RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 TTC27Q6P3X3 843 aa16.5■□□□□ 0.23
CXCL1-201ENST00000395761 MACC1Q6ZN28 852 aa16.5■□□□□ 0.23
CXCL1-201ENST00000395761 ZNF765Q7L2R6 523 aa16.5■□□□□ 0.23
CXCL1-201ENST00000395761 KANSL1Q7Z3B3 1105 aa16.5■□□□□ 0.23
CXCL1-201ENST00000395761 PARGQ86W56 976 aa16.5■□□□□ 0.23
CXCL1-201ENST00000395761 NRSN1Q8IZ57 195 aa16.5■□□□□ 0.23
CXCL1-201ENST00000395761 TTC30BQ8N4P2 665 aa16.5■□□□□ 0.23
CXCL1-201ENST00000395761 OXR1Q8N573 874 aa16.5■□□□□ 0.23
CXCL1-201ENST00000395761 DEFB124Q8NES8 71 aa16.5■□□□□ 0.23
CXCL1-201ENST00000395761 BLOC1S5Q8TDH9 187 aa16.5■□□□□ 0.23
CXCL1-201ENST00000395761 MAGOHBQ96A72 148 aaKnown RBP16.5■□□□□ 0.23
CXCL1-201ENST00000395761 PPP1R2P1Q96PQ5 205 aa16.5■□□□□ 0.23
CXCL1-201ENST00000395761 TBL1YQ9BQ87 522 aa16.5■□□□□ 0.23
CXCL1-201ENST00000395761 TCEAL2Q9H3H9 227 aaPredicted RBP16.5■□□□□ 0.23
CXCL1-201ENST00000395761 L2HGDHQ9H9P8 463 aa16.5■□□□□ 0.23
CXCL1-201ENST00000395761 UCKL1Q9NWZ5 548 aa16.5■□□□□ 0.23
CXCL1-201ENST00000395761 PKD2L2Q9NZM6 624 aa16.5■□□□□ 0.23
CXCL1-201ENST00000395761 BTBD3Q9Y2F9 522 aa16.5■□□□□ 0.23
CXCL1-201ENST00000395761 PCDHGB2Q9Y5G2 931 aa16.5■□□□□ 0.23
CXCL1-201ENST00000395761 TMEM202A6NGA9 273 aa16.49■□□□□ 0.23
CXCL1-201ENST00000395761 BUD23O43709 281 aaKnown RBP16.49■□□□□ 0.23
CXCL1-201ENST00000395761 AP2A1O95782 977 aa16.49■□□□□ 0.23
CXCL1-201ENST00000395761 CSF2P04141 144 aa16.49■□□□□ 0.23
CXCL1-201ENST00000395761 HOXC4P09017 264 aaPredicted RBP16.49■□□□□ 0.23
CXCL1-201ENST00000395761 TSHRP16473 764 aa16.49■□□□□ 0.23
CXCL1-201ENST00000395761 GPR1P46091 355 aa16.49■□□□□ 0.23
CXCL1-201ENST00000395761 MSLNQ13421 630 aaPredicted RBP16.49■□□□□ 0.23
CXCL1-201ENST00000395761 SUZ12Q15022 739 aaKnown RBP16.49■□□□□ 0.23
CXCL1-201ENST00000395761 ENPP7Q6UWV6 458 aa16.49■□□□□ 0.23
CXCL1-201ENST00000395761 GSTA5Q7RTV2 222 aa16.49■□□□□ 0.23
CXCL1-201ENST00000395761 NLRP8Q86W28 1048 aa16.49■□□□□ 0.23
CXCL1-201ENST00000395761 HEATR4Q86WZ0 1026 aa16.49■□□□□ 0.23
CXCL1-201ENST00000395761 RAVER1Q8IY67 606 aaKnown RBP16.49■□□□□ 0.23
CXCL1-201ENST00000395761 RBFAQ8N0V3 343 aa16.49■□□□□ 0.23
CXCL1-201ENST00000395761 SLC25A45Q8N413 288 aa16.49■□□□□ 0.23
CXCL1-201ENST00000395761 GPR26Q8NDV2 337 aa16.49■□□□□ 0.23
CXCL1-201ENST00000395761 SETD7Q8WTS6 366 aaKnown RBP16.49■□□□□ 0.23
CXCL1-201ENST00000395761 TSACCQ96A04 125 aaPredicted RBP16.49■□□□□ 0.23
CXCL1-201ENST00000395761 SRPK1Q96SB4 655 aaKnown RBP16.49■□□□□ 0.23
CXCL1-201ENST00000395761 TEX101Q9BY14 249 aa16.49■□□□□ 0.23
CXCL1-201ENST00000395761 FAM83DQ9H4H8 585 aa16.49■□□□□ 0.23
CXCL1-201ENST00000395761 WDR26Q9H7D7 661 aa16.49■□□□□ 0.23
CXCL1-201ENST00000395761 LRRC40Q9H9A6 602 aa16.49■□□□□ 0.23
CXCL1-201ENST00000395761 BPIFA1Q9NP55 256 aa16.49■□□□□ 0.23
CXCL1-201ENST00000395761 CABIN1Q9Y6J0 2220 aa16.48■□□□□ 0.23
CXCL1-201ENST00000395761 GOLGA6L10A0A0M3HER8 536 aa16.48■□□□□ 0.23
CXCL1-201ENST00000395761 RGSL1A5PLK6 1076 aa16.48■□□□□ 0.23
CXCL1-201ENST00000395761 CCDC188H7C350 402 aa16.48■□□□□ 0.23
CXCL1-201ENST00000395761 CACNB4O00305 520 aaPredicted RBP16.48■□□□□ 0.23
CXCL1-201ENST00000395761 GIPC1O14908 333 aa16.48■□□□□ 0.23
CXCL1-201ENST00000395761 NME1P15531 152 aaKnown RBP16.48■□□□□ 0.23
CXCL1-201ENST00000395761 BPIP17213 487 aa16.48■□□□□ 0.23
CXCL1-201ENST00000395761 JUNDP17535 347 aa16.48■□□□□ 0.23
CXCL1-201ENST00000395761 TPH1P17752 444 aa16.48■□□□□ 0.23
CXCL1-201ENST00000395761 HTR1BP28222 390 aa16.48■□□□□ 0.23
CXCL1-201ENST00000395761 ACTN2P35609 894 aa16.48■□□□□ 0.23
CXCL1-201ENST00000395761 FDFT1P37268 417 aa16.48■□□□□ 0.23
CXCL1-201ENST00000395761 COILP38432 576 aaPredicted RBP16.48■□□□□ 0.23
CXCL1-201ENST00000395761 KIAA1024LP59773 190 aa16.48■□□□□ 0.23
CXCL1-201ENST00000395761 CDK3Q00526 305 aa16.48■□□□□ 0.23
CXCL1-201ENST00000395761 PTPRCAPQ14761 206 aa16.48■□□□□ 0.23
CXCL1-201ENST00000395761 TRIP13Q15645 432 aaPredicted RBP16.48■□□□□ 0.23
CXCL1-201ENST00000395761 ALG11Q2TAA5 492 aa16.48■□□□□ 0.23
CXCL1-201ENST00000395761 ALS2CLQ60I27 953 aa16.48■□□□□ 0.23
CXCL1-201ENST00000395761 NAXDQ8IW45 347 aa16.48■□□□□ 0.23
CXCL1-201ENST00000395761 SPATA4Q8NEY3 305 aa16.48■□□□□ 0.23
CXCL1-201ENST00000395761 ATL2Q8NHH9 583 aa16.48■□□□□ 0.23
CXCL1-201ENST00000395761 RHBDD1Q8TEB9 315 aa16.48■□□□□ 0.23
CXCL1-201ENST00000395761 WDR92Q96MX6 357 aa16.48■□□□□ 0.23
CXCL1-201ENST00000395761 TRABDQ9H4I3 376 aa16.48■□□□□ 0.23
CXCL1-201ENST00000395761 ARNT2Q9HBZ2 717 aa16.48■□□□□ 0.23
CXCL1-201ENST00000395761 RAB6BQ9NRW1 208 aa16.48■□□□□ 0.23
CXCL1-201ENST00000395761 PIH1D1Q9NWS0 290 aaKnown RBP16.48■□□□□ 0.23
CXCL1-201ENST00000395761 HACD3Q9P035 362 aa16.48■□□□□ 0.23
CXCL1-201ENST00000395761 PAK5Q9P286 719 aa16.48■□□□□ 0.23
CXCL1-201ENST00000395761 KCTD3Q9Y597 815 aa16.48■□□□□ 0.23
CXCL1-201ENST00000395761 FADS2P1A8MWK0 482 aa16.47■□□□□ 0.23
CXCL1-201ENST00000395761 SCAMP1O15126 338 aa16.47■□□□□ 0.23
CXCL1-201ENST00000395761 INPP4BO15327 924 aa16.47■□□□□ 0.23
CXCL1-201ENST00000395761 YKT6O15498 198 aa16.47■□□□□ 0.23
CXCL1-201ENST00000395761 PSMD3O43242 534 aa16.47■□□□□ 0.23
CXCL1-201ENST00000395761 CBFA2T3O75081 653 aa16.47■□□□□ 0.23
CXCL1-201ENST00000395761 PIAS2O75928 621 aa16.47■□□□□ 0.23
CXCL1-201ENST00000395761 KCNK5O95279 499 aa16.47■□□□□ 0.23
CXCL1-201ENST00000395761 MYCLP1P12525 358 aaPredicted RBP16.47■□□□□ 0.23
CXCL1-201ENST00000395761 CSRP1P21291 193 aaKnown RBP16.47■□□□□ 0.23
CXCL1-201ENST00000395761 DGKAP23743 735 aa16.47■□□□□ 0.23
CXCL1-201ENST00000395761 TEAD1P28347 426 aa16.47■□□□□ 0.23
CXCL1-201ENST00000395761 HMGCLP35914 325 aa16.47■□□□□ 0.23
CXCL1-201ENST00000395761 SRP54P61011 504 aaKnown RBP16.47■□□□□ 0.23
CXCL1-201ENST00000395761 PPARDQ03181 441 aa16.47■□□□□ 0.23
CXCL1-201ENST00000395761 HENMT1Q5T8I9 393 aaKnown RBP16.47■□□□□ 0.23
CXCL1-201ENST00000395761 ADAMTSL4Q6UY14 1074 aa16.47■□□□□ 0.23
CXCL1-201ENST00000395761 RD3Q7Z3Z2 195 aa16.47■□□□□ 0.23
CXCL1-201ENST00000395761 GLT6D1Q7Z4J2 308 aa16.47■□□□□ 0.23
CXCL1-201ENST00000395761 TRIM74Q86UV6 250 aa16.47■□□□□ 0.23
CXCL1-201ENST00000395761 HID1Q8IV36 788 aa16.47■□□□□ 0.23
CXCL1-201ENST00000395761 PHACTR4Q8IZ21 702 aa16.47■□□□□ 0.23
CXCL1-201ENST00000395761 CEP112Q8N8E3 955 aa16.47■□□□□ 0.23
CXCL1-201ENST00000395761 MNS1Q8NEH6 495 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms