RNA–Protein interactions for RNA: ENST00000427157.1

LINC02541-201, Transcript of long intergenic non-protein coding RNA 2541, humanhuman

TSL 3 BASIC

Gene LINC02541, Length 327 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02541-201ENST00000427157 SAMD3Q8N6K7 520 aa3.27□□□□□ -1.89
LINC02541-201ENST00000427157 PCDH20Q8N6Y1 951 aaKnown RBP3.27□□□□□ -1.89
LINC02541-201ENST00000427157 ENAHQ8N8S7 591 aaPredicted RBP3.27□□□□□ -1.89
LINC02541-201ENST00000427157 PIGTQ969N2 578 aa3.27□□□□□ -1.89
LINC02541-201ENST00000427157 TKTL2Q9H0I9 626 aa3.27□□□□□ -1.89
LINC02541-201ENST00000427157 NDST4Q9H3R1 872 aa3.27□□□□□ -1.89
LINC02541-201ENST00000427157 BEX4Q9NWD9 120 aaPredicted RBP3.27□□□□□ -1.89
LINC02541-201ENST00000427157 TMEM160Q9NX00 188 aa3.27□□□□□ -1.89
LINC02541-201ENST00000427157 ZNF624Q9P2J8 865 aaPredicted RBP3.27□□□□□ -1.89
LINC02541-201ENST00000427157 TTC7AQ9ULT0 858 aaPredicted RBP3.27□□□□□ -1.89
LINC02541-201ENST00000427157 GOLGA6L10A0A0M3HER8 536 aa3.26□□□□□ -1.89
LINC02541-201ENST00000427157 CTAGE9A4FU28 777 aa3.26□□□□□ -1.89
LINC02541-201ENST00000427157 PCDH7O60245 1069 aa3.26□□□□□ -1.89
LINC02541-201ENST00000427157 FTCDO95954 541 aa3.26□□□□□ -1.89
LINC02541-201ENST00000427157 IGHV4-39P01824 125 aa3.26□□□□□ -1.89
LINC02541-201ENST00000427157 TFP02787 698 aa3.26□□□□□ -1.89
LINC02541-201ENST00000427157 CTAGE8P0CG41 777 aa3.26□□□□□ -1.89
LINC02541-201ENST00000427157 KRT2P35908 639 aa3.26□□□□□ -1.89
LINC02541-201ENST00000427157 GRK6P43250 576 aa3.26□□□□□ -1.89
LINC02541-201ENST00000427157 TERF1P54274 439 aa3.26□□□□□ -1.89
LINC02541-201ENST00000427157 GNB1P62873 340 aa3.26□□□□□ -1.89
LINC02541-201ENST00000427157 GAGE5Q13069 117 aa3.26□□□□□ -1.89
LINC02541-201ENST00000427157 GAGE6Q13070 117 aa3.26□□□□□ -1.89
LINC02541-201ENST00000427157 EFR3AQ14156 821 aa3.26□□□□□ -1.89
LINC02541-201ENST00000427157 PPP2R5BQ15173 497 aa3.26□□□□□ -1.89
LINC02541-201ENST00000427157 LPAL2Q16609 132 aa3.26□□□□□ -1.89
LINC02541-201ENST00000427157 FBXO47Q5MNV8 452 aa3.26□□□□□ -1.89
LINC02541-201ENST00000427157 MAP3K21Q5TCX8 1036 aa3.26□□□□□ -1.89
LINC02541-201ENST00000427157 SFMBT2Q5VUG0 894 aa3.26□□□□□ -1.89
LINC02541-201ENST00000427157 GGNBP1Q5YKI7 109 aa3.26□□□□□ -1.89
LINC02541-201ENST00000427157 TXNDC8Q6A555 127 aa3.26□□□□□ -1.89
LINC02541-201ENST00000427157 FAM171BQ6P995 826 aa3.26□□□□□ -1.89
LINC02541-201ENST00000427157 SLC27A1Q6PCB7 646 aa3.26□□□□□ -1.89
LINC02541-201ENST00000427157 CPLX2Q6PUV4 134 aaKnown RBP3.26□□□□□ -1.89
LINC02541-201ENST00000427157 ATF7IPQ6VMQ6 1270 aa3.26□□□□□ -1.89
LINC02541-201ENST00000427157 RAD9BQ6WBX8 426 aa3.26□□□□□ -1.89
LINC02541-201ENST00000427157 QSOX2Q6ZRP7 698 aa3.26□□□□□ -1.89
LINC02541-201ENST00000427157 CTAGE4Q8IX94 777 aa3.26□□□□□ -1.89
LINC02541-201ENST00000427157 TM9SF4Q92544 642 aa3.26□□□□□ -1.89
LINC02541-201ENST00000427157 ZNF599Q96NL3 588 aa3.26□□□□□ -1.89
LINC02541-201ENST00000427157 PYM1Q9BRP8 204 aaKnown RBP3.26□□□□□ -1.89
LINC02541-201ENST00000427157 UPF2Q9HAU5 1272 aaKnown RBP3.26□□□□□ -1.89
LINC02541-201ENST00000427157 ITM2CQ9NQX7 267 aa3.26□□□□□ -1.89
LINC02541-201ENST00000427157 SMAD5-AS1Q9Y6J3 95 aa3.26□□□□□ -1.89
LINC02541-201ENST00000427157 IGLV5-45A0A087WSX0 123 aa3.25□□□□□ -1.89
LINC02541-201ENST00000427157 SMIM1B2RUZ4 78 aa3.25□□□□□ -1.89
LINC02541-201ENST00000427157 ZNHIT1O43257 154 aa3.25□□□□□ -1.89
LINC02541-201ENST00000427157 CRLF1O75462 422 aa3.25□□□□□ -1.89
LINC02541-201ENST00000427157 BAG4O95429 457 aaKnown RBP3.25□□□□□ -1.89
LINC02541-201ENST00000427157 TRAPPC10P48553 1259 aa3.25□□□□□ -1.89
LINC02541-201ENST00000427157 ARL4CP56559 192 aa3.25□□□□□ -1.89
LINC02541-201ENST00000427157 SORDQ00796 357 aa3.25□□□□□ -1.89
LINC02541-201ENST00000427157 SLC1A5Q15758 541 aa3.25□□□□□ -1.89
LINC02541-201ENST00000427157 ZNF766Q5HY98 468 aa3.25□□□□□ -1.89
LINC02541-201ENST00000427157 WDR38Q5JTN6 314 aa3.25□□□□□ -1.89
LINC02541-201ENST00000427157 ATG16L1Q676U5 607 aa3.25□□□□□ -1.89
LINC02541-201ENST00000427157 OR7E24Q6IFN5 339 aa3.25□□□□□ -1.89
LINC02541-201ENST00000427157 ZNF280DQ6N043 979 aa3.25□□□□□ -1.89
LINC02541-201ENST00000427157 DUS1LQ6P1R4 473 aaKnown RBP3.25□□□□□ -1.89
LINC02541-201ENST00000427157 C15orf39Q6ZRI6 1047 aa3.25□□□□□ -1.89
LINC02541-201ENST00000427157 APLFQ8IW19 511 aaPredicted RBP3.25□□□□□ -1.89
LINC02541-201ENST00000427157 OR52I2Q8NH67 350 aa3.25□□□□□ -1.89
LINC02541-201ENST00000427157 OR5R1Q8NH85 324 aa3.25□□□□□ -1.89
LINC02541-201ENST00000427157 HMGCLL1Q8TB92 370 aa3.25□□□□□ -1.89
LINC02541-201ENST00000427157 SLC38A5Q8WUX1 472 aa3.25□□□□□ -1.89
LINC02541-201ENST00000427157 SCRN2Q96FV2 425 aa3.25□□□□□ -1.89
LINC02541-201ENST00000427157 LBHD1Q9BQE6 289 aaPredicted RBP3.25□□□□□ -1.89
LINC02541-201ENST00000427157 PLEKHA4Q9H4M7 779 aa3.25□□□□□ -1.89
LINC02541-201ENST00000427157 TFB2MQ9H5Q4 396 aaKnown RBP3.25□□□□□ -1.89
LINC02541-201ENST00000427157 SLC52A3Q9NQ40 469 aa3.25□□□□□ -1.89
LINC02541-201ENST00000427157 MAP3K20Q9NYL2 800 aaKnown RBP3.25□□□□□ -1.89
LINC02541-201ENST00000427157 HSF4Q9ULV5 492 aa3.25□□□□□ -1.89
LINC02541-201ENST00000427157 PADI3Q9ULW8 664 aa3.25□□□□□ -1.89
LINC02541-201ENST00000427157 ERVK-11Q9UQG0 969 aa3.25□□□□□ -1.89
LINC02541-201ENST00000427157 PTPRCP08575 1304 aa3.24□□□□□ -1.89
LINC02541-201ENST00000427157 POLR2CP19387 275 aaPredicted RBP3.24□□□□□ -1.89
LINC02541-201ENST00000427157 HOXC13P31276 330 aa3.24□□□□□ -1.89
LINC02541-201ENST00000427157 RPL24P83731 157 aaKnown RBP3.24□□□□□ -1.89
LINC02541-201ENST00000427157 NAE1Q13564 534 aa3.24□□□□□ -1.89
LINC02541-201ENST00000427157 TTI2Q6NXR4 508 aa3.24□□□□□ -1.89
LINC02541-201ENST00000427157 BRAT1Q6PJG6 821 aa3.24□□□□□ -1.89
LINC02541-201ENST00000427157 SLC22A25Q6T423 547 aa3.24□□□□□ -1.89
LINC02541-201ENST00000427157 BBS12Q6ZW61 710 aa3.24□□□□□ -1.89
LINC02541-201ENST00000427157 STPG4Q8N801 248 aa3.24□□□□□ -1.89
LINC02541-201ENST00000427157 ACVR1CQ8NER5 493 aa3.24□□□□□ -1.89
LINC02541-201ENST00000427157 TBC1D20Q96BZ9 403 aa3.24□□□□□ -1.89
LINC02541-201ENST00000427157 RHBDF1Q96CC6 855 aa3.24□□□□□ -1.89
LINC02541-201ENST00000427157 ORAI1Q96D31 301 aa3.24□□□□□ -1.89
LINC02541-201ENST00000427157 PABPC5Q96DU9 382 aaKnown RBP3.24□□□□□ -1.89
LINC02541-201ENST00000427157 LINGO1Q96FE5 620 aa3.24□□□□□ -1.89
LINC02541-201ENST00000427157 STAMBPL1Q96FJ0 436 aa3.24□□□□□ -1.89
LINC02541-201ENST00000427157 GRAMD2BQ96HH9 432 aa3.24□□□□□ -1.89
LINC02541-201ENST00000427157 SLC41A2Q96JW4 573 aa3.24□□□□□ -1.89
LINC02541-201ENST00000427157 LRR1Q96L50 414 aa3.24□□□□□ -1.89
LINC02541-201ENST00000427157 QRFPRQ96P65 431 aa3.24□□□□□ -1.89
LINC02541-201ENST00000427157 ASCL2Q99929 193 aa3.24□□□□□ -1.89
LINC02541-201ENST00000427157 FAM110AQ9BQ89 295 aa3.24□□□□□ -1.89
LINC02541-201ENST00000427157 NEURL2Q9BR09 285 aa3.24□□□□□ -1.89
LINC02541-201ENST00000427157 GLIS2Q9BZE0 524 aaPredicted RBP3.24□□□□□ -1.89
LINC02541-201ENST00000427157 INTS2Q9H0H0 1204 aaKnown RBP3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms