RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 LYSMD3Q7Z3D4 306 aa10.14□□□□□ -0.79
NCKIPSD-202ENST00000413374 KIAA1328Q86T90 577 aa10.14□□□□□ -0.79
NCKIPSD-202ENST00000413374 VSIG1Q86XK7 387 aa10.14□□□□□ -0.79
NCKIPSD-202ENST00000413374 NRROSQ86YC3 692 aa10.14□□□□□ -0.79
NCKIPSD-202ENST00000413374 SDR16C5Q8N3Y7 309 aa10.14□□□□□ -0.79
NCKIPSD-202ENST00000413374 CCHCR1Q8TD31 782 aa10.14□□□□□ -0.79
NCKIPSD-202ENST00000413374 CCDC74AQ96AQ1 378 aa10.14□□□□□ -0.79
NCKIPSD-202ENST00000413374 NXPE2Q96DL1 559 aa10.14□□□□□ -0.79
NCKIPSD-202ENST00000413374 IMP4Q96G21 291 aaKnown RBP10.14□□□□□ -0.79
NCKIPSD-202ENST00000413374 NAF1Q96HR8 494 aaKnown RBP10.14□□□□□ -0.79
NCKIPSD-202ENST00000413374 DEPDC7Q96QD5 511 aa10.14□□□□□ -0.79
NCKIPSD-202ENST00000413374 WDR24Q96S15 920 aa10.14□□□□□ -0.79
NCKIPSD-202ENST00000413374 HERPUD2Q9BSE4 406 aa10.14□□□□□ -0.79
NCKIPSD-202ENST00000413374 DESI2Q9BSY9 194 aa10.14□□□□□ -0.79
NCKIPSD-202ENST00000413374 ADGRE3Q9BY15 652 aa10.14□□□□□ -0.79
NCKIPSD-202ENST00000413374 FRMD8Q9BZ67 464 aaPredicted RBP10.14□□□□□ -0.79
NCKIPSD-202ENST00000413374 SLC25A51Q9H1U9 297 aa10.14□□□□□ -0.79
NCKIPSD-202ENST00000413374 ARFGAP3Q9NP61 516 aa10.14□□□□□ -0.79
NCKIPSD-202ENST00000413374 KCTD5Q9NXV2 234 aa10.14□□□□□ -0.79
NCKIPSD-202ENST00000413374 NCKIPSDQ9NZQ3 722 aa10.14□□□□□ -0.79
NCKIPSD-202ENST00000413374 KLHL8Q9P2G9 620 aaPredicted RBP10.14□□□□□ -0.79
NCKIPSD-202ENST00000413374 TRIM10Q9UDY6 481 aa10.14□□□□□ -0.79
NCKIPSD-202ENST00000413374 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.14□□□□□ -0.79
NCKIPSD-202ENST00000413374 MACROD2A1Z1Q3 448 aa10.13□□□□□ -0.79
NCKIPSD-202ENST00000413374 H7C0C1 242 aa10.13□□□□□ -0.79
NCKIPSD-202ENST00000413374 TLX3O43711 291 aaPredicted RBP10.13□□□□□ -0.79
NCKIPSD-202ENST00000413374 BRINP1O60477 761 aa10.13□□□□□ -0.79
NCKIPSD-202ENST00000413374 ATP1A1P05023 1023 aaKnown RBP10.13□□□□□ -0.79
NCKIPSD-202ENST00000413374 FGF1P05230 155 aa10.13□□□□□ -0.79
NCKIPSD-202ENST00000413374 ZNF30P17039 623 aa10.13□□□□□ -0.79
NCKIPSD-202ENST00000413374 NFKB1P19838 968 aa10.13□□□□□ -0.79
NCKIPSD-202ENST00000413374 FECHP22830 423 aa10.13□□□□□ -0.79
NCKIPSD-202ENST00000413374 CD68P34810 354 aaPredicted RBP10.13□□□□□ -0.79
NCKIPSD-202ENST00000413374 ATP5OP48047 213 aa10.13□□□□□ -0.79
NCKIPSD-202ENST00000413374 SPINT3P49223 89 aa10.13□□□□□ -0.79
NCKIPSD-202ENST00000413374 MAZP56270 477 aaKnown RBP10.13□□□□□ -0.79
NCKIPSD-202ENST00000413374 RPL26P61254 145 aaKnown RBP10.13□□□□□ -0.79
NCKIPSD-202ENST00000413374 CTBSQ01459 385 aa10.13□□□□□ -0.79
NCKIPSD-202ENST00000413374 CDK18Q07002 472 aa10.13□□□□□ -0.79
NCKIPSD-202ENST00000413374 DPTQ07507 201 aa10.13□□□□□ -0.79
NCKIPSD-202ENST00000413374 WASHC5Q12768 1159 aa10.13□□□□□ -0.79
NCKIPSD-202ENST00000413374 PRKD1Q15139 912 aaPredicted RBP10.13□□□□□ -0.79
NCKIPSD-202ENST00000413374 NOMO1Q15155 1222 aa10.13□□□□□ -0.79
NCKIPSD-202ENST00000413374 ISXQ2M1V0 245 aa10.13□□□□□ -0.79
NCKIPSD-202ENST00000413374 ZNF648Q5T619 568 aaPredicted RBP10.13□□□□□ -0.79
NCKIPSD-202ENST00000413374 C11orf63Q6NUN7 778 aa10.13□□□□□ -0.79
NCKIPSD-202ENST00000413374 ADAMTSL4Q6UY14 1074 aa10.13□□□□□ -0.79
NCKIPSD-202ENST00000413374 NRSN1Q8IZ57 195 aa10.13□□□□□ -0.79
NCKIPSD-202ENST00000413374 SLC25A41Q8N5S1 370 aa10.13□□□□□ -0.79
NCKIPSD-202ENST00000413374 EXD1Q8NHP7 514 aa10.13□□□□□ -0.79
NCKIPSD-202ENST00000413374 KIAA1524Q8TCG1 905 aa10.13□□□□□ -0.79
NCKIPSD-202ENST00000413374 EID2BQ96D98 161 aa10.13□□□□□ -0.79
NCKIPSD-202ENST00000413374 ATXN7L3BQ96GX2 97 aa10.13□□□□□ -0.79
NCKIPSD-202ENST00000413374 RBM41Q96IZ5 413 aaKnown RBP10.13□□□□□ -0.79
NCKIPSD-202ENST00000413374 HIC2Q96JB3 615 aa10.13□□□□□ -0.79
NCKIPSD-202ENST00000413374 TEKT5Q96M29 485 aa10.13□□□□□ -0.79
NCKIPSD-202ENST00000413374 TRIB3Q96RU7 358 aa10.13□□□□□ -0.79
NCKIPSD-202ENST00000413374 NRSN2Q9GZP1 204 aa10.13□□□□□ -0.79
NCKIPSD-202ENST00000413374 FAM83DQ9H4H8 585 aa10.13□□□□□ -0.79
NCKIPSD-202ENST00000413374 BPIFA1Q9NP55 256 aa10.13□□□□□ -0.79
NCKIPSD-202ENST00000413374 PKD2L2Q9NZM6 624 aa10.13□□□□□ -0.79
NCKIPSD-202ENST00000413374 LRIT1Q9P2V4 623 aa10.13□□□□□ -0.79
NCKIPSD-202ENST00000413374 ZNHIT2Q9UHR6 403 aa10.13□□□□□ -0.79
NCKIPSD-202ENST00000413374 ATXN7L1Q9ULK2 861 aaPredicted RBP10.13□□□□□ -0.79
NCKIPSD-202ENST00000413374 PACSIN2Q9UNF0 486 aaPredicted RBP10.13□□□□□ -0.79
NCKIPSD-202ENST00000413374 RPL26L1Q9UNX3 145 aaKnown RBP10.13□□□□□ -0.79
NCKIPSD-202ENST00000413374 PCDHA3Q9Y5H8 950 aa10.13□□□□□ -0.79
NCKIPSD-202ENST00000413374 ST14Q9Y5Y6 855 aa10.13□□□□□ -0.79
NCKIPSD-202ENST00000413374 OAS3Q9Y6K5 1087 aaKnown RBP10.13□□□□□ -0.79
NCKIPSD-202ENST00000413374 RNF215Q9Y6U7 377 aa10.13□□□□□ -0.79
NCKIPSD-202ENST00000413374 ZFHX4Q86UP3 3567 aa10.13□□□□□ -0.79
NCKIPSD-202ENST00000413374 WDFY3Q8IZQ1 3526 aa10.12□□□□□ -0.79
NCKIPSD-202ENST00000413374 AKAP13Q12802 2813 aa10.12□□□□□ -0.79
NCKIPSD-202ENST00000413374 CHD8Q9HCK8 2581 aa10.12□□□□□ -0.79
NCKIPSD-202ENST00000413374 PLXNB3Q9ULL4 1909 aa10.12□□□□□ -0.79
NCKIPSD-202ENST00000413374 PMS2P1A4D2B8 440 aa10.12□□□□□ -0.79
NCKIPSD-202ENST00000413374 GRID2IPA4D2P6 1211 aa10.12□□□□□ -0.79
NCKIPSD-202ENST00000413374 FADS2P1A8MWK0 482 aa10.12□□□□□ -0.79
NCKIPSD-202ENST00000413374 AURKAO14965 403 aa10.12□□□□□ -0.79
NCKIPSD-202ENST00000413374 NOBOXO60393 691 aa10.12□□□□□ -0.79
NCKIPSD-202ENST00000413374 ECEL1O95672 775 aa10.12□□□□□ -0.79
NCKIPSD-202ENST00000413374 RPLP0P05388 317 aaKnown RBP10.12□□□□□ -0.79
NCKIPSD-202ENST00000413374 PYGMP11217 842 aa10.12□□□□□ -0.79
NCKIPSD-202ENST00000413374 ITPKBP27987 946 aa10.12□□□□□ -0.79
NCKIPSD-202ENST00000413374 RBL1P28749 1068 aa10.12□□□□□ -0.79
NCKIPSD-202ENST00000413374 CTNNA1P35221 906 aaKnown RBP10.12□□□□□ -0.79
NCKIPSD-202ENST00000413374 ADCY8P40145 1251 aa10.12□□□□□ -0.79
NCKIPSD-202ENST00000413374 EIF2S3P41091 472 aaKnown RBP10.12□□□□□ -0.79
NCKIPSD-202ENST00000413374 CHRNA4P43681 627 aa10.12□□□□□ -0.79
NCKIPSD-202ENST00000413374 VAV2P52735 878 aa10.12□□□□□ -0.79
NCKIPSD-202ENST00000413374 GABREP78334 506 aa10.12□□□□□ -0.79
NCKIPSD-202ENST00000413374 ILF3Q12906 894 aaKnown RBP eCLIP10.12□□□□□ -0.791e-6■■■■□ 22.8
NCKIPSD-202ENST00000413374 SPIDRQ14159 915 aa10.12□□□□□ -0.79
NCKIPSD-202ENST00000413374 RTP5Q14D33 572 aa10.12□□□□□ -0.79
NCKIPSD-202ENST00000413374 COL28A1Q2UY09 1125 aa10.12□□□□□ -0.79
NCKIPSD-202ENST00000413374 C3orf38Q5JPI3 329 aa10.12□□□□□ -0.79
NCKIPSD-202ENST00000413374 CCDC70Q6NSX1 233 aa10.12□□□□□ -0.79
NCKIPSD-202ENST00000413374 OGFOD3Q6PK18 319 aa10.12□□□□□ -0.79
NCKIPSD-202ENST00000413374 RBM44Q6ZP01 1051 aaKnown RBP10.12□□□□□ -0.79
NCKIPSD-202ENST00000413374 TMEM139Q8IV31 216 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms