RNA–Protein interactions for RNA: ENST00000420995.6

TRIM13-204, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-204ENST00000420995 RAB39AQ14964 217 aa15.85■□□□□ 0.13
TRIM13-204ENST00000420995 FGD3Q5JSP0 725 aa15.85■□□□□ 0.13
TRIM13-204ENST00000420995 ZNF549Q6P9A3 640 aa15.85■□□□□ 0.13
TRIM13-204ENST00000420995 ZNF467Q7Z7K2 595 aaPredicted RBP15.85■□□□□ 0.13
TRIM13-204ENST00000420995 ZNF554Q86TJ5 538 aa15.85■□□□□ 0.13
TRIM13-204ENST00000420995 ADAMTS16Q8TE57 1224 aa15.85■□□□□ 0.13
TRIM13-204ENST00000420995 SEPT8Q92599 483 aa15.85■□□□□ 0.13
TRIM13-204ENST00000420995 FEM1CQ96JP0 617 aa15.85■□□□□ 0.13
TRIM13-204ENST00000420995 POLR1BQ9H9Y6 1135 aa15.85■□□□□ 0.13
TRIM13-204ENST00000420995 FADS3Q9Y5Q0 445 aa15.85■□□□□ 0.13
TRIM13-204ENST00000420995 HS3ST4Q9Y661 456 aa15.85■□□□□ 0.13
TRIM13-204ENST00000420995 PLXNB2O15031 1838 aa15.85■□□□□ 0.13
TRIM13-204ENST00000420995 GJB3O75712 270 aa15.85■□□□□ 0.13
TRIM13-204ENST00000420995 RASAL1O95294 804 aa15.85■□□□□ 0.13
TRIM13-204ENST00000420995 THP07101 528 aa15.85■□□□□ 0.13
TRIM13-204ENST00000420995 FAM163BP0C2L3 166 aa15.85■□□□□ 0.13
TRIM13-204ENST00000420995 GFAPP14136 432 aa15.85■□□□□ 0.13
TRIM13-204ENST00000420995 PCSK1P29120 753 aa15.85■□□□□ 0.13
TRIM13-204ENST00000420995 SCNN1GP51170 649 aa15.85■□□□□ 0.13
TRIM13-204ENST00000420995 CRYBB1P53674 252 aaPredicted RBP15.85■□□□□ 0.13
TRIM13-204ENST00000420995 NFKB2Q00653 900 aa15.85■□□□□ 0.13
TRIM13-204ENST00000420995 BNIP2Q12982 314 aa15.85■□□□□ 0.13
TRIM13-204ENST00000420995 RPS6KA2Q15349 733 aa15.85■□□□□ 0.13
TRIM13-204ENST00000420995 FUT11Q495W5 492 aa15.85■□□□□ 0.13
TRIM13-204ENST00000420995 GPR142Q7Z601 462 aa15.85■□□□□ 0.13
TRIM13-204ENST00000420995 ANKRD23Q86SG2 305 aa15.85■□□□□ 0.13
TRIM13-204ENST00000420995 CROCCP3Q8IVE0 287 aa15.85■□□□□ 0.13
TRIM13-204ENST00000420995 RTL3Q8N8U3 475 aaKnown RBP15.85■□□□□ 0.13
TRIM13-204ENST00000420995 SMYD1Q8NB12 490 aa15.85■□□□□ 0.13
TRIM13-204ENST00000420995 IMP4Q96G21 291 aaKnown RBP15.85■□□□□ 0.13
TRIM13-204ENST00000420995 TEX37Q96LM6 180 aa15.85■□□□□ 0.13
TRIM13-204ENST00000420995 ARNT2Q9HBZ2 717 aa15.85■□□□□ 0.13
TRIM13-204ENST00000420995 ATP13A1Q9HD20 1204 aa15.85■□□□□ 0.13
TRIM13-204ENST00000420995 ZNHIT2Q9UHR6 403 aa15.85■□□□□ 0.13
TRIM13-204ENST00000420995 USP22Q9UPT9 525 aa15.85■□□□□ 0.13
TRIM13-204ENST00000420995 TRIP12Q14669 1992 aaPredicted RBP15.85■□□□□ 0.13
TRIM13-204ENST00000420995 TRIM64A6NGJ6 449 aa15.84■□□□□ 0.13
TRIM13-204ENST00000420995 IMPDH2P12268 514 aa15.84■□□□□ 0.13
TRIM13-204ENST00000420995 MTHFD2P13995 350 aa15.84■□□□□ 0.13
TRIM13-204ENST00000420995 MAPK10P53779 464 aa15.84■□□□□ 0.13
TRIM13-204ENST00000420995 TNK2Q07912 1038 aa15.84■□□□□ 0.13
TRIM13-204ENST00000420995 PLCL1Q15111 1095 aa15.84■□□□□ 0.13
TRIM13-204ENST00000420995 C9orf131Q5VYM1 1079 aa15.84■□□□□ 0.13
TRIM13-204ENST00000420995 AFMIDQ63HM1 303 aa15.84■□□□□ 0.13
TRIM13-204ENST00000420995 PRMT9Q6P2P2 845 aa15.84■□□□□ 0.13
TRIM13-204ENST00000420995 PATL1Q86TB9 770 aaKnown RBP15.84■□□□□ 0.13
TRIM13-204ENST00000420995 LRRTM3Q86VH5 581 aa15.84■□□□□ 0.13
TRIM13-204ENST00000420995 MAGEE2Q8TD90 523 aaPredicted RBP15.84■□□□□ 0.13
TRIM13-204ENST00000420995 TBATAQ96M53 351 aa15.84■□□□□ 0.13
TRIM13-204ENST00000420995 PPP1R2P1Q96PQ5 205 aa15.84■□□□□ 0.13
TRIM13-204ENST00000420995 SDR39U1Q9NRG7 319 aaPredicted RBP15.84■□□□□ 0.13
TRIM13-204ENST00000420995 CLEC11AQ9Y240 323 aa15.84■□□□□ 0.13
TRIM13-204ENST00000420995 PCDHA9Q9Y5H5 950 aa15.84■□□□□ 0.13
TRIM13-204ENST00000420995 PDHXO00330 501 aa15.84■□□□□ 0.13
TRIM13-204ENST00000420995 BAIAP3O94812 1187 aa15.84■□□□□ 0.13
TRIM13-204ENST00000420995 MMP2P08253 660 aa15.84■□□□□ 0.13
TRIM13-204ENST00000420995 HAPLN1P10915 354 aaPredicted RBP15.84■□□□□ 0.13
TRIM13-204ENST00000420995 GSK3BP49841 420 aa15.84■□□□□ 0.13
TRIM13-204ENST00000420995 TIAL1Q01085 375 aaKnown RBP eCLIP15.84■□□□□ 0.13
TRIM13-204ENST00000420995 NEDD8Q15843 81 aa15.84■□□□□ 0.13
TRIM13-204ENST00000420995 PYCR3Q53H96 274 aa15.84■□□□□ 0.13
TRIM13-204ENST00000420995 CYBRD1Q53TN4 286 aa15.84■□□□□ 0.13
TRIM13-204ENST00000420995 AARS2Q5JTZ9 985 aaKnown RBP15.84■□□□□ 0.13
TRIM13-204ENST00000420995 BRMS1LQ5PSV4 323 aa15.84■□□□□ 0.13
TRIM13-204ENST00000420995 KANK2Q63ZY3 851 aa15.84■□□□□ 0.13
TRIM13-204ENST00000420995 IQSEC1Q6DN90 963 aa15.84■□□□□ 0.13
TRIM13-204ENST00000420995 XKR5Q6UX68 686 aa15.84■□□□□ 0.13
TRIM13-204ENST00000420995 Q6ZNX1 250 aa15.84■□□□□ 0.13
TRIM13-204ENST00000420995 SPRED1Q7Z699 444 aa15.84■□□□□ 0.13
TRIM13-204ENST00000420995 TRPV3Q8NET8 790 aa15.84■□□□□ 0.13
TRIM13-204ENST00000420995 NPLOC4Q8TAT6 608 aa15.84■□□□□ 0.13
TRIM13-204ENST00000420995 THAP11Q96EK4 314 aa15.84■□□□□ 0.13
TRIM13-204ENST00000420995 MFSD1Q9H3U5 465 aa15.84■□□□□ 0.13
TRIM13-204ENST00000420995 ALG2Q9H553 416 aa15.84■□□□□ 0.13
TRIM13-204ENST00000420995 PIF1Q9H611 641 aa15.84■□□□□ 0.13
TRIM13-204ENST00000420995 SLC38A7Q9NVC3 462 aa15.84■□□□□ 0.13
TRIM13-204ENST00000420995 SLAMF8Q9P0V8 285 aa15.84■□□□□ 0.13
TRIM13-204ENST00000420995 BOLA2-SMG1P6H3BVE0 249 aa15.83■□□□□ 0.13
TRIM13-204ENST00000420995 ZNF701M0R085 212 aaPredicted RBP15.83■□□□□ 0.13
TRIM13-204ENST00000420995 SLC7A4O43246 635 aa15.83■□□□□ 0.13
TRIM13-204ENST00000420995 SNAP29O95721 258 aa15.83■□□□□ 0.13
TRIM13-204ENST00000420995 CASP2P42575 452 aa15.83■□□□□ 0.13
TRIM13-204ENST00000420995 BRCC3P46736 316 aa15.83■□□□□ 0.13
TRIM13-204ENST00000420995 NAA20P61599 178 aa15.83■□□□□ 0.13
TRIM13-204ENST00000420995 SIRPB2Q5JXA9 342 aa15.83■□□□□ 0.13
TRIM13-204ENST00000420995 TMTC4Q5T4D3 741 aa15.83■□□□□ 0.13
TRIM13-204ENST00000420995 ACBD5Q5T8D3 534 aaPredicted RBP15.83■□□□□ 0.13
TRIM13-204ENST00000420995 ABRAXAS1Q6UWZ7 409 aa15.83■□□□□ 0.13
TRIM13-204ENST00000420995 KCTD8Q6ZWB6 473 aa15.83■□□□□ 0.13
TRIM13-204ENST00000420995 GIPC3Q8TF64 312 aa15.83■□□□□ 0.13
TRIM13-204ENST00000420995 TMEM125Q96AQ2 219 aa15.83■□□□□ 0.13
TRIM13-204ENST00000420995 HMCESQ96FZ2 354 aa15.83■□□□□ 0.13
TRIM13-204ENST00000420995 TMEM74Q96NL1 305 aa15.83■□□□□ 0.13
TRIM13-204ENST00000420995 SLC52A3Q9NQ40 469 aa15.83■□□□□ 0.13
TRIM13-204ENST00000420995 FAIMQ9NVQ4 179 aa15.83■□□□□ 0.13
TRIM13-204ENST00000420995 GID8Q9NWU2 228 aa15.83■□□□□ 0.13
TRIM13-204ENST00000420995 CDH7Q9ULB5 785 aa15.83■□□□□ 0.13
TRIM13-204ENST00000420995 TIMM22Q9Y584 194 aa15.83■□□□□ 0.13
TRIM13-204ENST00000420995 ASPDHA6ND91 283 aa15.83■□□□□ 0.12
TRIM13-204ENST00000420995 MROH6A6NGR9 719 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms