RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 NAT6Q93015 286 aa12.63□□□□□ -0.39
GGPS1-203ENST00000391855 TSACCQ96A04 125 aaPredicted RBP12.63□□□□□ -0.39
GGPS1-203ENST00000391855 PDXPQ96GD0 296 aa12.63□□□□□ -0.39
GGPS1-203ENST00000391855 BOCQ9BWV1 1114 aa12.63□□□□□ -0.39
GGPS1-203ENST00000391855 FRMD8Q9BZ67 464 aaPredicted RBP12.63□□□□□ -0.39
GGPS1-203ENST00000391855 GBA3Q9H227 469 aa12.63□□□□□ -0.39
GGPS1-203ENST00000391855 TCEAL2Q9H3H9 227 aaPredicted RBP12.63□□□□□ -0.39
GGPS1-203ENST00000391855 TRABDQ9H4I3 376 aa12.63□□□□□ -0.39
GGPS1-203ENST00000391855 GRPEL1Q9HAV7 217 aa12.63□□□□□ -0.39
GGPS1-203ENST00000391855 ZFYVE1Q9HBF4 777 aa12.63□□□□□ -0.39
GGPS1-203ENST00000391855 FGF22Q9HCT0 170 aa12.63□□□□□ -0.39
GGPS1-203ENST00000391855 GOLGA6AQ9NYA3 693 aa12.63□□□□□ -0.39
GGPS1-203ENST00000391855 HACD3Q9P035 362 aa12.63□□□□□ -0.39
GGPS1-203ENST00000391855 RSPH14Q9UHP6 348 aa12.63□□□□□ -0.39
GGPS1-203ENST00000391855 PNMA8BQ9ULN7 279 aaPredicted RBP12.63□□□□□ -0.39
GGPS1-203ENST00000391855 GUCA1BQ9UMX6 200 aa12.63□□□□□ -0.39
GGPS1-203ENST00000391855 ARID1BQ8NFD5 2236 aaPredicted RBP12.63□□□□□ -0.39
GGPS1-203ENST00000391855 A0A0U1RQJ8 604 aa12.62□□□□□ -0.39
GGPS1-203ENST00000391855 PRSS38A1L453 326 aa12.62□□□□□ -0.39
GGPS1-203ENST00000391855 GOLGA6L3A6NEY3 463 aa12.62□□□□□ -0.39
GGPS1-203ENST00000391855 PMPCBO75439 489 aa12.62□□□□□ -0.39
GGPS1-203ENST00000391855 ANXA9O76027 345 aa12.62□□□□□ -0.39
GGPS1-203ENST00000391855 MT-CYBP00156 380 aaPredicted RBP12.62□□□□□ -0.39
GGPS1-203ENST00000391855 IVLP07476 585 aa12.62□□□□□ -0.39
GGPS1-203ENST00000391855 HLA-DPA1P20036 260 aa12.62□□□□□ -0.39
GGPS1-203ENST00000391855 RBL1P28749 1068 aa12.62□□□□□ -0.39
GGPS1-203ENST00000391855 GEMP55040 296 aa12.62□□□□□ -0.39
GGPS1-203ENST00000391855 WNT3AP56704 352 aa12.62□□□□□ -0.39
GGPS1-203ENST00000391855 DCDC1P59894 354 aa12.62□□□□□ -0.39
GGPS1-203ENST00000391855 C1orf61Q13536 156 aa12.62□□□□□ -0.39
GGPS1-203ENST00000391855 PRPSAP1Q14558 356 aa12.62□□□□□ -0.39
GGPS1-203ENST00000391855 PTPRRQ15256 657 aa12.62□□□□□ -0.39
GGPS1-203ENST00000391855 NR0B2Q15466 257 aa12.62□□□□□ -0.39
GGPS1-203ENST00000391855 DEFB133Q30KQ1 61 aa12.62□□□□□ -0.39
GGPS1-203ENST00000391855 SEL1L2Q5TEA6 688 aa12.62□□□□□ -0.39
GGPS1-203ENST00000391855 PDPK2PQ6A1A2 396 aa12.62□□□□□ -0.39
GGPS1-203ENST00000391855 KDELC1Q6UW63 502 aa12.62□□□□□ -0.39
GGPS1-203ENST00000391855 CCNI2Q6ZMN8 369 aaPredicted RBP12.62□□□□□ -0.39
GGPS1-203ENST00000391855 B4GALNT4Q76KP1 1039 aa12.62□□□□□ -0.39
GGPS1-203ENST00000391855 LYSMD3Q7Z3D4 306 aa12.62□□□□□ -0.39
GGPS1-203ENST00000391855 RD3Q7Z3Z2 195 aa12.62□□□□□ -0.39
GGPS1-203ENST00000391855 ARL10Q8N8L6 244 aa12.62□□□□□ -0.39
GGPS1-203ENST00000391855 OR6C4Q8NGE1 309 aa12.62□□□□□ -0.39
GGPS1-203ENST00000391855 SPATA22Q8NHS9 363 aa12.62□□□□□ -0.39
GGPS1-203ENST00000391855 GATA6Q92908 595 aa12.62□□□□□ -0.39
GGPS1-203ENST00000391855 LRRC45Q96CN5 670 aa12.62□□□□□ -0.39
GGPS1-203ENST00000391855 CNTNAP3BQ96NU0 1288 aa12.62□□□□□ -0.39
GGPS1-203ENST00000391855 HERPUD2Q9BSE4 406 aa12.62□□□□□ -0.39
GGPS1-203ENST00000391855 LGR4Q9BXB1 951 aa12.62□□□□□ -0.39
GGPS1-203ENST00000391855 FRMD8P1Q9BZ68 369 aaPredicted RBP12.62□□□□□ -0.39
GGPS1-203ENST00000391855 CNTNAP3Q9BZ76 1288 aa12.62□□□□□ -0.39
GGPS1-203ENST00000391855 CLPBQ9H078 707 aa12.62□□□□□ -0.39
GGPS1-203ENST00000391855 FAM83DQ9H4H8 585 aa12.62□□□□□ -0.39
GGPS1-203ENST00000391855 TRNAU1APQ9NX07 287 aaKnown RBP12.62□□□□□ -0.39
GGPS1-203ENST00000391855 PACSIN2Q9UNF0 486 aaPredicted RBP12.62□□□□□ -0.39
GGPS1-203ENST00000391855 ZNF711Q9Y462 761 aa12.62□□□□□ -0.39
GGPS1-203ENST00000391855 TDRD6O60522 2096 aaKnown RBP12.62□□□□□ -0.39
GGPS1-203ENST00000391855 LOC285095A0A1B0GVY8 99 aa12.62□□□□□ -0.39
GGPS1-203ENST00000391855 EME2A4GXA9 379 aaPredicted RBP12.62□□□□□ -0.39
GGPS1-203ENST00000391855 YY2O15391 372 aa12.62□□□□□ -0.39
GGPS1-203ENST00000391855 GCATO75600 419 aa12.62□□□□□ -0.39
GGPS1-203ENST00000391855 SOD1P00441 154 aa12.62□□□□□ -0.39
GGPS1-203ENST00000391855 FGF1P05230 155 aa12.62□□□□□ -0.39
GGPS1-203ENST00000391855 PROS1P07225 676 aa12.62□□□□□ -0.39
GGPS1-203ENST00000391855 CCZ1BP86790 482 aa12.62□□□□□ -0.39
GGPS1-203ENST00000391855 CCZ1P86791 482 aaPredicted RBP12.62□□□□□ -0.39
GGPS1-203ENST00000391855 KLF1Q13351 362 aaPredicted RBP12.62□□□□□ -0.39
GGPS1-203ENST00000391855 HENMT1Q5T8I9 393 aaKnown RBP12.62□□□□□ -0.39
GGPS1-203ENST00000391855 DARS2Q6PI48 645 aaKnown RBP12.62□□□□□ -0.39
GGPS1-203ENST00000391855 PELI3Q8N2H9 469 aa12.62□□□□□ -0.39
GGPS1-203ENST00000391855 WDR48Q8TAF3 677 aa12.62□□□□□ -0.39
GGPS1-203ENST00000391855 SCAMP4Q969E2 229 aa12.62□□□□□ -0.39
GGPS1-203ENST00000391855 HIC2Q96JB3 615 aa12.62□□□□□ -0.39
GGPS1-203ENST00000391855 SPATA13Q96N96 652 aa12.62□□□□□ -0.39
GGPS1-203ENST00000391855 SMIM14Q96QK8 99 aa12.62□□□□□ -0.39
GGPS1-203ENST00000391855 RIOK2Q9BVS4 552 aaKnown RBP12.62□□□□□ -0.39
GGPS1-203ENST00000391855 FSD1LQ9BXM9 530 aa12.62□□□□□ -0.39
GGPS1-203ENST00000391855 TMEM121BQ9BXQ6 578 aaPredicted RBP12.62□□□□□ -0.39
GGPS1-203ENST00000391855 GSDMCQ9BYG8 508 aa12.62□□□□□ -0.39
GGPS1-203ENST00000391855 GPR63Q9BZJ6 419 aa12.62□□□□□ -0.39
GGPS1-203ENST00000391855 CARS2Q9HA77 564 aaKnown RBP12.62□□□□□ -0.39
GGPS1-203ENST00000391855 CYP4F12Q9HCS2 524 aa12.62□□□□□ -0.39
GGPS1-203ENST00000391855 VPS18Q9P253 973 aa12.62□□□□□ -0.39
GGPS1-203ENST00000391855 CD84Q9UIB8 345 aa12.62□□□□□ -0.39
GGPS1-203ENST00000391855 MOSPD1Q9UJG1 213 aa12.62□□□□□ -0.39
GGPS1-203ENST00000391855 SLC17A4Q9Y2C5 497 aa12.62□□□□□ -0.39
GGPS1-203ENST00000391855 AAR2Q9Y312 384 aaKnown RBP12.62□□□□□ -0.39
GGPS1-203ENST00000391855 LY6G6EA0A0G2JKS1 128 aa12.61□□□□□ -0.39
GGPS1-203ENST00000391855 KCNN4O15554 427 aa12.61□□□□□ -0.39
GGPS1-203ENST00000391855 CEACAM5P06731 702 aa12.61□□□□□ -0.39
GGPS1-203ENST00000391855 ILF3Q12906 894 aaKnown RBP eCLIP12.61□□□□□ -0.39
GGPS1-203ENST00000391855 ANKRD20A2Q5SQ80 823 aa12.61□□□□□ -0.39
GGPS1-203ENST00000391855 HES3Q5TGS1 186 aa12.61□□□□□ -0.39
GGPS1-203ENST00000391855 ANKRD20A1Q5TYW2 823 aa12.61□□□□□ -0.39
GGPS1-203ENST00000391855 ANKRD20A3Q5VUR7 823 aa12.61□□□□□ -0.39
GGPS1-203ENST00000391855 ZDHHC20Q5W0Z9 365 aa12.61□□□□□ -0.39
GGPS1-203ENST00000391855 TMC3Q7Z5M5 1100 aa12.61□□□□□ -0.39
GGPS1-203ENST00000391855 SLC35F3Q8IY50 421 aa12.61□□□□□ -0.39
GGPS1-203ENST00000391855 TRAM1L1Q8N609 369 aa12.61□□□□□ -0.39
GGPS1-203ENST00000391855 TRIM58Q8NG06 486 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms