268 aa14.25□□□□□ -0.13
PDE6D-203ENST00000428104 HOXB4P17483 251 aaPredicted RBP14.25□□□□□ -0.13
PDE6D-203ENST00000428104 ITGA3P26006 1051 aa14.25□□□□□ -0.13
PDE6D-203ENST00000428104 EPHA4P54764 986 aa14.25□□□□□ -0.13
PDE6D-203ENST00000428104 ATP11AP98196 1134 aa14.25□□□□□ -0.13
PDE6D-203ENST00000428104 NRG1Q02297 640 aaPredicted RBP14.25□□□□□ -0.13
PDE6D-203ENST00000428104 DENND2CQ68D51 928 aa14.25□□□□□ -0.13
PDE6D-203ENST00000428104 PAF1Q8N7H5 531 aa14.25□□□□□ -0.13
PDE6D-203ENST00000428104 UBE2Q2Q8WVN8 375 aa14.25□□□□□ -0.13
PDE6D-203ENST00000428104 TBC1D31Q96DN5 1066 aa14.25□□□□□ -0.13
PDE6D-203ENST00000428104 SCARF2Q96GP6 870 aaPredicted RBP14.25□□□□□ -0.13
PDE6D-203ENST00000428104 TGM7Q96PF1 710 aa14.25□□□□□ -0.13
PDE6D-203ENST00000428104 TUBGCP5Q96RT8 1024 aa14.25□□□□□ -0.13
PDE6D-203ENST00000428104 GPR87Q9BY21 358 aa14.25□□□□□ -0.13
PDE6D-203ENST00000428104 SCAND2PQ9GZW5 306 aaPredicted RBP14.25□□□□□ -0.13
PDE6D-203ENST00000428104 RETREG1Q9H6L5 497 aa14.25□□□□□ -0.13
PDE6D-203ENST00000428104 ATP13A3Q9H7F0 1226 aa14.25□□□□□ -0.13
PDE6D-203ENST00000428104 GPR83Q9NYM4 423 aa14.25□□□□□ -0.13
PDE6D-203ENST00000428104 B4GALT6Q9UBX8 382 aa14.25□□□□□ -0.13
PDE6D-203ENST00000428104 SSU72P8A0A1W2PR75 194 aa14.24□□□□□ -0.13
PDE6D-203ENST00000428104 C9P02748 559 aa14.24□□□□□ -0.13
PDE6D-203ENST00000428104 SERPINA4P29622 427 aa14.24□□□□□ -0.13
PDE6D-203ENST00000428104 ADRA1BP35368 520 aa14.24□□□□□ -0.13
PDE6D-203ENST00000428104 ETV3P41162 512 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms