RNA–Protein interactions for RNA: ENST00000395548.6

AP3S1-202, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 1 (best)

Gene AP3S1, Length 1,180 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-202ENST00000395548 POLD3Q15054 466 aaPredicted RBP5.62□□□□□ -1.51
AP3S1-202ENST00000395548 CNN3Q15417 329 aaKnown RBP5.62□□□□□ -1.51
AP3S1-202ENST00000395548 ZNF77Q15935 545 aa5.62□□□□□ -1.51
AP3S1-202ENST00000395548 ADRM1Q16186 407 aa5.62□□□□□ -1.51
AP3S1-202ENST00000395548 UPP1Q16831 310 aa5.62□□□□□ -1.51
AP3S1-202ENST00000395548 PDCD4Q53EL6 469 aaKnown RBP5.62□□□□□ -1.51
AP3S1-202ENST00000395548 XKR3Q5GH77 459 aa5.62□□□□□ -1.51
AP3S1-202ENST00000395548 FAM102AQ5T9C2 384 aaPredicted RBP5.62□□□□□ -1.51
AP3S1-202ENST00000395548 ZNF572Q7Z3I7 529 aaPredicted RBP5.62□□□□□ -1.51
AP3S1-202ENST00000395548 GALNT5Q7Z7M9 940 aa5.62□□□□□ -1.51
AP3S1-202ENST00000395548 MON1AQ86VX9 555 aa5.62□□□□□ -1.51
AP3S1-202ENST00000395548 ARL14EPQ8N8R7 260 aaPredicted RBP5.62□□□□□ -1.51
AP3S1-202ENST00000395548 CPEB3Q8NE35 698 aaKnown RBP5.62□□□□□ -1.51
AP3S1-202ENST00000395548 TSPEARQ8WU66 669 aa5.62□□□□□ -1.51
AP3S1-202ENST00000395548 RRP36Q96EU6 259 aaKnown RBP5.62□□□□□ -1.51
AP3S1-202ENST00000395548 TMEM41AQ96HV5 264 aa5.62□□□□□ -1.51
AP3S1-202ENST00000395548 CPB2Q96IY4 423 aa5.62□□□□□ -1.51
AP3S1-202ENST00000395548 BARD1Q99728 777 aaKnown RBP5.62□□□□□ -1.51
AP3S1-202ENST00000395548 UBAC1Q9BSL1 405 aa5.62□□□□□ -1.51
AP3S1-202ENST00000395548 SLC29A3Q9BZD2 475 aa5.62□□□□□ -1.51
AP3S1-202ENST00000395548 REXO4Q9GZR2 422 aaKnown RBP5.62□□□□□ -1.51
AP3S1-202ENST00000395548 TMEM206Q9H813 350 aa5.62□□□□□ -1.51
AP3S1-202ENST00000395548 SEC63Q9UGP8 760 aaKnown RBP5.62□□□□□ -1.51
AP3S1-202ENST00000395548 MYH9P35579 1960 aaKnown RBP5.62□□□□□ -1.51
AP3S1-202ENST00000395548 JMJD1CQ15652 2540 aa5.62□□□□□ -1.51
AP3S1-202ENST00000395548 DRGXA6NNA5 263 aa5.61□□□□□ -1.51
AP3S1-202ENST00000395548 CXorf49A8MYA2 514 aaPredicted RBP5.61□□□□□ -1.51
AP3S1-202ENST00000395548 SLC9A3R1O14745 358 aaPredicted RBP5.61□□□□□ -1.51
AP3S1-202ENST00000395548 PLOD3O60568 738 aa5.61□□□□□ -1.51
AP3S1-202ENST00000395548 TIPRLO75663 272 aa5.61□□□□□ -1.51
AP3S1-202ENST00000395548 NUDT3O95989 172 aa5.61□□□□□ -1.51
AP3S1-202ENST00000395548 ACADMP11310 421 aa5.61□□□□□ -1.51
AP3S1-202ENST00000395548 CD27P26842 260 aa5.61□□□□□ -1.51
AP3S1-202ENST00000395548 HTR1BP28222 390 aa5.61□□□□□ -1.51
AP3S1-202ENST00000395548 EPHA8P29322 1005 aaPredicted RBP5.61□□□□□ -1.51
AP3S1-202ENST00000395548 SLC5A3P53794 718 aa5.61□□□□□ -1.51
AP3S1-202ENST00000395548 CLNS1AP54105 237 aaKnown RBP5.61□□□□□ -1.51
AP3S1-202ENST00000395548 NAP1L1P55209 391 aaKnown RBP5.61□□□□□ -1.51
AP3S1-202ENST00000395548 RPL10AP62906 217 aaKnown RBP5.61□□□□□ -1.51
AP3S1-202ENST00000395548 LAMTOR4Q0VGL1 99 aa5.61□□□□□ -1.51
AP3S1-202ENST00000395548 MN1Q10571 1320 aaPredicted RBP5.61□□□□□ -1.51
AP3S1-202ENST00000395548 GPR17Q13304 367 aa5.61□□□□□ -1.51
AP3S1-202ENST00000395548 SP140Q13342 867 aa5.61□□□□□ -1.51
AP3S1-202ENST00000395548 NAB2Q15742 525 aa5.61□□□□□ -1.51
AP3S1-202ENST00000395548 CCNG2Q16589 344 aa5.61□□□□□ -1.51
AP3S1-202ENST00000395548 EIF2S3LQ2VIR3 472 aaKnown RBP5.61□□□□□ -1.51
AP3S1-202ENST00000395548 SDK2Q58EX2 2172 aa5.61□□□□□ -1.51
AP3S1-202ENST00000395548 CENPPQ6IPU0 288 aa5.61□□□□□ -1.51
AP3S1-202ENST00000395548 Q6YL49 198 aa5.61□□□□□ -1.51
AP3S1-202ENST00000395548 RFX8Q6ZV50 586 aa5.61□□□□□ -1.51
AP3S1-202ENST00000395548 DAAM2Q86T65 1068 aa5.61□□□□□ -1.51
AP3S1-202ENST00000395548 PLA2G4DQ86XP0 818 aa5.61□□□□□ -1.51
AP3S1-202ENST00000395548 TRMT2AQ8IZ69 625 aaKnown RBP5.61□□□□□ -1.51
AP3S1-202ENST00000395548 PRR18Q8N4B5 295 aa5.61□□□□□ -1.51
AP3S1-202ENST00000395548 NKAIN3Q8N8D7 197 aa5.61□□□□□ -1.51
AP3S1-202ENST00000395548 RNF149Q8NC42 400 aa5.61□□□□□ -1.51
AP3S1-202ENST00000395548 SLC35B2Q8TB61 432 aa5.61□□□□□ -1.51
AP3S1-202ENST00000395548 PRPF31Q8WWY3 499 aaKnown RBP5.61□□□□□ -1.51
AP3S1-202ENST00000395548 HTR3CQ8WXA8 447 aa5.61□□□□□ -1.51
AP3S1-202ENST00000395548 PRR11Q96HE9 360 aaPredicted RBP5.61□□□□□ -1.51
AP3S1-202ENST00000395548 ZNF577Q9BSK1 485 aa5.61□□□□□ -1.51
AP3S1-202ENST00000395548 TTLL2Q9BWV7 592 aa5.61□□□□□ -1.51
AP3S1-202ENST00000395548 TMEM120AQ9BXJ8 343 aa5.61□□□□□ -1.51
AP3S1-202ENST00000395548 TEX101Q9BY14 249 aa5.61□□□□□ -1.51
AP3S1-202ENST00000395548 LINC00597Q9H2U6 94 aa5.61□□□□□ -1.51
AP3S1-202ENST00000395548 ZDHHC4Q9NPG8 344 aa5.61□□□□□ -1.51
AP3S1-202ENST00000395548 GDF3Q9NR23 364 aa5.61□□□□□ -1.51
AP3S1-202ENST00000395548 NKIRAS2Q9NYR9 191 aa5.61□□□□□ -1.51
AP3S1-202ENST00000395548 MOCS1Q9NZB8 636 aa5.61□□□□□ -1.51
AP3S1-202ENST00000395548 DKK2Q9UBU2 259 aa5.61□□□□□ -1.51
AP3S1-202ENST00000395548 ZNHIT2Q9UHR6 403 aa5.61□□□□□ -1.51
AP3S1-202ENST00000395548 ERRFI1Q9UJM3 462 aaPredicted RBP5.61□□□□□ -1.51
AP3S1-202ENST00000395548 CORO2BQ9UQ03 480 aa5.61□□□□□ -1.51
AP3S1-202ENST00000395548 DCHS2Q6V1P9 2916 aa5.61□□□□□ -1.51
AP3S1-202ENST00000395548 RTTNQ86VV8 2226 aa5.6□□□□□ -1.51
AP3S1-202ENST00000395548 ZFC3H1O60293 1989 aaKnown RBP5.6□□□□□ -1.51
AP3S1-202ENST00000395548 ANK1P16157 1881 aa5.6□□□□□ -1.51
AP3S1-202ENST00000395548 OR6C75A6NL08 312 aa5.6□□□□□ -1.51
AP3S1-202ENST00000395548 BTBD18B2RXH4 712 aa5.6□□□□□ -1.51
AP3S1-202ENST00000395548 INO80B-WBP1J3KQ70 363 aa5.6□□□□□ -1.51
AP3S1-202ENST00000395548 FFAR2O15552 330 aa5.6□□□□□ -1.51
AP3S1-202ENST00000395548 IRAK2O43187 625 aa5.6□□□□□ -1.51
AP3S1-202ENST00000395548 CYTH3O43739 400 aa5.6□□□□□ -1.51
AP3S1-202ENST00000395548 SKAP2O75563 359 aaPredicted RBP5.6□□□□□ -1.51
AP3S1-202ENST00000395548 IGLV3-19P01714 112 aa5.6□□□□□ -1.51
AP3S1-202ENST00000395548 OSMP13725 252 aa5.6□□□□□ -1.51
AP3S1-202ENST00000395548 ALOX15P16050 662 aaPredicted RBP5.6□□□□□ -1.51
AP3S1-202ENST00000395548 XBP1P17861 261 aa5.6□□□□□ -1.51
AP3S1-202ENST00000395548 ARF4P18085 180 aaPredicted RBP5.6□□□□□ -1.51
AP3S1-202ENST00000395548 SLC5A2P31639 672 aa5.6□□□□□ -1.51
AP3S1-202ENST00000395548 SFNP31947 248 aa5.6□□□□□ -1.51
AP3S1-202ENST00000395548 WASP42768 502 aa5.6□□□□□ -1.51
AP3S1-202ENST00000395548 PDE6CP51160 858 aa5.6□□□□□ -1.51
AP3S1-202ENST00000395548 TPMTP51580 245 aa5.6□□□□□ -1.51
AP3S1-202ENST00000395548 AGFG1P52594 562 aaKnown RBP5.6□□□□□ -1.51
AP3S1-202ENST00000395548 ZNF132P52740 706 aa5.6□□□□□ -1.51
AP3S1-202ENST00000395548 CHN2P52757 468 aa5.6□□□□□ -1.51
AP3S1-202ENST00000395548 SRSF2Q01130 221 aaKnown RBP5.6□□□□□ -1.51
AP3S1-202ENST00000395548 KDSRQ06136 332 aa5.6□□□□□ -1.51
AP3S1-202ENST00000395548 TGIF1Q15583 401 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms