RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 C9P02748 559 aa11.22□□□□□ -0.61
PRPF40A-202ENST00000410080 HOXC6P09630 235 aa11.22□□□□□ -0.61
PRPF40A-202ENST00000410080 ITPKAP23677 461 aa11.22□□□□□ -0.61
PRPF40A-202ENST00000410080 PSEN1P49768 467 aa11.22□□□□□ -0.61
PRPF40A-202ENST00000410080 BNIP1Q12981 228 aa11.22□□□□□ -0.61
PRPF40A-202ENST00000410080 TAPT1Q6NXT6 567 aa11.22□□□□□ -0.61
PRPF40A-202ENST00000410080 SV2AQ7L0J3 742 aa11.22□□□□□ -0.61
PRPF40A-202ENST00000410080 PSTKQ8IV42 348 aaKnown RBP11.22□□□□□ -0.61
PRPF40A-202ENST00000410080 BEND7Q8N7W2 519 aaPredicted RBP11.22□□□□□ -0.61
PRPF40A-202ENST00000410080 C12orf29Q8N999 325 aa11.22□□□□□ -0.61
PRPF40A-202ENST00000410080 GMPPBQ9Y5P6 360 aa11.22□□□□□ -0.61
PRPF40A-202ENST00000410080 CAPN6Q9Y6Q1 641 aa11.22□□□□□ -0.61
PRPF40A-202ENST00000410080 LRRC72A6NJI9 287 aa11.22□□□□□ -0.61
PRPF40A-202ENST00000410080 TEX46H3BTG2 121 aa11.22□□□□□ -0.61
PRPF40A-202ENST00000410080 MRASO14807 208 aa11.22□□□□□ -0.61
PRPF40A-202ENST00000410080 AKAP8O43823 692 aaKnown RBP11.22□□□□□ -0.61
PRPF40A-202ENST00000410080 TULP3O75386 442 aa11.22□□□□□ -0.61
PRPF40A-202ENST00000410080 RECQL5O94762 991 aaPredicted RBP11.22□□□□□ -0.61
PRPF40A-202ENST00000410080 ACADSP16219 412 aa11.22□□□□□ -0.61
PRPF40A-202ENST00000410080 CMPK1P30085 196 aa11.22□□□□□ -0.61
PRPF40A-202ENST00000410080 MIPP30301 263 aa11.22□□□□□ -0.61
PRPF40A-202ENST00000410080 CCKBRP32239 447 aa11.22□□□□□ -0.61
PRPF40A-202ENST00000410080 GRIA3P42263 894 aa11.22□□□□□ -0.61
PRPF40A-202ENST00000410080 CLCN7P51798 805 aa11.22□□□□□ -0.61
PRPF40A-202ENST00000410080 PPIGQ13427 754 aaKnown RBP eCLIP11.22□□□□□ -0.612e-7■□□□□ 11.2
PRPF40A-202ENST00000410080 ANKS1BQ7Z6G8 1248 aa11.22□□□□□ -0.61
PRPF40A-202ENST00000410080 TREML1Q86YW5 311 aa11.22□□□□□ -0.61
PRPF40A-202ENST00000410080 SLC22A15Q8IZD6 547 aa11.22□□□□□ -0.61
PRPF40A-202ENST00000410080 QKIQ96PU8 341 aaKnown RBP eCLIP11.22□□□□□ -0.617e-7■■■■■ 48
PRPF40A-202ENST00000410080 ASB2Q96Q27 587 aa11.22□□□□□ -0.61
PRPF40A-202ENST00000410080 GAL3ST1Q99999 423 aa11.22□□□□□ -0.61
PRPF40A-202ENST00000410080 AIF1LQ9BQI0 150 aa11.22□□□□□ -0.61
PRPF40A-202ENST00000410080 DEC1Q9P2X7 70 aa11.22□□□□□ -0.61
PRPF40A-202ENST00000410080 IFT52Q9Y366 437 aa11.22□□□□□ -0.61
PRPF40A-202ENST00000410080 B4DGG1 531 aa11.22□□□□□ -0.61
PRPF40A-202ENST00000410080 C9J4A7 227 aa11.22□□□□□ -0.61
PRPF40A-202ENST00000410080 NOL4O94818 638 aa11.22□□□□□ -0.61
PRPF40A-202ENST00000410080 SLITRK3O94933 977 aa11.22□□□□□ -0.61
PRPF40A-202ENST00000410080 PTPRAP18433 802 aa11.22□□□□□ -0.61
PRPF40A-202ENST00000410080 CDKL1Q00532 357 aa11.22□□□□□ -0.61
PRPF40A-202ENST00000410080 BEND5Q7L4P6 421 aa11.22□□□□□ -0.61
PRPF40A-202ENST00000410080 FAM83AQ86UY5 434 aa11.22□□□□□ -0.61
PRPF40A-202ENST00000410080 TMC8Q8IU68 726 aa11.22□□□□□ -0.61
PRPF40A-202ENST00000410080 ABRAQ8N0Z2 381 aa11.22□□□□□ -0.61
PRPF40A-202ENST00000410080 KIAA1683Q9H0B3 1180 aa11.22□□□□□ -0.61
PRPF40A-202ENST00000410080 PLGRKTQ9HBL7 147 aa11.22□□□□□ -0.61
PRPF40A-202ENST00000410080 AGO1Q9UL18 857 aaKnown RBP11.22□□□□□ -0.61
PRPF40A-202ENST00000410080 NRXN1Q9ULB1 1477 aa11.21□□□□□ -0.61
PRPF40A-202ENST00000410080 USP32Q8NFA0 1604 aa11.21□□□□□ -0.61
PRPF40A-202ENST00000410080 AQP1P29972 269 aa11.21□□□□□ -0.61
PRPF40A-202ENST00000410080 HSF2Q03933 536 aa11.21□□□□□ -0.61
PRPF40A-202ENST00000410080 HECTD2Q5U5R9 776 aa11.21□□□□□ -0.61
PRPF40A-202ENST00000410080 VITQ6UXI7 678 aa11.21□□□□□ -0.61
PRPF40A-202ENST00000410080 CDRT15Q96T59 188 aa11.21□□□□□ -0.61
PRPF40A-202ENST00000410080 NOD2Q9HC29 1040 aa11.21□□□□□ -0.61
PRPF40A-202ENST00000410080 PARPBPQ9NWS1 579 aa11.21□□□□□ -0.61
PRPF40A-202ENST00000410080 AK5Q9Y6K8 562 aa11.21□□□□□ -0.61
PRPF40A-202ENST00000410080 SYN1P17600 705 aa11.21□□□□□ -0.61
PRPF40A-202ENST00000410080 ITIH4Q14624 930 aa11.21□□□□□ -0.61
PRPF40A-202ENST00000410080 MCRS1Q96EZ8 462 aa11.21□□□□□ -0.61
PRPF40A-202ENST00000410080 COX4I2Q96KJ9 171 aa11.21□□□□□ -0.61
PRPF40A-202ENST00000410080 MARCH7Q9H992 704 aa11.21□□□□□ -0.61
PRPF40A-202ENST00000410080 XPR1Q9UBH6 696 aa11.21□□□□□ -0.61
PRPF40A-202ENST00000410080 SEC14L3Q9UDX4 400 aa11.21□□□□□ -0.61
PRPF40A-202ENST00000410080 MAP4K5Q9Y4K4 846 aa11.21□□□□□ -0.61
PRPF40A-202ENST00000410080 DEPDC5O75140 1603 aa11.21□□□□□ -0.61
PRPF40A-202ENST00000410080 KPNA4O00629 521 aaPredicted RBP11.21□□□□□ -0.61
PRPF40A-202ENST00000410080 CHN2P52757 468 aa11.21□□□□□ -0.61
PRPF40A-202ENST00000410080 PPP3R1P63098 170 aa11.21□□□□□ -0.61
PRPF40A-202ENST00000410080 C1QBPQ07021 282 aaKnown RBP11.21□□□□□ -0.61
PRPF40A-202ENST00000410080 SEMA5AQ13591 1074 aa11.21□□□□□ -0.61
PRPF40A-202ENST00000410080 C2orf27AQ580R0 203 aa11.21□□□□□ -0.61
PRPF40A-202ENST00000410080 CWF19L1Q69YN2 538 aaKnown RBP11.21□□□□□ -0.61
PRPF40A-202ENST00000410080 ZNF540Q8NDQ6 660 aa11.21□□□□□ -0.61
PRPF40A-202ENST00000410080 CLHC1Q8NHS4 586 aa11.21□□□□□ -0.61
PRPF40A-202ENST00000410080 PCDH9Q9HC56 1237 aa11.21□□□□□ -0.61
PRPF40A-202ENST00000410080 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.21□□□□□ -0.61
PRPF40A-202ENST00000410080 NR2E1Q9Y466 385 aa11.21□□□□□ -0.61
PRPF40A-202ENST00000410080 PXDNQ92626 1479 aa11.21□□□□□ -0.62
PRPF40A-202ENST00000410080 TCRBV5S4A2TA0A5A2 114 aa11.21□□□□□ -0.62
PRPF40A-202ENST00000410080 ANKRD63C9JTQ0 380 aa11.21□□□□□ -0.62
PRPF40A-202ENST00000410080 CST1P01037 141 aa11.21□□□□□ -0.62
PRPF40A-202ENST00000410080 SMIM11AP58511 58 aa11.21□□□□□ -0.62
PRPF40A-202ENST00000410080 USP4Q13107 963 aa11.21□□□□□ -0.62
PRPF40A-202ENST00000410080 SULT1C3Q6IMI6 304 aa11.21□□□□□ -0.62
PRPF40A-202ENST00000410080 SMARCD3Q6STE5 483 aa11.21□□□□□ -0.62
PRPF40A-202ENST00000410080 C8orf59Q8N0T1 100 aaPredicted RBP11.21□□□□□ -0.62
PRPF40A-202ENST00000410080 TTPALQ9BTX7 342 aa11.21□□□□□ -0.62
PRPF40A-202ENST00000410080 BRF2Q9HAW0 419 aa11.21□□□□□ -0.62
PRPF40A-202ENST00000410080 OAS3Q9Y6K5 1087 aaKnown RBP11.21□□□□□ -0.62
PRPF40A-202ENST00000410080 KIDINS220Q9ULH0 1771 aa11.21□□□□□ -0.62
PRPF40A-202ENST00000410080 A8MUA0 341 aa11.21□□□□□ -0.62
PRPF40A-202ENST00000410080 GNB5O14775 395 aa11.21□□□□□ -0.62
PRPF40A-202ENST00000410080 ULK1O75385 1050 aa11.21□□□□□ -0.62
PRPF40A-202ENST00000410080 CORO1AP31146 461 aaKnown RBP11.21□□□□□ -0.62
PRPF40A-202ENST00000410080 RPL22P35268 128 aaKnown RBP11.21□□□□□ -0.62
PRPF40A-202ENST00000410080 ITGA7Q13683 1181 aa11.21□□□□□ -0.62
PRPF40A-202ENST00000410080 RGMBQ6NW40 437 aa11.21□□□□□ -0.62
PRPF40A-202ENST00000410080 OTOP1Q7RTM1 612 aa11.21□□□□□ -0.62
PRPF40A-202ENST00000410080 NUP54Q7Z3B4 507 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms