RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 NRG1Q02297 640 aaPredicted RBP18.15■□□□□ 0.5
COL18A1-204ENST00000400337 CA9Q16790 459 aa18.15■□□□□ 0.5
COL18A1-204ENST00000400337 NOL9Q5SY16 702 aaKnown RBP18.15■□□□□ 0.5
COL18A1-204ENST00000400337 BHLHB9Q6PI77 547 aa18.15■□□□□ 0.5
COL18A1-204ENST00000400337 NEK10Q6ZWH5 1172 aa18.15■□□□□ 0.5
COL18A1-204ENST00000400337 POMGNT2Q8NAT1 580 aa18.15■□□□□ 0.5
COL18A1-204ENST00000400337 C19orf60Q96EN9 201 aa18.15■□□□□ 0.5
COL18A1-204ENST00000400337 TSSK3Q96PN8 268 aa18.15■□□□□ 0.5
COL18A1-204ENST00000400337 AARSD1Q9BTE6 412 aaKnown RBP18.15■□□□□ 0.5
COL18A1-204ENST00000400337 ARIH1Q9Y4X5 557 aaPredicted RBP18.15■□□□□ 0.5
COL18A1-204ENST00000400337 TGDSO95455 350 aa18.15■□□□□ 0.5
COL18A1-204ENST00000400337 PAX7P23759 505 aa18.15■□□□□ 0.5
COL18A1-204ENST00000400337 RAB14P61106 215 aa18.15■□□□□ 0.5
COL18A1-204ENST00000400337 ESRP1Q6NXG1 681 aaKnown RBP18.15■□□□□ 0.5
COL18A1-204ENST00000400337 ECHDC2Q86YB7 292 aa18.15■□□□□ 0.5
COL18A1-204ENST00000400337 PHF10Q8WUB8 498 aaKnown RBP18.15■□□□□ 0.5
COL18A1-204ENST00000400337 TIFAQ96CG3 184 aa18.15■□□□□ 0.5
COL18A1-204ENST00000400337 TNKS2Q9H2K2 1166 aa18.15■□□□□ 0.5
COL18A1-204ENST00000400337 NMUR1Q9HB89 426 aa18.15■□□□□ 0.5
COL18A1-204ENST00000400337 HMGXB4Q9UGU5 601 aa18.15■□□□□ 0.5
COL18A1-204ENST00000400337 ZNF180Q9UJW8 692 aa18.15■□□□□ 0.5
COL18A1-204ENST00000400337 NMBRP28336 390 aa18.15■□□□□ 0.5
COL18A1-204ENST00000400337 USP46P62068 366 aa18.15■□□□□ 0.5
COL18A1-204ENST00000400337 STX4Q12846 297 aa18.15■□□□□ 0.5
COL18A1-204ENST00000400337 FAM192AQ9GZU8 254 aa18.15■□□□□ 0.5
COL18A1-204ENST00000400337 MIR1-1HGQ9H1L0 117 aa18.15■□□□□ 0.5
COL18A1-204ENST00000400337 GTF2IRD1Q9UHL9 959 aa18.15■□□□□ 0.5
COL18A1-204ENST00000400337 FBXW11Q9UKB1 542 aa18.15■□□□□ 0.5
COL18A1-204ENST00000400337 R3HCC1LQ7Z5L2 792 aaKnown RBP18.15■□□□□ 0.5
COL18A1-204ENST00000400337 ARMC8Q8IUR7 673 aa18.15■□□□□ 0.5
COL18A1-204ENST00000400337 REXO4Q9GZR2 422 aaKnown RBP18.15■□□□□ 0.5
COL18A1-204ENST00000400337 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.15■□□□□ 0.5
COL18A1-204ENST00000400337 KCTD5Q9NXV2 234 aa18.15■□□□□ 0.5
COL18A1-204ENST00000400337 TIMM22Q9Y584 194 aa18.15■□□□□ 0.5
COL18A1-204ENST00000400337 SMIM31A0A1B0GVY4 71 aa18.14■□□□□ 0.5
COL18A1-204ENST00000400337 GSAPA4D1B5 854 aa18.14■□□□□ 0.5
COL18A1-204ENST00000400337 CDH4P55283 916 aa18.14■□□□□ 0.5
COL18A1-204ENST00000400337 ABRAXAS1Q6UWZ7 409 aa18.14■□□□□ 0.5
COL18A1-204ENST00000400337 NPAS4Q8IUM7 802 aa18.14■□□□□ 0.5
COL18A1-204ENST00000400337 RTL3Q8N8U3 475 aaKnown RBP18.14■□□□□ 0.5
COL18A1-204ENST00000400337 TCF12Q99081 682 aa18.14■□□□□ 0.5
COL18A1-204ENST00000400337 IMP3Q9NV31 184 aaKnown RBP18.14■□□□□ 0.5
COL18A1-204ENST00000400337 ZSCAN32Q9NX65 697 aa18.14■□□□□ 0.5
COL18A1-204ENST00000400337 DEC1Q9P2X7 70 aa18.14■□□□□ 0.5
COL18A1-204ENST00000400337 SLIT2O94813 1529 aa18.14■□□□□ 0.49
COL18A1-204ENST00000400337 A0A1B0GVM2 712 aa18.14■□□□□ 0.49
COL18A1-204ENST00000400337 TCAF2A6NFQ2 919 aa18.14■□□□□ 0.49
COL18A1-204ENST00000400337 ZNF37AP17032 561 aaPredicted RBP18.14■□□□□ 0.49
COL18A1-204ENST00000400337 RPL17P18621 184 aaKnown RBP18.14■□□□□ 0.49
COL18A1-204ENST00000400337 SPIRE1Q08AE8 756 aa18.14■□□□□ 0.49
COL18A1-204ENST00000400337 FBXO48Q5FWF7 155 aa18.14■□□□□ 0.49
COL18A1-204ENST00000400337 SPANXN2Q5MJ10 180 aa18.14■□□□□ 0.49
COL18A1-204ENST00000400337 VWA5B1Q5TIE3 1220 aa18.14■□□□□ 0.49
COL18A1-204ENST00000400337 C7orf26Q96N11 449 aa18.14■□□□□ 0.49
COL18A1-204ENST00000400337 GRHL1Q9NZI5 618 aa18.14■□□□□ 0.49
COL18A1-204ENST00000400337 TBC1D14Q9P2M4 693 aa18.14■□□□□ 0.49
COL18A1-204ENST00000400337 ZNF490Q9ULM2 529 aaPredicted RBP18.14■□□□□ 0.49
COL18A1-204ENST00000400337 SAMHD1Q9Y3Z3 626 aaKnown RBP18.14■□□□□ 0.49
COL18A1-204ENST00000400337 OR10H2O60403 315 aa18.14■□□□□ 0.49
COL18A1-204ENST00000400337 OR6A2O95222 327 aa18.14■□□□□ 0.49
COL18A1-204ENST00000400337 ITGA2P17301 1181 aa18.14■□□□□ 0.49
COL18A1-204ENST00000400337 ALOX12P18054 663 aa18.14■□□□□ 0.49
COL18A1-204ENST00000400337 GSTM5P46439 218 aa18.14■□□□□ 0.49
COL18A1-204ENST00000400337 ARL13AQ5H913 290 aaPredicted RBP18.14■□□□□ 0.49
COL18A1-204ENST00000400337 OR10G6Q8NH81 332 aa18.14■□□□□ 0.49
COL18A1-204ENST00000400337 TMEM109Q9BVC6 243 aa18.14■□□□□ 0.49
COL18A1-204ENST00000400337 SPATA5L1Q9BVQ7 753 aa18.14■□□□□ 0.49
COL18A1-204ENST00000400337 IKZF3Q9UKT9 509 aa18.14■□□□□ 0.49
COL18A1-204ENST00000400337 GSC2O15499 205 aa18.14■□□□□ 0.49
COL18A1-204ENST00000400337 SPAM1P38567 509 aa18.14■□□□□ 0.49
COL18A1-204ENST00000400337 PTSQ03393 145 aa18.14■□□□□ 0.49
COL18A1-204ENST00000400337 TOP3AQ13472 1001 aaPredicted RBP18.14■□□□□ 0.49
COL18A1-204ENST00000400337 SOWAHAQ2M3V2 549 aa18.14■□□□□ 0.49
COL18A1-204ENST00000400337 FSTL4Q6MZW2 842 aa18.14■□□□□ 0.49
COL18A1-204ENST00000400337 PSMG2Q969U7 264 aa18.14■□□□□ 0.49
COL18A1-204ENST00000400337 RERGQ96A58 199 aaPredicted RBP18.14■□□□□ 0.49
COL18A1-204ENST00000400337 RSPH9Q9H1X1 276 aaPredicted RBP18.14■□□□□ 0.49
COL18A1-204ENST00000400337 DTLQ9NZJ0 730 aa18.14■□□□□ 0.49
COL18A1-204ENST00000400337 CACNG4Q9UBN1 327 aa18.14■□□□□ 0.49
COL18A1-204ENST00000400337 RPL26L1Q9UNX3 145 aaKnown RBP18.14■□□□□ 0.49
COL18A1-204ENST00000400337 RPTORQ8N122 1335 aa18.14■□□□□ 0.49
COL18A1-204ENST00000400337 TBC1D3DA0A087WVF3 549 aa18.13■□□□□ 0.49
COL18A1-204ENST00000400337 TBC1D3IA0A087WXS9 549 aa18.13■□□□□ 0.49
COL18A1-204ENST00000400337 TBC1D3EA0A087X179 549 aa18.13■□□□□ 0.49
COL18A1-204ENST00000400337 TBC1D3KA0A087X1G2 549 aa18.13■□□□□ 0.49
COL18A1-204ENST00000400337 TBC1D3FA6NER0 549 aaPredicted RBP18.13■□□□□ 0.49
COL18A1-204ENST00000400337 TBC1D3LB9A6J9 549 aa18.13■□□□□ 0.49
COL18A1-204ENST00000400337 DHX15O43143 795 aaKnown RBP18.13■□□□□ 0.49
COL18A1-204ENST00000400337 CDK14O94921 469 aa18.13■□□□□ 0.49
COL18A1-204ENST00000400337 TBC1D3HP0C7X1 549 aa18.13■□□□□ 0.49
COL18A1-204ENST00000400337 PBX3P40426 434 aa18.13■□□□□ 0.49
COL18A1-204ENST00000400337 GPD2P43304 727 aa18.13■□□□□ 0.49
COL18A1-204ENST00000400337 BIKQ13323 160 aa18.13■□□□□ 0.49
COL18A1-204ENST00000400337 PLA2G4EQ3MJ16 856 aa18.13■□□□□ 0.49
COL18A1-204ENST00000400337 TBC1D3GQ6DHY5 549 aa18.13■□□□□ 0.49
COL18A1-204ENST00000400337 TBC1D3CQ6IPX1 549 aa18.13■□□□□ 0.49
COL18A1-204ENST00000400337 COMMD2Q86X83 199 aa18.13■□□□□ 0.49
COL18A1-204ENST00000400337 TBC1D3Q8IZP1 549 aaPredicted RBP18.13■□□□□ 0.49
COL18A1-204ENST00000400337 HEXDCQ8WVB3 486 aa18.13■□□□□ 0.49
COL18A1-204ENST00000400337 APOLD1Q96LR9 279 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms