RNA–Protein interactions for RNA: ENST00000405600.5

CGREF1-206, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS P2 TSL 4 BASIC

Gene CGREF1, Length 1,346 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-206ENST00000405600 MUSKO15146 869 aa16.73■□□□□ 0.27
CGREF1-206ENST00000405600 SIN3BO75182 1162 aa16.73■□□□□ 0.27
CGREF1-206ENST00000405600 IGSF6O95976 241 aa16.73■□□□□ 0.27
CGREF1-206ENST00000405600 MT-ND3P03897 115 aa16.73■□□□□ 0.27
CGREF1-206ENST00000405600 SNRPAP09012 282 aaKnown RBP16.73■□□□□ 0.27
CGREF1-206ENST00000405600 GCAP28676 217 aa16.73■□□□□ 0.27
CGREF1-206ENST00000405600 HOXD12P35452 270 aa16.73■□□□□ 0.27
CGREF1-206ENST00000405600 STK19P49842 368 aaPredicted RBP16.73■□□□□ 0.27
CGREF1-206ENST00000405600 SNRPD1P62314 119 aaKnown RBP16.73■□□□□ 0.27
CGREF1-206ENST00000405600 DNAJC3Q13217 504 aa16.73■□□□□ 0.27
CGREF1-206ENST00000405600 SEPT6Q14141 434 aa16.73■□□□□ 0.27
CGREF1-206ENST00000405600 POU6F1Q14863 301 aa16.73■□□□□ 0.27
CGREF1-206ENST00000405600 C9orf64Q5T6V5 341 aa16.73■□□□□ 0.27
CGREF1-206ENST00000405600 LINGO4Q6UY18 593 aa16.73■□□□□ 0.27
CGREF1-206ENST00000405600 KDELC2Q7Z4H8 507 aa16.73■□□□□ 0.27
CGREF1-206ENST00000405600 RABEPKQ7Z6M1 372 aa16.73■□□□□ 0.27
CGREF1-206ENST00000405600 SRLQ86TD4 932 aa16.73■□□□□ 0.27
CGREF1-206ENST00000405600 TRABD2AQ86V40 505 aa16.73■□□□□ 0.27
CGREF1-206ENST00000405600 EXOC3L1Q86VI1 746 aa16.73■□□□□ 0.27
CGREF1-206ENST00000405600 HDDC3Q8N4P3 179 aa16.73■□□□□ 0.27
CGREF1-206ENST00000405600 ISG20Q96AZ6 181 aaKnown RBP16.73■□□□□ 0.27
CGREF1-206ENST00000405600 CNTNAP3BQ96NU0 1288 aa16.73■□□□□ 0.27
CGREF1-206ENST00000405600 SRPK1Q96SB4 655 aaKnown RBP16.73■□□□□ 0.27
CGREF1-206ENST00000405600 CNTNAP3Q9BZ76 1288 aa16.73■□□□□ 0.27
CGREF1-206ENST00000405600 CEP44Q9C0F1 390 aa16.73■□□□□ 0.27
CGREF1-206ENST00000405600 PCED1AQ9H1Q7 454 aa16.73■□□□□ 0.27
CGREF1-206ENST00000405600 NOD2Q9HC29 1040 aa16.73■□□□□ 0.27
CGREF1-206ENST00000405600 PSD3Q9NYI0 1048 aa16.73■□□□□ 0.27
CGREF1-206ENST00000405600 LHX3Q9UBR4 397 aa16.73■□□□□ 0.27
CGREF1-206ENST00000405600 CTNNAL1Q9UBT7 734 aa16.73■□□□□ 0.27
CGREF1-206ENST00000405600 SLCO3A1Q9UIG8 710 aa16.73■□□□□ 0.27
CGREF1-206ENST00000405600 LAMA1P25391 3075 aa16.73■□□□□ 0.27
CGREF1-206ENST00000405600 CRTAMO95727 393 aa16.72■□□□□ 0.27
CGREF1-206ENST00000405600 ADH1BP00325 375 aa16.72■□□□□ 0.27
CGREF1-206ENST00000405600 RPS14P62263 151 aaKnown RBP16.72■□□□□ 0.27
CGREF1-206ENST00000405600 RAD51Q06609 339 aa16.72■□□□□ 0.27
CGREF1-206ENST00000405600 GRM3Q14832 879 aa16.72■□□□□ 0.27
CGREF1-206ENST00000405600 EFTUD2Q15029 972 aaKnown RBP eCLIP16.72■□□□□ 0.271e-6■■■■□ 23.8
CGREF1-206ENST00000405600 UGP2Q16851 508 aa16.72■□□□□ 0.27
CGREF1-206ENST00000405600 ACCSLQ4AC99 568 aa16.72■□□□□ 0.27
CGREF1-206ENST00000405600 SIRPB2Q5JXA9 342 aa16.72■□□□□ 0.27
CGREF1-206ENST00000405600 NCEH1Q6PIU2 408 aa16.72■□□□□ 0.27
CGREF1-206ENST00000405600 SRRM1Q8IYB3 904 aaKnown RBP16.72■□□□□ 0.27
CGREF1-206ENST00000405600 DEFB124Q8NES8 71 aa16.72■□□□□ 0.27
CGREF1-206ENST00000405600 CALML6Q8TD86 181 aa16.72■□□□□ 0.27
CGREF1-206ENST00000405600 OR8D1Q8WZ84 308 aa16.72■□□□□ 0.27
CGREF1-206ENST00000405600 CPNE1Q99829 537 aa16.72■□□□□ 0.27
CGREF1-206ENST00000405600 CAPS2Q9BXY5 557 aa16.72■□□□□ 0.27
CGREF1-206ENST00000405600 TRABDQ9H4I3 376 aa16.72■□□□□ 0.27
CGREF1-206ENST00000405600 SSU72Q9NP77 194 aaKnown RBP16.72■□□□□ 0.27
CGREF1-206ENST00000405600 CHRAC1Q9NRG0 131 aa16.72■□□□□ 0.27
CGREF1-206ENST00000405600 C20orf96Q9NUD7 363 aaPredicted RBP16.72■□□□□ 0.27
CGREF1-206ENST00000405600 NKIRAS1Q9NYS0 192 aa16.72■□□□□ 0.27
CGREF1-206ENST00000405600 SUSD2Q9UGT4 822 aa16.72■□□□□ 0.27
CGREF1-206ENST00000405600 EIF2B4Q9UI10 523 aaKnown RBP16.72■□□□□ 0.27
CGREF1-206ENST00000405600 NCKAP1Q9Y2A7 1128 aa16.72■□□□□ 0.27
CGREF1-206ENST00000405600 PI4KAP42356 2102 aa16.72■□□□□ 0.27
CGREF1-206ENST00000405600 NCOR2Q9Y618 2525 aa16.72■□□□□ 0.27
CGREF1-206ENST00000405600 FAM47DPA6NHR8 397 aa16.71■□□□□ 0.27
CGREF1-206ENST00000405600 ARHGAP33O14559 1287 aa16.71■□□□□ 0.27
CGREF1-206ENST00000405600 CD160O95971 181 aa16.71■□□□□ 0.27
CGREF1-206ENST00000405600 SYPP08247 313 aa16.71■□□□□ 0.27
CGREF1-206ENST00000405600 BRAFP15056 766 aa16.71■□□□□ 0.27
CGREF1-206ENST00000405600 GP5P40197 560 aa16.71■□□□□ 0.27
CGREF1-206ENST00000405600 ATP1A2P50993 1020 aa16.71■□□□□ 0.27
CGREF1-206ENST00000405600 RPL26P61254 145 aaKnown RBP16.71■□□□□ 0.27
CGREF1-206ENST00000405600 PDE1BQ01064 536 aa16.71■□□□□ 0.27
CGREF1-206ENST00000405600 THOC5Q13769 683 aaKnown RBP16.71■□□□□ 0.27
CGREF1-206ENST00000405600 DLG2Q15700 870 aa16.71■□□□□ 0.27
CGREF1-206ENST00000405600 CST6Q15828 149 aa16.71■□□□□ 0.27
CGREF1-206ENST00000405600 GRTP1Q5TC63 336 aa16.71■□□□□ 0.27
CGREF1-206ENST00000405600 FAM46CQ5VWP2 391 aa16.71■□□□□ 0.27
CGREF1-206ENST00000405600 KIAA0930Q6ICG6 404 aaPredicted RBP16.71■□□□□ 0.27
CGREF1-206ENST00000405600 TRMT10BQ6PF06 316 aaKnown RBP16.71■□□□□ 0.27
CGREF1-206ENST00000405600 USP30Q70CQ3 517 aa16.71■□□□□ 0.27
CGREF1-206ENST00000405600 KCNMB4Q86W47 210 aa16.71■□□□□ 0.27
CGREF1-206ENST00000405600 LMNTD2Q8IXW0 634 aa16.71■□□□□ 0.27
CGREF1-206ENST00000405600 MINDY1Q8N5J2 469 aa16.71■□□□□ 0.27
CGREF1-206ENST00000405600 PAF1Q8N7H5 531 aa16.71■□□□□ 0.27
CGREF1-206ENST00000405600 CADM4Q8NFZ8 388 aa16.71■□□□□ 0.27
CGREF1-206ENST00000405600 FRS2Q8WU20 508 aa16.71■□□□□ 0.27
CGREF1-206ENST00000405600 FAM167BQ9BTA0 163 aa16.71■□□□□ 0.27
CGREF1-206ENST00000405600 TDRD1Q9BXT4 1180 aaKnown RBP16.71■□□□□ 0.27
CGREF1-206ENST00000405600 PLAC1Q9HBJ0 212 aa16.71■□□□□ 0.27
CGREF1-206ENST00000405600 KCNK9Q9NPC2 374 aa16.71■□□□□ 0.27
CGREF1-206ENST00000405600 HACD3Q9P035 362 aa16.71■□□□□ 0.27
CGREF1-206ENST00000405600 RIMKLBQ9ULI2 386 aa16.71■□□□□ 0.27
CGREF1-206ENST00000405600 RPL26L1Q9UNX3 145 aaKnown RBP16.71■□□□□ 0.27
CGREF1-206ENST00000405600 FCF1Q9Y324 198 aaKnown RBP16.71■□□□□ 0.27
CGREF1-206ENST00000405600 RAI2Q9Y5P3 530 aa16.71■□□□□ 0.27
CGREF1-206ENST00000405600 CKAP5Q14008 2032 aa16.71■□□□□ 0.27
CGREF1-206ENST00000405600 ZCWPW2A0A1B0GU75 182 aa16.7■□□□□ 0.26
CGREF1-206ENST00000405600 A0A1W2PQ67 120 aa16.7■□□□□ 0.26
CGREF1-206ENST00000405600 C1QTNF3-AMACRE9PGA6 284 aa16.7■□□□□ 0.26
CGREF1-206ENST00000405600 SOCS5O75159 536 aa16.7■□□□□ 0.26
CGREF1-206ENST00000405600 GSRP00390 522 aa16.7■□□□□ 0.26
CGREF1-206ENST00000405600 ATXN1LP0C7T5 689 aaKnown RBP16.7■□□□□ 0.26
CGREF1-206ENST00000405600 SRCP12931 536 aa16.7■□□□□ 0.26
CGREF1-206ENST00000405600 NMBRP28336 390 aa16.7■□□□□ 0.26
CGREF1-206ENST00000405600 ACSL1P33121 698 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms