RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 COL6A1P12109 1028 aa14.2□□□□□ -0.14
PCDHGA11-201ENST00000398587 HPGDP15428 266 aa14.2□□□□□ -0.14
PCDHGA11-201ENST00000398587 ATP6V1C1P21283 382 aa14.2□□□□□ -0.14
PCDHGA11-201ENST00000398587 C15orf39Q6ZRI6 1047 aa14.2□□□□□ -0.14
PCDHGA11-201ENST00000398587 HFE2Q6ZVN8 426 aa14.2□□□□□ -0.14
PCDHGA11-201ENST00000398587 MAGEE2Q8TD90 523 aaPredicted RBP14.2□□□□□ -0.14
PCDHGA11-201ENST00000398587 AZIN2Q96A70 460 aa14.2□□□□□ -0.14
PCDHGA11-201ENST00000398587 NPY6RQ99463 290 aa14.2□□□□□ -0.14
PCDHGA11-201ENST00000398587 PAPOLBQ9NRJ5 636 aaKnown RBP14.2□□□□□ -0.14
PCDHGA11-201ENST00000398587 CNTN6Q9UQ52 1028 aa14.2□□□□□ -0.14
PCDHGA11-201ENST00000398587 GOLGA4Q13439 2230 aaKnown RBP14.2□□□□□ -0.14
PCDHGA11-201ENST00000398587 KRT87PA6NCN2 255 aa14.19□□□□□ -0.14
PCDHGA11-201ENST00000398587 SLC20A2Q08357 652 aa14.19□□□□□ -0.14
PCDHGA11-201ENST00000398587 C1DQ13901 141 aaKnown RBP14.19□□□□□ -0.14
PCDHGA11-201ENST00000398587 GSTA3Q16772 222 aa14.19□□□□□ -0.14
PCDHGA11-201ENST00000398587 TAPT1Q6NXT6 567 aa14.19□□□□□ -0.14
PCDHGA11-201ENST00000398587 TCAIMQ8N3R3 496 aa14.19□□□□□ -0.14
PCDHGA11-201ENST00000398587 CNTD1Q8N815 330 aa14.19□□□□□ -0.14
PCDHGA11-201ENST00000398587 NPAS2Q99743 824 aa14.19□□□□□ -0.14
PCDHGA11-201ENST00000398587 RIBC2Q9H4K1 309 aa14.19□□□□□ -0.14
PCDHGA11-201ENST00000398587 DDX28Q9NUL7 540 aaKnown RBP14.19□□□□□ -0.14
PCDHGA11-201ENST00000398587 DEC1Q9P2X7 70 aa14.19□□□□□ -0.14
PCDHGA11-201ENST00000398587 LZTS1Q9Y250 596 aa14.19□□□□□ -0.14
PCDHGA11-201ENST00000398587 ARHGEF9O43307 516 aa14.19□□□□□ -0.14
PCDHGA11-201ENST00000398587 FAM20BO75063 409 aa14.19□□□□□ -0.14
PCDHGA11-201ENST00000398587 GOT2P00505 430 aaKnown RBP14.19□□□□□ -0.14
PCDHGA11-201ENST00000398587 GNRH1P01148 92 aa14.19□□□□□ -0.14
PCDHGA11-201ENST00000398587 PSMB9P28065 219 aa14.19□□□□□ -0.14
PCDHGA11-201ENST00000398587 NCF4Q15080 339 aa14.19□□□□□ -0.14
PCDHGA11-201ENST00000398587 KRT73Q86Y46 540 aa14.19□□□□□ -0.14
PCDHGA11-201ENST00000398587 NAT16Q8N8M0 369 aa14.19□□□□□ -0.14
PCDHGA11-201ENST00000398587 ARL14EPQ8N8R7 260 aaPredicted RBP14.19□□□□□ -0.14
PCDHGA11-201ENST00000398587 FEM1CQ96JP0 617 aa14.19□□□□□ -0.14
PCDHGA11-201ENST00000398587 RHOBTB2Q9BYZ6 727 aa14.19□□□□□ -0.14
PCDHGA11-201ENST00000398587 GRIN2DO15399 1336 aa14.19□□□□□ -0.14
PCDHGA11-201ENST00000398587 ARVCFO00192 962 aa14.19□□□□□ -0.14
PCDHGA11-201ENST00000398587 PIRO00625 290 aa14.19□□□□□ -0.14
PCDHGA11-201ENST00000398587 GABRDO14764 452 aa14.19□□□□□ -0.14
PCDHGA11-201ENST00000398587 MAP3K13O43283 966 aa14.19□□□□□ -0.14
PCDHGA11-201ENST00000398587 CHN2P52757 468 aa14.19□□□□□ -0.14
PCDHGA11-201ENST00000398587 MLLT6P55198 1093 aaPredicted RBP14.19□□□□□ -0.14
PCDHGA11-201ENST00000398587 SKP1P63208 163 aa14.19□□□□□ -0.14
PCDHGA11-201ENST00000398587 LCP2Q13094 533 aa14.19□□□□□ -0.14
PCDHGA11-201ENST00000398587 RFTN1Q14699 578 aaPredicted RBP14.19□□□□□ -0.14
PCDHGA11-201ENST00000398587 CYP20A1Q6UW02 462 aa14.19□□□□□ -0.14
PCDHGA11-201ENST00000398587 PAGE2Q7Z2X7 111 aa14.19□□□□□ -0.14
PCDHGA11-201ENST00000398587 C10orf53Q8N6V4 93 aa14.19□□□□□ -0.14
PCDHGA11-201ENST00000398587 ZFYVE19Q96K21 471 aa14.19□□□□□ -0.14
PCDHGA11-201ENST00000398587 STRA6Q9BX79 667 aa14.19□□□□□ -0.14
PCDHGA11-201ENST00000398587 NLNQ9BYT8 704 aa14.19□□□□□ -0.14
PCDHGA11-201ENST00000398587 CLIC5Q9NZA1 410 aa14.19□□□□□ -0.14
PCDHGA11-201ENST00000398587 IGKV6D-21A0A0A0MT36 114 aa14.19□□□□□ -0.14
PCDHGA11-201ENST00000398587 STK16O75716 305 aa14.19□□□□□ -0.14
PCDHGA11-201ENST00000398587 PRAMEF1O95521 474 aa14.19□□□□□ -0.14
PCDHGA11-201ENST00000398587 GRIA1P42261 906 aa14.19□□□□□ -0.14
PCDHGA11-201ENST00000398587 RANBP1P43487 201 aa14.19□□□□□ -0.14
PCDHGA11-201ENST00000398587 TPGS2Q68CL5 300 aa14.19□□□□□ -0.14
PCDHGA11-201ENST00000398587 CHPFQ8IZ52 775 aa14.19□□□□□ -0.14
PCDHGA11-201ENST00000398587 DCAKDQ8WVC6 231 aa14.19□□□□□ -0.14
PCDHGA11-201ENST00000398587 RORBQ92753 470 aa14.19□□□□□ -0.14
PCDHGA11-201ENST00000398587 USE1Q9NZ43 259 aa14.19□□□□□ -0.14
PCDHGA11-201ENST00000398587 PSMD13Q9UNM6 376 aa14.19□□□□□ -0.14
PCDHGA11-201ENST00000398587 MYH3P11055 1940 aa14.19□□□□□ -0.14
PCDHGA11-201ENST00000398587 C4BP0C0L5 1744 aa14.18□□□□□ -0.14
PCDHGA11-201ENST00000398587 ESR1P03372 595 aa14.18□□□□□ -0.14
PCDHGA11-201ENST00000398587 SERPINB1P30740 379 aa14.18□□□□□ -0.14
PCDHGA11-201ENST00000398587 NTSP30990 170 aa14.18□□□□□ -0.14
PCDHGA11-201ENST00000398587 CRATP43155 626 aa14.18□□□□□ -0.14
PCDHGA11-201ENST00000398587 CHRNA4P43681 627 aa14.18□□□□□ -0.14
PCDHGA11-201ENST00000398587 XIAPP98170 497 aa14.18□□□□□ -0.14
PCDHGA11-201ENST00000398587 PAFAH1B3Q15102 231 aaKnown RBP14.18□□□□□ -0.14
PCDHGA11-201ENST00000398587 FGD3Q5JSP0 725 aa14.18□□□□□ -0.14
PCDHGA11-201ENST00000398587 GK5Q6ZS86 529 aa14.18□□□□□ -0.14
PCDHGA11-201ENST00000398587 OTOP2Q7RTS6 562 aa14.18□□□□□ -0.14
PCDHGA11-201ENST00000398587 CDK20Q8IZL9 346 aa14.18□□□□□ -0.14
PCDHGA11-201ENST00000398587 PQLC1Q8N2U9 271 aa14.18□□□□□ -0.14
PCDHGA11-201ENST00000398587 NELL1Q92832 810 aa14.18□□□□□ -0.14
PCDHGA11-201ENST00000398587 OR52E6Q96RD3 313 aa14.18□□□□□ -0.14
PCDHGA11-201ENST00000398587 KLHL20Q9Y2M5 609 aa14.18□□□□□ -0.14
PCDHGA11-201ENST00000398587 UBR2Q8IWV8 1755 aa14.18□□□□□ -0.14
PCDHGA11-201ENST00000398587 IGKV6-21A0A0C4DH24 114 aa14.18□□□□□ -0.14
PCDHGA11-201ENST00000398587 GNPDA1P46926 289 aa14.18□□□□□ -0.14
PCDHGA11-201ENST00000398587 VWA5B1Q5TIE3 1220 aa14.18□□□□□ -0.14
PCDHGA11-201ENST00000398587 B3GNT9Q6UX72 402 aa14.18□□□□□ -0.14
PCDHGA11-201ENST00000398587 SMOQ99835 787 aa14.18□□□□□ -0.14
PCDHGA11-201ENST00000398587 NUDT4Q9NZJ9 180 aa14.18□□□□□ -0.14
PCDHGA11-201ENST00000398587 ASF1AQ9Y294 204 aa14.18□□□□□ -0.14
PCDHGA11-201ENST00000398587 TEX264Q9Y6I9 313 aa14.18□□□□□ -0.14
PCDHGA11-201ENST00000398587 RGS5O15539 181 aa14.18□□□□□ -0.14
PCDHGA11-201ENST00000398587 NPHS1O60500 1241 aa14.18□□□□□ -0.14
PCDHGA11-201ENST00000398587 FGBP02675 491 aa14.18□□□□□ -0.14
PCDHGA11-201ENST00000398587 SOX6P35712 828 aa14.18□□□□□ -0.14
PCDHGA11-201ENST00000398587 CASP12Q6UXS9 341 aa14.18□□□□□ -0.14
PCDHGA11-201ENST00000398587 CLVS1Q8IUQ0 354 aaPredicted RBP14.18□□□□□ -0.14
PCDHGA11-201ENST00000398587 C8orf59Q8N0T1 100 aaPredicted RBP14.18□□□□□ -0.14
PCDHGA11-201ENST00000398587 CYP4Z2PQ8N1L4 340 aa14.18□□□□□ -0.14
PCDHGA11-201ENST00000398587 MPP5Q8N3R9 675 aa14.18□□□□□ -0.14
PCDHGA11-201ENST00000398587 ZNF781Q8N8C0 355 aa14.18□□□□□ -0.14
PCDHGA11-201ENST00000398587 TWIST2Q8WVJ9 160 aa14.18□□□□□ -0.14
PCDHGA11-201ENST00000398587 ZNF599Q96NL3 588 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms