RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 PGK1P00558 417 aa17.06■□□□□ 0.32
PTPRA-205ENST00000399903 HOXA11P31270 313 aaPredicted RBP17.06■□□□□ 0.32
PTPRA-205ENST00000399903 NEK2P51955 445 aa17.06■□□□□ 0.32
PTPRA-205ENST00000399903 IST1P53990 364 aa17.06■□□□□ 0.32
PTPRA-205ENST00000399903 VBP1P61758 197 aa17.06■□□□□ 0.32
PTPRA-205ENST00000399903 ATP6AP1Q15904 470 aa17.06■□□□□ 0.32
PTPRA-205ENST00000399903 UBE2UQ5VVX9 321 aa17.06■□□□□ 0.32
PTPRA-205ENST00000399903 AKAP14Q86UN6 197 aa17.06■□□□□ 0.32
PTPRA-205ENST00000399903 LGI2Q8N0V4 545 aa17.06■□□□□ 0.32
PTPRA-205ENST00000399903 HGH1Q9BTY7 390 aa17.06■□□□□ 0.32
PTPRA-205ENST00000399903 ATP13A3Q9H7F0 1226 aa17.06■□□□□ 0.32
PTPRA-205ENST00000399903 NOTOA8MTQ0 251 aa17.06■□□□□ 0.32
PTPRA-205ENST00000399903 MDM4O15151 490 aa17.06■□□□□ 0.32
PTPRA-205ENST00000399903 TREHO43280 583 aa17.06■□□□□ 0.32
PTPRA-205ENST00000399903 NOBOXO60393 691 aa17.06■□□□□ 0.32
PTPRA-205ENST00000399903 GUCY1B2O75343 617 aa17.06■□□□□ 0.32
PTPRA-205ENST00000399903 CCT8P50990 548 aa17.06■□□□□ 0.32
PTPRA-205ENST00000399903 ARPC4P59998 168 aa17.06■□□□□ 0.32
PTPRA-205ENST00000399903 PITX1P78337 314 aaPredicted RBP17.06■□□□□ 0.32
PTPRA-205ENST00000399903 SOWAHAQ2M3V2 549 aa17.06■□□□□ 0.32
PTPRA-205ENST00000399903 ATAD3BQ5T9A4 648 aa17.06■□□□□ 0.32
PTPRA-205ENST00000399903 ARHGAP17Q68EM7 881 aa17.06■□□□□ 0.32
PTPRA-205ENST00000399903 NEPROQ6NW34 567 aa17.06■□□□□ 0.32
PTPRA-205ENST00000399903 ZC3HC1Q86WB0 502 aaKnown RBP17.06■□□□□ 0.32
PTPRA-205ENST00000399903 VRTNQ9H8Y1 702 aa17.06■□□□□ 0.32
PTPRA-205ENST00000399903 ARMC1Q9NVT9 282 aa17.06■□□□□ 0.32
PTPRA-205ENST00000399903 NUDT5Q9UKK9 219 aa17.06■□□□□ 0.32
PTPRA-205ENST00000399903 A0A0G2JMZ2 1700 aa17.05■□□□□ 0.32
PTPRA-205ENST00000399903 KPNA6O60684 536 aa17.05■□□□□ 0.32
PTPRA-205ENST00000399903 MYL3P08590 195 aa17.05■□□□□ 0.32
PTPRA-205ENST00000399903 LMO2P25791 158 aa17.05■□□□□ 0.32
PTPRA-205ENST00000399903 TRPC1P48995 793 aa17.05■□□□□ 0.32
PTPRA-205ENST00000399903 SULT1E1P49888 294 aa17.05■□□□□ 0.32
PTPRA-205ENST00000399903 TSTD2Q5T7W7 516 aa17.05■□□□□ 0.32
PTPRA-205ENST00000399903 ADAMTS16Q8TE57 1224 aa17.05■□□□□ 0.32
PTPRA-205ENST00000399903 TNPO2O14787 897 aaKnown RBP17.05■□□□□ 0.32
PTPRA-205ENST00000399903 SNPHO15079 494 aa17.05■□□□□ 0.32
PTPRA-205ENST00000399903 HTR1BP28222 390 aa17.05■□□□□ 0.32
PTPRA-205ENST00000399903 TAS2R39P59534 338 aa17.05■□□□□ 0.32
PTPRA-205ENST00000399903 FRG1Q14331 258 aaKnown RBP17.05■□□□□ 0.32
PTPRA-205ENST00000399903 DPYSL2Q16555 572 aa17.05■□□□□ 0.32
PTPRA-205ENST00000399903 DUSP28Q4G0W2 176 aa17.05■□□□□ 0.32
PTPRA-205ENST00000399903 RSBN1Q5VWQ0 802 aaPredicted RBP17.05■□□□□ 0.32
PTPRA-205ENST00000399903 PAGE2Q7Z2X7 111 aa17.05■□□□□ 0.32
PTPRA-205ENST00000399903 PLEKHH3Q7Z736 793 aa17.05■□□□□ 0.32
PTPRA-205ENST00000399903 PSTKQ8IV42 348 aaKnown RBP17.05■□□□□ 0.32
PTPRA-205ENST00000399903 CCDC103Q8IW40 242 aa17.05■□□□□ 0.32
PTPRA-205ENST00000399903 ADGRG5Q8IZF4 528 aa17.05■□□□□ 0.32
PTPRA-205ENST00000399903 TMEM151AQ8N4L1 468 aa17.05■□□□□ 0.32
PTPRA-205ENST00000399903 POC5Q8NA72 575 aa17.05■□□□□ 0.32
PTPRA-205ENST00000399903 TRPV3Q8NET8 790 aa17.05■□□□□ 0.32
PTPRA-205ENST00000399903 FEM1CQ96JP0 617 aa17.05■□□□□ 0.32
PTPRA-205ENST00000399903 SPATA17Q96L03 361 aa17.05■□□□□ 0.32
PTPRA-205ENST00000399903 UHRF1Q96T88 793 aaPredicted RBP17.05■□□□□ 0.32
PTPRA-205ENST00000399903 KCTD14Q9BQ13 255 aaPredicted RBP17.05■□□□□ 0.32
PTPRA-205ENST00000399903 GDAP2Q9NXN4 497 aa17.05■□□□□ 0.32
PTPRA-205ENST00000399903 BTRCQ9Y297 605 aa17.05■□□□□ 0.32
PTPRA-205ENST00000399903 ANKRD34BA5PLL1 514 aa17.04■□□□□ 0.32
PTPRA-205ENST00000399903 TAF4O00268 1085 aa17.04■□□□□ 0.32
PTPRA-205ENST00000399903 RECQL4O94761 1208 aa17.04■□□□□ 0.32
PTPRA-205ENST00000399903 SMIM10L2AP0DMW4 78 aa17.04■□□□□ 0.32
PTPRA-205ENST00000399903 SMIM10L2BP0DMW5 78 aa17.04■□□□□ 0.32
PTPRA-205ENST00000399903 ECT2LQ008S8 904 aa17.04■□□□□ 0.32
PTPRA-205ENST00000399903 NFYCQ13952 458 aa17.04■□□□□ 0.32
PTPRA-205ENST00000399903 LINC01465Q8N7H1 131 aa17.04■□□□□ 0.32
PTPRA-205ENST00000399903 NDNFQ8TB73 568 aa17.04■□□□□ 0.32
PTPRA-205ENST00000399903 CALML6Q8TD86 181 aa17.04■□□□□ 0.32
PTPRA-205ENST00000399903 FAR2Q96K12 515 aa17.04■□□□□ 0.32
PTPRA-205ENST00000399903 CD320Q9NPF0 282 aa17.04■□□□□ 0.32
PTPRA-205ENST00000399903 AASSQ9UDR5 926 aa17.04■□□□□ 0.32
PTPRA-205ENST00000399903 ANAPC2Q9UJX6 822 aa17.04■□□□□ 0.32
PTPRA-205ENST00000399903 MSI1O43347 362 aaKnown RBP17.04■□□□□ 0.32
PTPRA-205ENST00000399903 NFKB1P19838 968 aa17.04■□□□□ 0.32
PTPRA-205ENST00000399903 AGXTP21549 392 aa17.04■□□□□ 0.32
PTPRA-205ENST00000399903 RBP5P82980 135 aa17.04■□□□□ 0.32
PTPRA-205ENST00000399903 RALGPS2Q86X27 583 aaPredicted RBP17.04■□□□□ 0.32
PTPRA-205ENST00000399903 PACRGLQ8N7B6 248 aa17.04■□□□□ 0.32
PTPRA-205ENST00000399903 C3orf30Q96M34 536 aa17.04■□□□□ 0.32
PTPRA-205ENST00000399903 PARVBQ9HBI1 364 aa17.04■□□□□ 0.32
PTPRA-205ENST00000399903 CMTM6Q9NX76 183 aa17.04■□□□□ 0.32
PTPRA-205ENST00000399903 NDUFAF1Q9Y375 327 aa17.04■□□□□ 0.32
PTPRA-205ENST00000399903 NUP205Q92621 2012 aa17.04■□□□□ 0.32
PTPRA-205ENST00000399903 TRIM64CA6NLI5 447 aa17.04■□□□□ 0.32
PTPRA-205ENST00000399903 MEIS3P2A8K0S8 358 aa17.04■□□□□ 0.32
PTPRA-205ENST00000399903 AXIN1O15169 862 aa17.04■□□□□ 0.32
PTPRA-205ENST00000399903 ACOX3O15254 700 aa17.04■□□□□ 0.32
PTPRA-205ENST00000399903 ASNA1O43681 348 aa17.04■□□□□ 0.32
PTPRA-205ENST00000399903 SNX2O60749 519 aa17.04■□□□□ 0.32
PTPRA-205ENST00000399903 PFKMP08237 780 aa17.04■□□□□ 0.32
PTPRA-205ENST00000399903 ENO2P09104 434 aaPredicted RBP17.04■□□□□ 0.32
PTPRA-205ENST00000399903 RAB10P61026 200 aa17.04■□□□□ 0.32
PTPRA-205ENST00000399903 ARL13BQ3SXY8 428 aa17.04■□□□□ 0.32
PTPRA-205ENST00000399903 PIWIL4Q7Z3Z4 852 aaKnown RBP17.04■□□□□ 0.32
PTPRA-205ENST00000399903 RNF139Q8WU17 664 aa17.04■□□□□ 0.32
PTPRA-205ENST00000399903 TUBGCP3Q96CW5 907 aa17.04■□□□□ 0.32
PTPRA-205ENST00000399903 C1QTNF1Q9BXJ1 281 aa17.04■□□□□ 0.32
PTPRA-205ENST00000399903 WDR12Q9GZL7 423 aaKnown RBP17.04■□□□□ 0.32
PTPRA-205ENST00000399903 TRIP12Q14669 1992 aaPredicted RBP17.03■□□□□ 0.32
PTPRA-205ENST00000399903 GNGT2O14610 69 aa17.03■□□□□ 0.32
PTPRA-205ENST00000399903 TBX1O43435 398 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms