RNA–Protein interactions for RNA: ENST00000390466.1

TRAV39-201, Transcript of T cell receptor alpha variable 39, humanhuman

APPRIS P1 BASIC

Gene TRAV39, Length 331 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39-201ENST00000390466 SLC25A23Q9BV35 468 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 MRPL46Q9H2W6 279 aaKnown RBP3.45□□□□□ -1.86
TRAV39-201ENST00000390466 FZD8Q9H461 694 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 TUBB1Q9H4B7 451 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 PRDM12Q9H4Q4 367 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 DUSP21Q9H596 190 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 TDRD3Q9H7E2 651 aaKnown RBP3.45□□□□□ -1.86
TRAV39-201ENST00000390466 DBNDD1Q9H9R9 158 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 CPNE5Q9HCH3 593 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 FBRSL1Q9HCM7 1045 aaKnown RBP3.45□□□□□ -1.86
TRAV39-201ENST00000390466 JPH1Q9HDC5 661 aaPredicted RBP3.45□□□□□ -1.86
TRAV39-201ENST00000390466 LTB4R2Q9NPC1 389 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 NGRNQ9NPE2 291 aaKnown RBP3.45□□□□□ -1.86
TRAV39-201ENST00000390466 PCDH12Q9NPG4 1184 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 SDR39U1Q9NRG7 319 aaPredicted RBP3.45□□□□□ -1.86
TRAV39-201ENST00000390466 HOMER2Q9NSB8 354 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 TREX1Q9NSU2 369 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 INTS10Q9NVR2 710 aaKnown RBP3.45□□□□□ -1.86
TRAV39-201ENST00000390466 POLR3BQ9NW08 1133 aaPredicted RBP3.45□□□□□ -1.86
TRAV39-201ENST00000390466 FBXL12Q9NXK8 326 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 GDAP2Q9NXN4 497 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 GGA3Q9NZ52 723 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 OPTCQ9UBM4 332 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 TMEFF2Q9UIK5 374 aaPredicted RBP3.45□□□□□ -1.86
TRAV39-201ENST00000390466 GJD2Q9UKL4 321 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 TSPAN16Q9UKR8 245 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 VANGL2Q9ULK5 521 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 FZD10Q9ULW2 581 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 ADAMTS5Q9UNA0 930 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 AP4E1Q9UPM8 1137 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 TSC22D4Q9Y3Q8 395 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 UGT2A1Q9Y4X1 527 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 RIPK3Q9Y572 518 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 PCDHGA8Q9Y5G5 932 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 GPR45Q9Y5Y3 372 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 DGKBQ9Y6T7 804 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 VWA8A3KMH1 1905 aa3.44□□□□□ -1.86
TRAV39-201ENST00000390466 DOCK3Q8IZD9 2030 aa3.44□□□□□ -1.86
TRAV39-201ENST00000390466 GOLGB1Q14789 3259 aaKnown RBP3.44□□□□□ -1.86
TRAV39-201ENST00000390466 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP3.44□□□□□ -1.86
TRAV39-201ENST00000390466 A0A0X1KG70 313 aa3.44□□□□□ -1.86
TRAV39-201ENST00000390466 FAM95CA0A1B0GW59 222 aa3.44□□□□□ -1.86
TRAV39-201ENST00000390466 ILVBLA1L0T0 632 aa3.44□□□□□ -1.86
TRAV39-201ENST00000390466 FAM92AA1XBS5 289 aa3.44□□□□□ -1.86
TRAV39-201ENST00000390466 CENPBD1B2RD01 187 aa3.44□□□□□ -1.86
TRAV39-201ENST00000390466 C9JVG2 144 aa3.44□□□□□ -1.86
TRAV39-201ENST00000390466 K7ERI5 159 aa3.44□□□□□ -1.86
TRAV39-201ENST00000390466 UBXN8O00124 270 aa3.44□□□□□ -1.86
TRAV39-201ENST00000390466 PSMD11O00231 422 aa3.44□□□□□ -1.86
TRAV39-201ENST00000390466 EEF2KO00418 725 aaKnown RBP3.44□□□□□ -1.86
TRAV39-201ENST00000390466 ANKRD28O15084 1053 aa3.44□□□□□ -1.86
TRAV39-201ENST00000390466 UBDO15205 165 aa3.44□□□□□ -1.86
TRAV39-201ENST00000390466 SLC16A6O15403 523 aa3.44□□□□□ -1.86
TRAV39-201ENST00000390466 SSX4O60224 188 aa3.44□□□□□ -1.86
TRAV39-201ENST00000390466 KDM1AO60341 852 aa3.44□□□□□ -1.86
TRAV39-201ENST00000390466 KPNA6O60684 536 aa3.44□□□□□ -1.86
TRAV39-201ENST00000390466 USP12O75317 370 aa3.44□□□□□ -1.86
TRAV39-201ENST00000390466 EEDO75530 441 aaKnown RBP3.44□□□□□ -1.86
TRAV39-201ENST00000390466 SEC24DO94855 1032 aaPredicted RBP3.44□□□□□ -1.86
TRAV39-201ENST00000390466 FARP2O94887 1054 aaPredicted RBP3.44□□□□□ -1.86
TRAV39-201ENST00000390466 CDK14O94921 469 aa3.44□□□□□ -1.86
TRAV39-201ENST00000390466 ALX3O95076 343 aa3.44□□□□□ -1.86
TRAV39-201ENST00000390466 PARNO95453 639 aaKnown RBP3.44□□□□□ -1.86
TRAV39-201ENST00000390466 CHRNA1P02708 482 aa3.44□□□□□ -1.86
TRAV39-201ENST00000390466 AHSGP02765 367 aa3.44□□□□□ -1.86
TRAV39-201ENST00000390466 PRKCBP05771 671 aa3.44□□□□□ -1.86
TRAV39-201ENST00000390466 POLBP06746 335 aa3.44□□□□□ -1.86
TRAV39-201ENST00000390466 PSAPP07602 524 aa3.44□□□□□ -1.86
TRAV39-201ENST00000390466 ABCB1P08183 1280 aaPredicted RBP3.44□□□□□ -1.86
TRAV39-201ENST00000390466 CCDC159P0C7I6 412 aa3.44□□□□□ -1.86
TRAV39-201ENST00000390466 CXCL8P10145 99 aa3.44□□□□□ -1.86
TRAV39-201ENST00000390466 THRBP10828 461 aa3.44□□□□□ -1.86
TRAV39-201ENST00000390466 UMPSP11172 480 aa3.44□□□□□ -1.86
TRAV39-201ENST00000390466 MTHFD1P11586 935 aaKnown RBP3.44□□□□□ -1.86
TRAV39-201ENST00000390466 MYCLP12524 364 aaPredicted RBP3.44□□□□□ -1.86
TRAV39-201ENST00000390466 CDH1P12830 882 aa3.44□□□□□ -1.86
TRAV39-201ENST00000390466 HOXD8P13378 290 aaPredicted RBP3.44□□□□□ -1.86
TRAV39-201ENST00000390466 MTHFD2P13995 350 aa3.44□□□□□ -1.86
TRAV39-201ENST00000390466 HNRNPLP14866 589 aaKnown RBP eCLIP3.44□□□□□ -1.86
TRAV39-201ENST00000390466 HOXB9P17482 250 aaPredicted RBP3.44□□□□□ -1.86
TRAV39-201ENST00000390466 JUNDP17535 347 aa3.44□□□□□ -1.86
TRAV39-201ENST00000390466 POLR2EP19388 210 aaKnown RBP3.44□□□□□ -1.86
TRAV39-201ENST00000390466 ENDOUP21128 410 aaKnown RBP3.44□□□□□ -1.86
TRAV39-201ENST00000390466 AGXTP21549 392 aa3.44□□□□□ -1.86
TRAV39-201ENST00000390466 CES1P23141 567 aa3.44□□□□□ -1.86
TRAV39-201ENST00000390466 BDNFP23560 247 aa3.44□□□□□ -1.86
TRAV39-201ENST00000390466 HTR1EP28566 365 aa3.44□□□□□ -1.86
TRAV39-201ENST00000390466 IL12AP29459 219 aa3.44□□□□□ -1.86
TRAV39-201ENST00000390466 CCND2P30279 289 aa3.44□□□□□ -1.86
TRAV39-201ENST00000390466 ATICP31939 592 aa3.44□□□□□ -1.86
TRAV39-201ENST00000390466 CYP2C18P33260 490 aa3.44□□□□□ -1.86
TRAV39-201ENST00000390466 NOS2P35228 1153 aa3.44□□□□□ -1.86
TRAV39-201ENST00000390466 ADRA1AP35348 466 aa3.44□□□□□ -1.86
TRAV39-201ENST00000390466 GGT5P36269 586 aa3.44□□□□□ -1.86
TRAV39-201ENST00000390466 ACADSBP45954 432 aa3.44□□□□□ -1.86
TRAV39-201ENST00000390466 GLRBP48167 497 aa3.44□□□□□ -1.86
TRAV39-201ENST00000390466 KCNC1P48547 511 aa3.44□□□□□ -1.86
TRAV39-201ENST00000390466 TRPC1P48995 793 aa3.44□□□□□ -1.86
TRAV39-201ENST00000390466 RGS7P49802 495 aa3.44□□□□□ -1.86
TRAV39-201ENST00000390466 SLC26A2P50443 739 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms