RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 FAM117AQ9C073 453 aa12.78□□□□□ -0.36
CHRNA1-205ENST00000409542 CEP44Q9C0F1 390 aa12.78□□□□□ -0.36
CHRNA1-205ENST00000409542 CENPHQ9H3R5 247 aa12.78□□□□□ -0.36
CHRNA1-205ENST00000409542 ATP13A1Q9HD20 1204 aa12.78□□□□□ -0.36
CHRNA1-205ENST00000409542 STARD5Q9NSY2 213 aa12.78□□□□□ -0.36
CHRNA1-205ENST00000409542 NDFIP2Q9NV92 336 aa12.78□□□□□ -0.36
CHRNA1-205ENST00000409542 GULP1Q9UBP9 304 aa12.78□□□□□ -0.36
CHRNA1-205ENST00000409542 IP6K2Q9UHH9 426 aa12.78□□□□□ -0.36
CHRNA1-205ENST00000409542 SCN8AQ9UQD0 1980 aa12.78□□□□□ -0.36
CHRNA1-205ENST00000409542 AHCTF1Q8WYP5 2266 aa12.78□□□□□ -0.36
CHRNA1-205ENST00000409542 TCRBV5S1A1TA0A578 114 aa12.78□□□□□ -0.36
CHRNA1-205ENST00000409542 ILVBLA1L0T0 632 aa12.78□□□□□ -0.36
CHRNA1-205ENST00000409542 MYO1CO00159 1063 aa12.78□□□□□ -0.36
CHRNA1-205ENST00000409542 NDUFAB1O14561 156 aa12.78□□□□□ -0.36
CHRNA1-205ENST00000409542 PLD2O14939 933 aa12.78□□□□□ -0.36
CHRNA1-205ENST00000409542 GAS8O95995 478 aa12.78□□□□□ -0.36
CHRNA1-205ENST00000409542 FAM87AP0C7U9 286 aa12.78□□□□□ -0.36
CHRNA1-205ENST00000409542 HPDP32754 393 aaPredicted RBP12.78□□□□□ -0.36
CHRNA1-205ENST00000409542 DEUP1Q05D60 604 aa12.78□□□□□ -0.36
CHRNA1-205ENST00000409542 ADCY2Q08462 1091 aa12.78□□□□□ -0.36
CHRNA1-205ENST00000409542 MTA1Q13330 715 aa12.78□□□□□ -0.36
CHRNA1-205ENST00000409542 RAB6CQ53S08 254 aa12.78□□□□□ -0.36
CHRNA1-205ENST00000409542 FAXCQ5TGI0 409 aa12.78□□□□□ -0.36
CHRNA1-205ENST00000409542 LRRC38Q5VT99 294 aa12.78□□□□□ -0.36
CHRNA1-205ENST00000409542 TTC19Q6DKK2 380 aaPredicted RBP12.78□□□□□ -0.36
CHRNA1-205ENST00000409542 RETSATQ6NUM9 610 aa12.78□□□□□ -0.36
CHRNA1-205ENST00000409542 B4GALNT4Q76KP1 1039 aa12.78□□□□□ -0.36
CHRNA1-205ENST00000409542 KYQ8NBH2 561 aa12.78□□□□□ -0.36
CHRNA1-205ENST00000409542 TMEM35BQ8NCS4 154 aa12.78□□□□□ -0.36
CHRNA1-205ENST00000409542 ATL2Q8NHH9 583 aa12.78□□□□□ -0.36
CHRNA1-205ENST00000409542 ASB12Q8WXK4 309 aa12.78□□□□□ -0.36
CHRNA1-205ENST00000409542 CCDC74AQ96AQ1 378 aa12.78□□□□□ -0.36
CHRNA1-205ENST00000409542 PGAP3Q96FM1 320 aaPredicted RBP12.78□□□□□ -0.36
CHRNA1-205ENST00000409542 SNF8Q96H20 258 aa12.78□□□□□ -0.36
CHRNA1-205ENST00000409542 C1orf74Q96LT6 269 aa12.78□□□□□ -0.36
CHRNA1-205ENST00000409542 MAGEB5Q9BZ81 275 aa12.78□□□□□ -0.36
CHRNA1-205ENST00000409542 RAB6CQ9H0N0 254 aa12.78□□□□□ -0.36
CHRNA1-205ENST00000409542 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.78□□□□□ -0.36
CHRNA1-205ENST00000409542 SIRPGQ9P1W8 387 aa12.78□□□□□ -0.36
CHRNA1-205ENST00000409542 NOVA2Q9UNW9 492 aaKnown RBP12.78□□□□□ -0.36
CHRNA1-205ENST00000409542 HEMK1Q9Y5R4 338 aaPredicted RBP12.78□□□□□ -0.36
CHRNA1-205ENST00000409542 TMEM191CA6NGB0 347 aa12.77□□□□□ -0.37
CHRNA1-205ENST00000409542 TSPAN6O43657 245 aa12.77□□□□□ -0.37
CHRNA1-205ENST00000409542 MMP20O60882 483 aa12.77□□□□□ -0.37
CHRNA1-205ENST00000409542 PTPN7P35236 360 aa12.77□□□□□ -0.37
CHRNA1-205ENST00000409542 CETN2P41208 172 aa12.77□□□□□ -0.37
CHRNA1-205ENST00000409542 MLLT3P42568 568 aaPredicted RBP12.77□□□□□ -0.37
CHRNA1-205ENST00000409542 KCNJ1P48048 391 aa12.77□□□□□ -0.37
CHRNA1-205ENST00000409542 RPIAP49247 311 aa12.77□□□□□ -0.37
CHRNA1-205ENST00000409542 CORO7P57737 925 aa12.77□□□□□ -0.37
CHRNA1-205ENST00000409542 TAS2R40P59535 323 aa12.77□□□□□ -0.37
CHRNA1-205ENST00000409542 GNA12Q03113 381 aa12.77□□□□□ -0.37
CHRNA1-205ENST00000409542 CCNG2Q16589 344 aa12.77□□□□□ -0.37
CHRNA1-205ENST00000409542 C2CD6Q53TS8 623 aa12.77□□□□□ -0.37
CHRNA1-205ENST00000409542 USP53Q70EK8 1073 aa12.77□□□□□ -0.37
CHRNA1-205ENST00000409542 RAB11FIP2Q7L804 512 aa12.77□□□□□ -0.37
CHRNA1-205ENST00000409542 SDR16C5Q8N3Y7 309 aa12.77□□□□□ -0.37
CHRNA1-205ENST00000409542 RYBPQ8N488 228 aaPredicted RBP12.77□□□□□ -0.37
CHRNA1-205ENST00000409542 TP53I13Q8NBR0 393 aaPredicted RBP12.77□□□□□ -0.37
CHRNA1-205ENST00000409542 NETO2Q8NC67 525 aa12.77□□□□□ -0.37
CHRNA1-205ENST00000409542 BBOF1Q8ND07 529 aa12.77□□□□□ -0.37
CHRNA1-205ENST00000409542 DENND6BQ8NEG7 585 aa12.77□□□□□ -0.37
CHRNA1-205ENST00000409542 C1orf54Q8WWF1 131 aa12.77□□□□□ -0.37
CHRNA1-205ENST00000409542 GLMNQ92990 594 aa12.77□□□□□ -0.37
CHRNA1-205ENST00000409542 NAT6Q93015 286 aa12.77□□□□□ -0.37
CHRNA1-205ENST00000409542 TSACCQ96A04 125 aaPredicted RBP12.77□□□□□ -0.37
CHRNA1-205ENST00000409542 SGF29Q96ES7 293 aa12.77□□□□□ -0.37
CHRNA1-205ENST00000409542 RBM41Q96IZ5 413 aaKnown RBP12.77□□□□□ -0.37
CHRNA1-205ENST00000409542 KLHL32Q96NJ5 620 aa12.77□□□□□ -0.37
CHRNA1-205ENST00000409542 HERPUD2Q9BSE4 406 aa12.77□□□□□ -0.37
CHRNA1-205ENST00000409542 OSBPL8Q9BZF1 889 aa12.77□□□□□ -0.37
CHRNA1-205ENST00000409542 STMN4Q9H169 189 aaPredicted RBP12.77□□□□□ -0.37
CHRNA1-205ENST00000409542 PCDHGA7Q9Y5G6 932 aa12.77□□□□□ -0.37
CHRNA1-205ENST00000409542 NEMP1O14524 444 aa12.76□□□□□ -0.37
CHRNA1-205ENST00000409542 AREL1O15033 823 aa12.76□□□□□ -0.37
CHRNA1-205ENST00000409542 RIPK2O43353 540 aa12.76□□□□□ -0.37
CHRNA1-205ENST00000409542 SUV39H1O43463 412 aa12.76□□□□□ -0.37
CHRNA1-205ENST00000409542 GJB6O95452 261 aa12.76□□□□□ -0.37
CHRNA1-205ENST00000409542 FAM107AO95990 144 aa12.76□□□□□ -0.37
CHRNA1-205ENST00000409542 AGTP01019 485 aa12.76□□□□□ -0.37
CHRNA1-205ENST00000409542 SHBGP04278 402 aa12.76□□□□□ -0.37
CHRNA1-205ENST00000409542 UGT2B4P06133 528 aa12.76□□□□□ -0.37
CHRNA1-205ENST00000409542 ITIH1P19827 911 aa12.76□□□□□ -0.37
CHRNA1-205ENST00000409542 IVDP26440 423 aa12.76□□□□□ -0.37
CHRNA1-205ENST00000409542 ETV5P41161 510 aa12.76□□□□□ -0.37
CHRNA1-205ENST00000409542 THOP1P52888 689 aa12.76□□□□□ -0.37
CHRNA1-205ENST00000409542 COPS2P61201 443 aa12.76□□□□□ -0.37
CHRNA1-205ENST00000409542 MAGOHP61326 146 aaKnown RBP12.76□□□□□ -0.37
CHRNA1-205ENST00000409542 CYP4F2P78329 520 aa12.76□□□□□ -0.37
CHRNA1-205ENST00000409542 SLC20A2Q08357 652 aa12.76□□□□□ -0.37
CHRNA1-205ENST00000409542 PTK2BQ14289 1009 aa12.76□□□□□ -0.37
CHRNA1-205ENST00000409542 ODF2Q5BJF6 829 aa12.76□□□□□ -0.37
CHRNA1-205ENST00000409542 ZNF805Q5CZA5 627 aa12.76□□□□□ -0.37
CHRNA1-205ENST00000409542 ATXN7L2Q5T6C5 722 aaPredicted RBP12.76□□□□□ -0.37
CHRNA1-205ENST00000409542 ESRP1Q6NXG1 681 aaKnown RBP12.76□□□□□ -0.37
CHRNA1-205ENST00000409542 DNAJC24Q6P3W2 148 aa12.76□□□□□ -0.37
CHRNA1-205ENST00000409542 ZNF783Q6ZMS7 281 aa12.76□□□□□ -0.37
CHRNA1-205ENST00000409542 BNIPLQ7Z465 357 aa12.76□□□□□ -0.37
CHRNA1-205ENST00000409542 PHLDB2Q86SQ0 1253 aa12.76□□□□□ -0.37
CHRNA1-205ENST00000409542 VASH2Q86V25 355 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms