RNA–Protein interactions for RNA: ENST00000410466.1

RNU6-554P-201, Transcript of RNA, U6 small nuclear 554, pseudogene, humanhuman

BASIC

Gene RNU6-554P, Length 106 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-554P-201ENST00000410466 LRP11Q86VZ4 500 aa0.34□□□□□ -2.36
RNU6-554P-201ENST00000410466 FOXRED2Q8IWF2 684 aa0.34□□□□□ -2.36
RNU6-554P-201ENST00000410466 SCN4BQ8IWT1 228 aa0.34□□□□□ -2.36
RNU6-554P-201ENST00000410466 RAB42Q8N4Z0 105 aa0.34□□□□□ -2.36
RNU6-554P-201ENST00000410466 Q8NBF4 154 aa0.34□□□□□ -2.36
RNU6-554P-201ENST00000410466 RHOXF1Q8NHV9 184 aa0.34□□□□□ -2.36
RNU6-554P-201ENST00000410466 NEUROD6Q96NK8 337 aa0.34□□□□□ -2.36
RNU6-554P-201ENST00000410466 USP28Q96RU2 1077 aa0.34□□□□□ -2.36
RNU6-554P-201ENST00000410466 MTERF1Q99551 399 aaKnown RBP0.34□□□□□ -2.36
RNU6-554P-201ENST00000410466 NPAS1Q99742 590 aa0.34□□□□□ -2.36
RNU6-554P-201ENST00000410466 CLSTN3Q9BQT9 956 aa0.34□□□□□ -2.36
RNU6-554P-201ENST00000410466 HAUS8Q9BT25 410 aa0.34□□□□□ -2.36
RNU6-554P-201ENST00000410466 ACAD9Q9H845 621 aa0.34□□□□□ -2.36
RNU6-554P-201ENST00000410466 PDE11AQ9HCR9 933 aa0.34□□□□□ -2.36
RNU6-554P-201ENST00000410466 CYTL1Q9NRR1 136 aa0.34□□□□□ -2.36
RNU6-554P-201ENST00000410466 BABAM1Q9NWV8 329 aa0.34□□□□□ -2.36
RNU6-554P-201ENST00000410466 ERAP1Q9NZ08 941 aa0.34□□□□□ -2.36
RNU6-554P-201ENST00000410466 ADAM22Q9P0K1 906 aa0.34□□□□□ -2.36
RNU6-554P-201ENST00000410466 NDRG3Q9UGV2 375 aa0.34□□□□□ -2.36
RNU6-554P-201ENST00000410466 ZNF175Q9Y473 711 aa0.34□□□□□ -2.36
RNU6-554P-201ENST00000410466 ZNFX1Q9P2E3 1918 aaKnown RBP0.33□□□□□ -2.36
RNU6-554P-201ENST00000410466 WI2-2373I1.2A0A1W2PRP0 233 aa0.33□□□□□ -2.36
RNU6-554P-201ENST00000410466 OR6C68A6NDL8 312 aa0.33□□□□□ -2.36
RNU6-554P-201ENST00000410466 AGAP5A6NIR3 686 aa0.33□□□□□ -2.36
RNU6-554P-201ENST00000410466 NPIPB13A6NJU9 1138 aa0.33□□□□□ -2.36
RNU6-554P-201ENST00000410466 AREL1O15033 823 aa0.33□□□□□ -2.36
RNU6-554P-201ENST00000410466 RPP40O75818 363 aaKnown RBP0.33□□□□□ -2.36
RNU6-554P-201ENST00000410466 PDE9AO76083 593 aa0.33□□□□□ -2.36
RNU6-554P-201ENST00000410466 MTA2O94776 668 aa0.33□□□□□ -2.36
RNU6-554P-201ENST00000410466 SLCO2B1O94956 709 aa0.33□□□□□ -2.36
RNU6-554P-201ENST00000410466 CLDN1O95832 211 aa0.33□□□□□ -2.36
RNU6-554P-201ENST00000410466 HOXD4P09016 255 aaPredicted RBP0.33□□□□□ -2.36
RNU6-554P-201ENST00000410466 ANXA7P20073 488 aaKnown RBP0.33□□□□□ -2.36
RNU6-554P-201ENST00000410466 TTKP33981 857 aa0.33□□□□□ -2.36
RNU6-554P-201ENST00000410466 HALP42357 657 aa0.33□□□□□ -2.36
RNU6-554P-201ENST00000410466 GSCP56915 257 aaPredicted RBP0.33□□□□□ -2.36
RNU6-554P-201ENST00000410466 POLD3Q15054 466 aaPredicted RBP0.33□□□□□ -2.36
RNU6-554P-201ENST00000410466 TEAD2Q15562 447 aa0.33□□□□□ -2.36
RNU6-554P-201ENST00000410466 ME3Q16798 604 aa0.33□□□□□ -2.36
RNU6-554P-201ENST00000410466 WLSQ5T9L3 541 aa0.33□□□□□ -2.36
RNU6-554P-201ENST00000410466 MAP3K21Q5TCX8 1036 aa0.33□□□□□ -2.36
RNU6-554P-201ENST00000410466 CES5AQ6NT32 575 aa0.33□□□□□ -2.36
RNU6-554P-201ENST00000410466 KCTD18Q6PI47 426 aaPredicted RBP0.33□□□□□ -2.36
RNU6-554P-201ENST00000410466 ZNF704Q6ZNC4 412 aaPredicted RBP0.33□□□□□ -2.36
RNU6-554P-201ENST00000410466 OVCH2Q7RTZ1 564 aa0.33□□□□□ -2.36
RNU6-554P-201ENST00000410466 TSPAN33Q86UF1 283 aa0.33□□□□□ -2.36
RNU6-554P-201ENST00000410466 ADSSL1Q8N142 457 aa0.33□□□□□ -2.36
RNU6-554P-201ENST00000410466 OR2AK2Q8NG84 335 aa0.33□□□□□ -2.36
RNU6-554P-201ENST00000410466 OTUD7AQ8TE49 926 aaPredicted RBP0.33□□□□□ -2.36
RNU6-554P-201ENST00000410466 SREK1Q8WXA9 508 aaKnown RBP0.33□□□□□ -2.36
RNU6-554P-201ENST00000410466 BADQ92934 168 aa0.33□□□□□ -2.36
RNU6-554P-201ENST00000410466 C18orf8Q96DM3 657 aa0.33□□□□□ -2.36
RNU6-554P-201ENST00000410466 STRBPQ96SI9 672 aaKnown RBP0.33□□□□□ -2.36
RNU6-554P-201ENST00000410466 CMKLR1Q99788 373 aa0.33□□□□□ -2.36
RNU6-554P-201ENST00000410466 RTP3Q9BQQ7 232 aa0.33□□□□□ -2.36
RNU6-554P-201ENST00000410466 HELLSQ9NRZ9 838 aa0.33□□□□□ -2.36
RNU6-554P-201ENST00000410466 SLC22A11Q9NSA0 550 aa0.33□□□□□ -2.36
RNU6-554P-201ENST00000410466 CISD1Q9NZ45 108 aaKnown RBP0.33□□□□□ -2.36
RNU6-554P-201ENST00000410466 HDAC6Q9UBN7 1215 aa0.33□□□□□ -2.36
RNU6-554P-201ENST00000410466 MDN1Q9NU22 5596 aa0.32□□□□□ -2.36
RNU6-554P-201ENST00000410466 ZCWPW2A0A1B0GU75 182 aa0.32□□□□□ -2.36
RNU6-554P-201ENST00000410466 SH2D7A6NKC9 451 aaPredicted RBP0.32□□□□□ -2.36
RNU6-554P-201ENST00000410466 KIF28PB7ZC32 967 aa0.32□□□□□ -2.36
RNU6-554P-201ENST00000410466 MYBP10242 640 aa0.32□□□□□ -2.36
RNU6-554P-201ENST00000410466 CYP4B1P13584 511 aa0.32□□□□□ -2.36
RNU6-554P-201ENST00000410466 LIFP15018 202 aa0.32□□□□□ -2.36
RNU6-554P-201ENST00000410466 CDKN1CP49918 316 aaPredicted RBP0.32□□□□□ -2.36
RNU6-554P-201ENST00000410466 HNRNPH2P55795 449 aaKnown RBP0.32□□□□□ -2.36
RNU6-554P-201ENST00000410466 RIPK4P57078 832 aa0.32□□□□□ -2.36
RNU6-554P-201ENST00000410466 PLIN5Q00G26 463 aa0.32□□□□□ -2.36
RNU6-554P-201ENST00000410466 GRM4Q14833 912 aa0.32□□□□□ -2.36
RNU6-554P-201ENST00000410466 RRS1Q15050 365 aaKnown RBP0.32□□□□□ -2.36
RNU6-554P-201ENST00000410466 KRT24Q2M2I5 525 aa0.32□□□□□ -2.36
RNU6-554P-201ENST00000410466 HLA-BQ31612 363 aa0.32□□□□□ -2.36
RNU6-554P-201ENST00000410466 MMEL1Q495T6 779 aa0.32□□□□□ -2.36
RNU6-554P-201ENST00000410466 RAD9BQ6WBX8 426 aa0.32□□□□□ -2.36
RNU6-554P-201ENST00000410466 TAOK1Q7L7X3 1001 aa0.32□□□□□ -2.36
RNU6-554P-201ENST00000410466 ISCA2Q86U28 154 aa0.32□□□□□ -2.36
RNU6-554P-201ENST00000410466 BRSK2Q8IWQ3 736 aa0.32□□□□□ -2.36
RNU6-554P-201ENST00000410466 ZC3H3Q8IXZ2 948 aaKnown RBP0.32□□□□□ -2.36
RNU6-554P-201ENST00000410466 FAM186BQ8IYM0 893 aa0.32□□□□□ -2.36
RNU6-554P-201ENST00000410466 KIAA0319LQ8IZA0 1049 aa0.32□□□□□ -2.36
RNU6-554P-201ENST00000410466 LYPD1Q8N2G4 141 aa0.32□□□□□ -2.36
RNU6-554P-201ENST00000410466 PARP16Q8N5Y8 322 aa0.32□□□□□ -2.36
RNU6-554P-201ENST00000410466 POC5Q8NA72 575 aa0.32□□□□□ -2.36
RNU6-554P-201ENST00000410466 PHF10Q8WUB8 498 aaKnown RBP0.32□□□□□ -2.36
RNU6-554P-201ENST00000410466 WDR60Q8WVS4 1066 aa0.32□□□□□ -2.36
RNU6-554P-201ENST00000410466 ARSGQ96EG1 525 aa0.32□□□□□ -2.36
RNU6-554P-201ENST00000410466 PRICKLE1Q96MT3 831 aaPredicted RBP0.32□□□□□ -2.36
RNU6-554P-201ENST00000410466 TAAR9Q96RI9 348 aa0.32□□□□□ -2.36
RNU6-554P-201ENST00000410466 KRT12Q99456 494 aa0.32□□□□□ -2.36
RNU6-554P-201ENST00000410466 RHNO1Q9BSD3 238 aa0.32□□□□□ -2.36
RNU6-554P-201ENST00000410466 TMEM60Q9H2L4 133 aa0.32□□□□□ -2.36
RNU6-554P-201ENST00000410466 MARCH4Q9P2E8 410 aaPredicted RBP0.32□□□□□ -2.36
RNU6-554P-201ENST00000410466 CA14Q9ULX7 337 aa0.32□□□□□ -2.36
RNU6-554P-201ENST00000410466 PLCL2Q9UPR0 1127 aa0.32□□□□□ -2.36
RNU6-554P-201ENST00000410466 TNNQ9UQP3 1299 aa0.32□□□□□ -2.36
RNU6-554P-201ENST00000410466 ANKRD6Q9Y2G4 727 aa0.32□□□□□ -2.36
RNU6-554P-201ENST00000410466 ATP8A1Q9Y2Q0 1164 aa0.32□□□□□ -2.36
RNU6-554P-201ENST00000410466 FLT1P17948 1338 aa0.32□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms