RNA–Protein interactions for RNA: ENST00000403681.6

HMGA2-204, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HMGA2, Length 4,473 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-204ENST00000403681 NOBOXO60393 691 aa13.93□□□□□ -0.18
HMGA2-204ENST00000403681 ZNF286BP0CG31 522 aa13.93□□□□□ -0.18
HMGA2-204ENST00000403681 CD86P42081 329 aa13.93□□□□□ -0.18
HMGA2-204ENST00000403681 MAGEA6P43360 314 aa13.93□□□□□ -0.18
HMGA2-204ENST00000403681 SP2Q02086 613 aa13.93□□□□□ -0.18
HMGA2-204ENST00000403681 CELF3Q5SZQ8 465 aaKnown RBP13.93□□□□□ -0.18
HMGA2-204ENST00000403681 DEPDC1Q5TB30 811 aa13.93□□□□□ -0.18
HMGA2-204ENST00000403681 KIAA0408Q6ZU52 694 aa13.93□□□□□ -0.18
HMGA2-204ENST00000403681 GRIN3AQ8TCU5 1115 aa13.93□□□□□ -0.18
HMGA2-204ENST00000403681 MCOLN3Q8TDD5 553 aa13.93□□□□□ -0.18
HMGA2-204ENST00000403681 C18orf25Q96B23 403 aaPredicted RBP13.93□□□□□ -0.18
HMGA2-204ENST00000403681 ZNF347Q96SE7 839 aa13.93□□□□□ -0.18
HMGA2-204ENST00000403681 RBM4BQ9BQ04 359 aaKnown RBP13.93□□□□□ -0.18
HMGA2-204ENST00000403681 RBM4Q9BWF3 364 aaKnown RBP13.93□□□□□ -0.18
HMGA2-204ENST00000403681 RPF2Q9H7B2 306 aaKnown RBP13.93□□□□□ -0.18
HMGA2-204ENST00000403681 FZD1Q9UP38 647 aa13.93□□□□□ -0.18
HMGA2-204ENST00000403681 PCDHGA7Q9Y5G6 932 aa13.93□□□□□ -0.18
HMGA2-204ENST00000403681 TBX1O43435 398 aa13.93□□□□□ -0.18
HMGA2-204ENST00000403681 ATE1O95260 518 aa13.93□□□□□ -0.18
HMGA2-204ENST00000403681 UGT2B4P06133 528 aa13.93□□□□□ -0.18
HMGA2-204ENST00000403681 ELK4P28324 431 aa13.93□□□□□ -0.18
HMGA2-204ENST00000403681 ATP6V0D1P61421 351 aa13.93□□□□□ -0.18
HMGA2-204ENST00000403681 COPZ1P61923 177 aa13.93□□□□□ -0.18
HMGA2-204ENST00000403681 TUBA3CQ13748 450 aa13.93□□□□□ -0.18
HMGA2-204ENST00000403681 SH2D5Q6ZV89 423 aa13.93□□□□□ -0.18
HMGA2-204ENST00000403681 PLPPR4Q7Z2D5 763 aa13.93□□□□□ -0.18
HMGA2-204ENST00000403681 SPATA19Q7Z5L4 167 aa13.93□□□□□ -0.18
HMGA2-204ENST00000403681 UTP15Q8TED0 518 aaKnown RBP13.93□□□□□ -0.18
HMGA2-204ENST00000403681 ELMO1Q92556 727 aa13.93□□□□□ -0.18
HMGA2-204ENST00000403681 DUSP16Q9BY84 665 aa13.93□□□□□ -0.18
HMGA2-204ENST00000403681 ADAMTS10Q9H324 1103 aa13.93□□□□□ -0.18
HMGA2-204ENST00000403681 ZNF232Q9UNY5 417 aa13.93□□□□□ -0.18
HMGA2-204ENST00000403681 TAF1P21675 1872 aa13.93□□□□□ -0.18
HMGA2-204ENST00000403681 CCDC162PA2VCL2 907 aa13.93□□□□□ -0.18
HMGA2-204ENST00000403681 ZNF99A8MXY4 864 aaPredicted RBP13.93□□□□□ -0.18
HMGA2-204ENST00000403681 H3BRB1 525 aa13.93□□□□□ -0.18
HMGA2-204ENST00000403681 ZNF701M0R085 212 aaPredicted RBP13.93□□□□□ -0.18
HMGA2-204ENST00000403681 ABCB7O75027 752 aa13.93□□□□□ -0.18
HMGA2-204ENST00000403681 GNAO1P09471 354 aa13.93□□□□□ -0.18
HMGA2-204ENST00000403681 BMP2P12643 396 aa13.93□□□□□ -0.18
HMGA2-204ENST00000403681 IL7RP16871 459 aa13.93□□□□□ -0.18
HMGA2-204ENST00000403681 MYF6P23409 242 aa13.93□□□□□ -0.18
HMGA2-204ENST00000403681 TUBB3Q13509 450 aa13.93□□□□□ -0.18
HMGA2-204ENST00000403681 TRIP4Q15650 581 aaPredicted RBP13.93□□□□□ -0.18
HMGA2-204ENST00000403681 TAZQ16635 292 aa13.93□□□□□ -0.18
HMGA2-204ENST00000403681 RBM48Q5RL73 367 aaKnown RBP13.93□□□□□ -0.18
HMGA2-204ENST00000403681 GALNT5Q7Z7M9 940 aa13.93□□□□□ -0.18
HMGA2-204ENST00000403681 HEPHQ9BQS7 1158 aa13.93□□□□□ -0.18
HMGA2-204ENST00000403681 TRIM54Q9BYV2 358 aa13.93□□□□□ -0.18
HMGA2-204ENST00000403681 TUT1Q9H6E5 874 aaKnown RBP13.93□□□□□ -0.18
HMGA2-204ENST00000403681 ACTR8Q9H981 624 aa13.93□□□□□ -0.18
HMGA2-204ENST00000403681 EHD3Q9NZN3 535 aa13.93□□□□□ -0.18
HMGA2-204ENST00000403681 TLL2Q9Y6L7 1015 aa13.93□□□□□ -0.18
HMGA2-204ENST00000403681 C2orf81A6NN90 581 aa13.92□□□□□ -0.18
HMGA2-204ENST00000403681 BCKDKO14874 412 aa13.92□□□□□ -0.18
HMGA2-204ENST00000403681 CD3EAPO15446 510 aaKnown RBP13.92□□□□□ -0.18
HMGA2-204ENST00000403681 MLYCDO95822 493 aa13.92□□□□□ -0.18
HMGA2-204ENST00000403681 PTPRAP18433 802 aa13.92□□□□□ -0.18
HMGA2-204ENST00000403681 MAXP61244 160 aa13.92□□□□□ -0.18
HMGA2-204ENST00000403681 RABL3Q5HYI8 236 aa13.92□□□□□ -0.18
HMGA2-204ENST00000403681 WSCD1Q658N2 575 aa13.92□□□□□ -0.18
HMGA2-204ENST00000403681 GPSM1Q86YR5 675 aa13.92□□□□□ -0.18
HMGA2-204ENST00000403681 SIX5Q8N196 739 aa13.92□□□□□ -0.18
HMGA2-204ENST00000403681 OR6J1Q8NGC5 347 aa13.92□□□□□ -0.18
HMGA2-204ENST00000403681 SLC35F5Q8WV83 523 aa13.92□□□□□ -0.18
HMGA2-204ENST00000403681 TFAP2CQ92754 450 aa13.92□□□□□ -0.18
HMGA2-204ENST00000403681 SLC47A1Q96FL8 570 aa13.92□□□□□ -0.18
HMGA2-204ENST00000403681 TMEM106CQ9BVX2 250 aa13.92□□□□□ -0.18
HMGA2-204ENST00000403681 AP5M1Q9H0R1 490 aa13.92□□□□□ -0.18
HMGA2-204ENST00000403681 RNF11Q9Y3C5 154 aa13.92□□□□□ -0.18
HMGA2-204ENST00000403681 ANKRD12Q6UB98 2062 aa13.92□□□□□ -0.18
HMGA2-204ENST00000403681 TULP3O75386 442 aa13.92□□□□□ -0.18
HMGA2-204ENST00000403681 ZNF26P17031 533 aaPredicted RBP13.92□□□□□ -0.18
HMGA2-204ENST00000403681 SKIV2LQ15477 1246 aaKnown RBP13.92□□□□□ -0.18
HMGA2-204ENST00000403681 SLC22A16Q86VW1 577 aa13.92□□□□□ -0.18
HMGA2-204ENST00000403681 TRIM69Q86WT6 500 aa13.92□□□□□ -0.18
HMGA2-204ENST00000403681 RPRD1AQ96P16 312 aaPredicted RBP13.92□□□□□ -0.18
HMGA2-204ENST00000403681 FAM193BQ96PV7 902 aaPredicted RBP13.92□□□□□ -0.18
HMGA2-204ENST00000403681 PDZD7Q9H5P4 517 aa13.92□□□□□ -0.18
HMGA2-204ENST00000403681 SLC38A7Q9NVC3 462 aa13.92□□□□□ -0.18
HMGA2-204ENST00000403681 PCDHGB4Q9UN71 923 aa13.92□□□□□ -0.18
HMGA2-204ENST00000403681 SNX8Q9Y5X2 465 aa13.92□□□□□ -0.18
HMGA2-204ENST00000403681 UBXN8O00124 270 aa13.92□□□□□ -0.18
HMGA2-204ENST00000403681 CCL22O00626 93 aa13.92□□□□□ -0.18
HMGA2-204ENST00000403681 SEC22BO75396 215 aa13.92□□□□□ -0.18
HMGA2-204ENST00000403681 HLCSP50747 726 aa13.92□□□□□ -0.18
HMGA2-204ENST00000403681 ARPC4P59998 168 aa13.92□□□□□ -0.18
HMGA2-204ENST00000403681 MBTD1Q05BQ5 628 aa13.92□□□□□ -0.18
HMGA2-204ENST00000403681 CATSPERGQ6ZRH7 1159 aa13.92□□□□□ -0.18
HMGA2-204ENST00000403681 R3HCC1LQ7Z5L2 792 aaKnown RBP13.92□□□□□ -0.18
HMGA2-204ENST00000403681 TMEM102Q8N9M5 508 aaPredicted RBP13.92□□□□□ -0.18
HMGA2-204ENST00000403681 COLEC11Q9BWP8 271 aa13.92□□□□□ -0.18
HMGA2-204ENST00000403681 RERGLQ9H628 205 aa13.92□□□□□ -0.18
HMGA2-204ENST00000403681 TCRBV5S1A1TA0A578 114 aa13.92□□□□□ -0.18
HMGA2-204ENST00000403681 HMX2A2RU54 273 aa13.92□□□□□ -0.18
HMGA2-204ENST00000403681 HSF5Q4G112 596 aaPredicted RBP13.92□□□□□ -0.18
HMGA2-204ENST00000403681 RNF111Q6ZNA4 994 aa13.92□□□□□ -0.18
HMGA2-204ENST00000403681 GPRIN3Q6ZVF9 776 aa13.92□□□□□ -0.18
HMGA2-204ENST00000403681 MILR1Q7Z6M3 343 aa13.92□□□□□ -0.18
HMGA2-204ENST00000403681 TMEM135Q86UB9 458 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms