RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 NPIPB15A6NHN6 443 aaPredicted RBP7.42□□□□□ -1.22
LINC01049-201ENST00000426840 MEI4A8MW99 385 aa7.42□□□□□ -1.22
LINC01049-201ENST00000426840 NEMP1O14524 444 aa7.42□□□□□ -1.22
LINC01049-201ENST00000426840 RAD51BO15315 384 aa7.42□□□□□ -1.22
LINC01049-201ENST00000426840 SLC31A1O15431 190 aa7.42□□□□□ -1.22
LINC01049-201ENST00000426840 PSMD3O43242 534 aa7.42□□□□□ -1.22
LINC01049-201ENST00000426840 PHF2O75151 1096 aa7.42□□□□□ -1.22
LINC01049-201ENST00000426840 SASH3O75995 380 aa7.42□□□□□ -1.22
LINC01049-201ENST00000426840 TM7SF2O76062 418 aa7.42□□□□□ -1.22
LINC01049-201ENST00000426840 HEXIM1O94992 359 aaKnown RBP7.42□□□□□ -1.22
LINC01049-201ENST00000426840 IFNB1P01574 187 aa7.42□□□□□ -1.22
LINC01049-201ENST00000426840 TUBB4AP04350 444 aa7.42□□□□□ -1.22
LINC01049-201ENST00000426840 WNT1P04628 370 aa7.42□□□□□ -1.22
LINC01049-201ENST00000426840 CA4P22748 312 aa7.42□□□□□ -1.22
LINC01049-201ENST00000426840 LHCGRP22888 699 aa7.42□□□□□ -1.22
LINC01049-201ENST00000426840 VIPR1P32241 457 aa7.42□□□□□ -1.22
LINC01049-201ENST00000426840 NUDT1P36639 197 aa7.42□□□□□ -1.22
LINC01049-201ENST00000426840 ADH7P40394 386 aa7.42□□□□□ -1.22
LINC01049-201ENST00000426840 PAFAH1B1P43034 410 aa7.42□□□□□ -1.22
LINC01049-201ENST00000426840 GRIA4P48058 902 aa7.42□□□□□ -1.22
LINC01049-201ENST00000426840 LIG3P49916 1009 aa7.42□□□□□ -1.22
LINC01049-201ENST00000426840 EPHB1P54762 984 aa7.42□□□□□ -1.22
LINC01049-201ENST00000426840 CREB5Q02930 508 aa7.42□□□□□ -1.22
LINC01049-201ENST00000426840 OLIG2Q13516 323 aa7.42□□□□□ -1.22
LINC01049-201ENST00000426840 GALNT3Q14435 633 aa7.42□□□□□ -1.22
LINC01049-201ENST00000426840 SPARCL1Q14515 664 aa7.42□□□□□ -1.22
LINC01049-201ENST00000426840 PRPSAP1Q14558 356 aa7.42□□□□□ -1.22
LINC01049-201ENST00000426840 CNGA3Q16281 694 aa7.42□□□□□ -1.22
LINC01049-201ENST00000426840 PCSK7Q16549 785 aa7.42□□□□□ -1.22
LINC01049-201ENST00000426840 FAXCQ5TGI0 409 aa7.42□□□□□ -1.22
LINC01049-201ENST00000426840 KIAA1161Q6NSJ0 714 aa7.42□□□□□ -1.22
LINC01049-201ENST00000426840 CCDC137Q6PK04 289 aaKnown RBP7.42□□□□□ -1.22
LINC01049-201ENST00000426840 ARHGEF18Q6ZSZ5 1173 aa7.42□□□□□ -1.22
LINC01049-201ENST00000426840 TECPR1Q7Z6L1 1165 aa7.42□□□□□ -1.22
LINC01049-201ENST00000426840 TSPAN33Q86UF1 283 aa7.42□□□□□ -1.22
LINC01049-201ENST00000426840 ZSCAN30Q86W11 494 aa7.42□□□□□ -1.22
LINC01049-201ENST00000426840 NDUFAF2Q8N183 169 aa7.42□□□□□ -1.22
LINC01049-201ENST00000426840 TMEM151AQ8N4L1 468 aa7.42□□□□□ -1.22
LINC01049-201ENST00000426840 TAB3Q8N5C8 712 aaPredicted RBP7.42□□□□□ -1.22
LINC01049-201ENST00000426840 PAF1Q8N7H5 531 aa7.42□□□□□ -1.22
LINC01049-201ENST00000426840 IPMKQ8NFU5 416 aa7.42□□□□□ -1.22
LINC01049-201ENST00000426840 CXorf40AQ8TE69 158 aa7.42□□□□□ -1.22
LINC01049-201ENST00000426840 CENPTQ96BT3 561 aa7.42□□□□□ -1.22
LINC01049-201ENST00000426840 EID2BQ96D98 161 aa7.42□□□□□ -1.22
LINC01049-201ENST00000426840 RMDN1Q96DB5 314 aa7.42□□□□□ -1.22
LINC01049-201ENST00000426840 BMFQ96LC9 184 aa7.42□□□□□ -1.22
LINC01049-201ENST00000426840 COQ10AQ96MF6 247 aa7.42□□□□□ -1.22
LINC01049-201ENST00000426840 LENG8Q96PV6 779 aaPredicted RBP7.42□□□□□ -1.22
LINC01049-201ENST00000426840 WRAP53Q9BUR4 548 aaKnown RBP7.42□□□□□ -1.22
LINC01049-201ENST00000426840 ADGRE3Q9BY15 652 aa7.42□□□□□ -1.22
LINC01049-201ENST00000426840 MIR1-1HGQ9H1L0 117 aa7.42□□□□□ -1.22
LINC01049-201ENST00000426840 ARNT2Q9HBZ2 717 aa7.42□□□□□ -1.22
LINC01049-201ENST00000426840 MAGEE1Q9HCI5 957 aa7.42□□□□□ -1.22
LINC01049-201ENST00000426840 TM9SF3Q9HD45 589 aa7.42□□□□□ -1.22
LINC01049-201ENST00000426840 PARD6AQ9NPB6 346 aa7.42□□□□□ -1.22
LINC01049-201ENST00000426840 MKL2Q9ULH7 1088 aa7.42□□□□□ -1.22
LINC01049-201ENST00000426840 DMTF1Q9Y222 760 aa7.42□□□□□ -1.22
LINC01049-201ENST00000426840 COQ6Q9Y2Z9 468 aa7.42□□□□□ -1.22
LINC01049-201ENST00000426840 HS3ST3A1Q9Y663 406 aa7.42□□□□□ -1.22
LINC01049-201ENST00000426840 WDFY4Q6ZS81 3184 aa7.41□□□□□ -1.22
LINC01049-201ENST00000426840 A0A1B0GTW7 788 aa7.41□□□□□ -1.22
LINC01049-201ENST00000426840 CAPN8A6NHC0 703 aa7.41□□□□□ -1.22
LINC01049-201ENST00000426840 PATE3B3GLJ2 98 aa7.41□□□□□ -1.22
LINC01049-201ENST00000426840 PRAMEF26H0Y7S4 382 aa7.41□□□□□ -1.22
LINC01049-201ENST00000426840 PSMD11O00231 422 aa7.41□□□□□ -1.22
LINC01049-201ENST00000426840 BCAT2O15382 392 aaPredicted RBP7.41□□□□□ -1.22
LINC01049-201ENST00000426840 RECQL5O94762 991 aaPredicted RBP7.41□□□□□ -1.22
LINC01049-201ENST00000426840 CLDN7O95471 211 aa7.41□□□□□ -1.22
LINC01049-201ENST00000426840 KRT14P02533 472 aa7.41□□□□□ -1.22
LINC01049-201ENST00000426840 ZNF806P0C7X5 589 aa7.41□□□□□ -1.22
LINC01049-201ENST00000426840 PIRTP0C851 137 aa7.41□□□□□ -1.22
LINC01049-201ENST00000426840 CYP2A6P11509 494 aaPredicted RBP7.41□□□□□ -1.22
LINC01049-201ENST00000426840 C6P13671 934 aa7.41□□□□□ -1.22
LINC01049-201ENST00000426840 HOXB4P17483 251 aaPredicted RBP7.41□□□□□ -1.22
LINC01049-201ENST00000426840 HNRNPA2B1P22626 353 aaKnown RBP7.41□□□□□ -1.22
LINC01049-201ENST00000426840 HOXD12P35452 270 aa7.41□□□□□ -1.22
LINC01049-201ENST00000426840 FDFT1P37268 417 aa7.41□□□□□ -1.22
LINC01049-201ENST00000426840 MPLP40238 635 aa7.41□□□□□ -1.22
LINC01049-201ENST00000426840 DPP6P42658 865 aa7.41□□□□□ -1.22
LINC01049-201ENST00000426840 FNTAP49354 379 aa7.41□□□□□ -1.22
LINC01049-201ENST00000426840 RACK1P63244 317 aaKnown RBP7.41□□□□□ -1.22
LINC01049-201ENST00000426840 IRX4P78413 519 aa7.41□□□□□ -1.22
LINC01049-201ENST00000426840 BNC1Q01954 994 aa7.41□□□□□ -1.22
LINC01049-201ENST00000426840 LMNB2Q03252 620 aa7.41□□□□□ -1.22
LINC01049-201ENST00000426840 SGCGQ13326 291 aa7.41□□□□□ -1.22
LINC01049-201ENST00000426840 SEMA5AQ13591 1074 aa7.41□□□□□ -1.22
LINC01049-201ENST00000426840 TRIP13Q15645 432 aaPredicted RBP7.41□□□□□ -1.22
LINC01049-201ENST00000426840 SLC1A5Q15758 541 aa7.41□□□□□ -1.22
LINC01049-201ENST00000426840 CCDC6Q16204 474 aa7.41□□□□□ -1.22
LINC01049-201ENST00000426840 DUOXA1Q1HG43 343 aa7.41□□□□□ -1.22
LINC01049-201ENST00000426840 WSCD2Q2TBF2 565 aa7.41□□□□□ -1.22
LINC01049-201ENST00000426840 SETMARQ53H47 684 aaPredicted RBP7.41□□□□□ -1.22
LINC01049-201ENST00000426840 SIRPB2Q5JXA9 342 aa7.41□□□□□ -1.22
LINC01049-201ENST00000426840 NAPEPLDQ6IQ20 393 aa7.41□□□□□ -1.22
LINC01049-201ENST00000426840 CCDC70Q6NSX1 233 aa7.41□□□□□ -1.22
LINC01049-201ENST00000426840 SLC23A3Q6PIS1 610 aa7.41□□□□□ -1.22
LINC01049-201ENST00000426840 C4orf22Q6V702 233 aa7.41□□□□□ -1.22
LINC01049-201ENST00000426840 RFLNAQ6ZTI6 216 aa7.41□□□□□ -1.22
LINC01049-201ENST00000426840 Q6ZVL8 140 aa7.41□□□□□ -1.22
LINC01049-201ENST00000426840 USP45Q70EL2 814 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms