RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 KERAO60938 352 aa16.79■□□□□ 0.28
NUP50-203ENST00000407019 CLDN11O75508 207 aa16.79■□□□□ 0.28
NUP50-203ENST00000407019 GJB5O95377 273 aa16.79■□□□□ 0.28
NUP50-203ENST00000407019 RHOCP08134 193 aa16.79■□□□□ 0.28
NUP50-203ENST00000407019 HOXD10P28358 340 aa16.79■□□□□ 0.28
NUP50-203ENST00000407019 FMO4P31512 558 aa16.79■□□□□ 0.28
NUP50-203ENST00000407019 GRM2Q14416 872 aa16.79■□□□□ 0.28
NUP50-203ENST00000407019 GEN1Q17RS7 908 aa16.79■□□□□ 0.28
NUP50-203ENST00000407019 NPAS4Q8IUM7 802 aa16.79■□□□□ 0.28
NUP50-203ENST00000407019 DENND1CQ8IV53 801 aa16.79■□□□□ 0.28
NUP50-203ENST00000407019 LILRA2Q8N149 483 aa16.79■□□□□ 0.28
NUP50-203ENST00000407019 SNX31Q8N9S9 440 aa16.79■□□□□ 0.28
NUP50-203ENST00000407019 OR4K2Q8NGD2 314 aa16.79■□□□□ 0.28
NUP50-203ENST00000407019 TWIST2Q8WVJ9 160 aa16.79■□□□□ 0.28
NUP50-203ENST00000407019 LPGAT1Q92604 370 aa16.79■□□□□ 0.28
NUP50-203ENST00000407019 EXOC2Q96KP1 924 aa16.79■□□□□ 0.28
NUP50-203ENST00000407019 NSMCE3Q96MG7 304 aa16.79■□□□□ 0.28
NUP50-203ENST00000407019 PKP2Q99959 881 aa16.79■□□□□ 0.28
NUP50-203ENST00000407019 MRPL9Q9BYD2 267 aaKnown RBP16.79■□□□□ 0.28
NUP50-203ENST00000407019 DERL2Q9GZP9 239 aa16.79■□□□□ 0.28
NUP50-203ENST00000407019 Q9H521 79 aa16.79■□□□□ 0.28
NUP50-203ENST00000407019 AKTIPQ9H8T0 292 aa16.79■□□□□ 0.28
NUP50-203ENST00000407019 FBRSL1Q9HCM7 1045 aaKnown RBP16.79■□□□□ 0.28
NUP50-203ENST00000407019 SCUBE2Q9NQ36 999 aa16.79■□□□□ 0.28
NUP50-203ENST00000407019 TAS2R13Q9NYV9 303 aa16.79■□□□□ 0.28
NUP50-203ENST00000407019 HACD3Q9P035 362 aa16.79■□□□□ 0.28
NUP50-203ENST00000407019 CROTQ9UKG9 612 aa16.79■□□□□ 0.28
NUP50-203ENST00000407019 DNAJC15Q9Y5T4 150 aa16.79■□□□□ 0.28
NUP50-203ENST00000407019 LRRC14BA6NHZ5 514 aa16.79■□□□□ 0.28
NUP50-203ENST00000407019 SUPT3HB4E1H0 165 aa16.79■□□□□ 0.28
NUP50-203ENST00000407019 HOXA2O43364 376 aa16.79■□□□□ 0.28
NUP50-203ENST00000407019 SUPT3HO75486 399 aa16.79■□□□□ 0.28
NUP50-203ENST00000407019 NDUFS3O75489 264 aa16.79■□□□□ 0.28
NUP50-203ENST00000407019 ALDOCP09972 364 aaKnown RBP16.79■□□□□ 0.28
NUP50-203ENST00000407019 CR2P20023 1033 aa16.79■□□□□ 0.28
NUP50-203ENST00000407019 BFSP2Q13515 415 aa16.79■□□□□ 0.28
NUP50-203ENST00000407019 GPNMBQ14956 572 aa16.79■□□□□ 0.28
NUP50-203ENST00000407019 KANK2Q63ZY3 851 aa16.79■□□□□ 0.28
NUP50-203ENST00000407019 TICAM1Q8IUC6 712 aa16.79■□□□□ 0.28
NUP50-203ENST00000407019 FBXO22Q8NEZ5 403 aa16.79■□□□□ 0.28
NUP50-203ENST00000407019 OR9I1Q8NGQ6 314 aa16.79■□□□□ 0.28
NUP50-203ENST00000407019 STAG3L4Q8TBR4 150 aa16.79■□□□□ 0.28
NUP50-203ENST00000407019 BCL7CQ8WUZ0 217 aaPredicted RBP16.79■□□□□ 0.28
NUP50-203ENST00000407019 KIAA1191Q96A73 305 aa16.79■□□□□ 0.28
NUP50-203ENST00000407019 TCF12Q99081 682 aa16.79■□□□□ 0.28
NUP50-203ENST00000407019 TDRD1Q9BXT4 1180 aaKnown RBP16.79■□□□□ 0.28
NUP50-203ENST00000407019 RNF112Q9ULX5 631 aa16.79■□□□□ 0.28
NUP50-203ENST00000407019 ILVBLA1L0T0 632 aa16.78■□□□□ 0.28
NUP50-203ENST00000407019 C2orf81A6NN90 581 aa16.78■□□□□ 0.28
NUP50-203ENST00000407019 TBKBP1A7MCY6 615 aa16.78■□□□□ 0.28
NUP50-203ENST00000407019 DENRO43583 198 aaKnown RBP16.78■□□□□ 0.28
NUP50-203ENST00000407019 C8BP07358 591 aa16.78■□□□□ 0.28
NUP50-203ENST00000407019 GPX3P22352 226 aa16.78■□□□□ 0.28
NUP50-203ENST00000407019 CHN2P52757 468 aa16.78■□□□□ 0.28
NUP50-203ENST00000407019 ATP6V0D1P61421 351 aa16.78■□□□□ 0.28
NUP50-203ENST00000407019 RAD51Q06609 339 aa16.78■□□□□ 0.28
NUP50-203ENST00000407019 KIF19Q2TAC6 998 aa16.78■□□□□ 0.28
NUP50-203ENST00000407019 HECTD3Q5T447 861 aa16.78■□□□□ 0.28
NUP50-203ENST00000407019 PAQR3Q6TCH7 311 aa16.78■□□□□ 0.28
NUP50-203ENST00000407019 FBXO39Q8N4B4 442 aa16.78■□□□□ 0.28
NUP50-203ENST00000407019 MDGA1Q8NFP4 955 aa16.78■□□□□ 0.28
NUP50-203ENST00000407019 RAET1EQ8TD07 263 aa16.78■□□□□ 0.28
NUP50-203ENST00000407019 OVCA2Q8WZ82 227 aa16.78■□□□□ 0.28
NUP50-203ENST00000407019 SEPT8Q92599 483 aa16.78■□□□□ 0.28
NUP50-203ENST00000407019 PLD4Q96BZ4 506 aa16.78■□□□□ 0.28
NUP50-203ENST00000407019 CEP295NLQ96MC4 621 aa16.78■□□□□ 0.28
NUP50-203ENST00000407019 NSUN5Q96P11 429 aaKnown RBP16.78■□□□□ 0.28
NUP50-203ENST00000407019 AGO1Q9UL18 857 aaKnown RBP16.78■□□□□ 0.28
NUP50-203ENST00000407019 RAB26Q9ULW5 256 aa16.78■□□□□ 0.28
NUP50-203ENST00000407019 FAM50BQ9Y247 325 aa16.78■□□□□ 0.28
NUP50-203ENST00000407019 ANKRD36A6QL64 1941 aa16.78■□□□□ 0.28
NUP50-203ENST00000407019 CHD5Q8TDI0 1954 aa16.78■□□□□ 0.28
NUP50-203ENST00000407019 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.77■□□□□ 0.28
NUP50-203ENST00000407019 LCHNA4D1U4 455 aa16.77■□□□□ 0.28
NUP50-203ENST00000407019 ZNF840PA6NDX5 716 aa16.77■□□□□ 0.28
NUP50-203ENST00000407019 BBIP1A8MTZ0 92 aa16.77■□□□□ 0.28
NUP50-203ENST00000407019 PPP6CO00743 305 aa16.77■□□□□ 0.28
NUP50-203ENST00000407019 PIP5K1BO14986 540 aa16.77■□□□□ 0.28
NUP50-203ENST00000407019 ADAM12O43184 909 aa16.77■□□□□ 0.28
NUP50-203ENST00000407019 COCHO43405 550 aa16.77■□□□□ 0.28
NUP50-203ENST00000407019 CLASP2O75122 1294 aaKnown RBP16.77■□□□□ 0.28
NUP50-203ENST00000407019 PSMA3P25788 255 aa16.77■□□□□ 0.28
NUP50-203ENST00000407019 TRAP1Q12931 704 aaKnown RBP16.77■□□□□ 0.28
NUP50-203ENST00000407019 RALGDSQ12967 914 aa16.77■□□□□ 0.28
NUP50-203ENST00000407019 ZNF177Q13360 481 aaPredicted RBP16.77■□□□□ 0.28
NUP50-203ENST00000407019 TLR1Q15399 786 aa16.77■□□□□ 0.28
NUP50-203ENST00000407019 LHX8Q68G74 356 aa16.77■□□□□ 0.28
NUP50-203ENST00000407019 C8orf82Q6P1X6 216 aaPredicted RBP16.77■□□□□ 0.28
NUP50-203ENST00000407019 KLHDC10Q6PID8 442 aa16.77■□□□□ 0.28
NUP50-203ENST00000407019 UGT2A3Q6UWM9 527 aa16.77■□□□□ 0.28
NUP50-203ENST00000407019 CHST9Q7L1S5 443 aa16.77■□□□□ 0.28
NUP50-203ENST00000407019 MARVELD2Q8N4S9 558 aa16.77■□□□□ 0.28
NUP50-203ENST00000407019 LPCAT1Q8NF37 534 aa16.77■□□□□ 0.28
NUP50-203ENST00000407019 TRPC4APQ8TEL6 797 aa16.77■□□□□ 0.28
NUP50-203ENST00000407019 HHIPL1Q96JK4 782 aa16.77■□□□□ 0.28
NUP50-203ENST00000407019 CENPKQ9BS16 269 aa16.77■□□□□ 0.28
NUP50-203ENST00000407019 AHCYL1O43865 530 aa16.77■□□□□ 0.27
NUP50-203ENST00000407019 PRLP01236 227 aa16.77■□□□□ 0.27
NUP50-203ENST00000407019 CAPNS1P04632 268 aa16.77■□□□□ 0.27
NUP50-203ENST00000407019 FESP07332 822 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms