RNA–Protein interactions for RNA: ENST00000375663.7

VARS-215, Transcript of valyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-215ENST00000375663 ST8SIA6P61647 398 aa16.78■□□□□ 0.28
VARS-215ENST00000375663 TRAP1Q12931 704 aaKnown RBP16.78■□□□□ 0.28
VARS-215ENST00000375663 TMEM214Q6NUQ4 689 aaKnown RBP16.78■□□□□ 0.28
VARS-215ENST00000375663 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.78■□□□□ 0.28
VARS-215ENST00000375663 TSPAN18Q96SJ8 248 aa16.78■□□□□ 0.28
VARS-215ENST00000375663 FTHL17Q9BXU8 183 aa16.78■□□□□ 0.28
VARS-215ENST00000375663 PLK2Q9NYY3 685 aa16.78■□□□□ 0.28
VARS-215ENST00000375663 ADAMTS6Q9UKP5 1117 aa16.78■□□□□ 0.28
VARS-215ENST00000375663 SMIM35A0A1B0GVV1 85 aa16.78■□□□□ 0.28
VARS-215ENST00000375663 UBXN8O00124 270 aa16.78■□□□□ 0.28
VARS-215ENST00000375663 AP5B1Q2VPB7 878 aa16.78■□□□□ 0.28
VARS-215ENST00000375663 CDCA2Q69YH5 1023 aaPredicted RBP16.78■□□□□ 0.28
VARS-215ENST00000375663 B3GNT9Q6UX72 402 aa16.78■□□□□ 0.28
VARS-215ENST00000375663 CXCL17Q6UXB2 119 aa16.78■□□□□ 0.28
VARS-215ENST00000375663 MON1AQ86VX9 555 aa16.78■□□□□ 0.28
VARS-215ENST00000375663 HM13Q8TCT9 377 aa16.78■□□□□ 0.28
VARS-215ENST00000375663 CDK5RAP1Q96SZ6 601 aaKnown RBP16.78■□□□□ 0.28
VARS-215ENST00000375663 MUC13Q9H3R2 512 aa16.78■□□□□ 0.28
VARS-215ENST00000375663 DGKBQ9Y6T7 804 aa16.78■□□□□ 0.28
VARS-215ENST00000375663 PDLIM1O00151 329 aa16.78■□□□□ 0.28
VARS-215ENST00000375663 AHSGP02765 367 aa16.78■□□□□ 0.28
VARS-215ENST00000375663 UMPSP11172 480 aa16.78■□□□□ 0.28
VARS-215ENST00000375663 ZNF37AP17032 561 aaPredicted RBP16.78■□□□□ 0.28
VARS-215ENST00000375663 NCF4Q15080 339 aa16.78■□□□□ 0.28
VARS-215ENST00000375663 SLCO6A1Q86UG4 719 aa16.78■□□□□ 0.28
VARS-215ENST00000375663 ERI1Q8IV48 349 aaKnown RBP16.78■□□□□ 0.28
VARS-215ENST00000375663 OR4K2Q8NGD2 314 aa16.78■□□□□ 0.28
VARS-215ENST00000375663 HBEGFQ99075 208 aa16.78■□□□□ 0.28
VARS-215ENST00000375663 ZBTB26Q9HCK0 441 aa16.78■□□□□ 0.28
VARS-215ENST00000375663 TRNAU1APQ9NX07 287 aaKnown RBP16.78■□□□□ 0.28
VARS-215ENST00000375663 KANSL3Q9P2N6 904 aa16.78■□□□□ 0.28
VARS-215ENST00000375663 EI24O14681 340 aa16.77■□□□□ 0.28
VARS-215ENST00000375663 RPP40O75818 363 aaKnown RBP16.77■□□□□ 0.28
VARS-215ENST00000375663 BCAS2O75934 225 aaPredicted RBP16.77■□□□□ 0.28
VARS-215ENST00000375663 COX7A2P14406 83 aa16.77■□□□□ 0.28
VARS-215ENST00000375663 GM2AP17900 193 aa16.77■□□□□ 0.28
VARS-215ENST00000375663 CYP2A7P20853 494 aa16.77■□□□□ 0.28
VARS-215ENST00000375663 CNTN1Q12860 1018 aa16.77■□□□□ 0.28
VARS-215ENST00000375663 CMPK2Q5EBM0 449 aa16.77■□□□□ 0.28
VARS-215ENST00000375663 KCTD8Q6ZWB6 473 aa16.77■□□□□ 0.28
VARS-215ENST00000375663 FANCEQ9HB96 536 aa16.77■□□□□ 0.28
VARS-215ENST00000375663 KRT84Q9NSB2 600 aa16.77■□□□□ 0.28
VARS-215ENST00000375663 CIDEBQ9UHD4 219 aa16.77■□□□□ 0.28
VARS-215ENST00000375663 CNOT6Q9ULM6 557 aaKnown RBP16.77■□□□□ 0.28
VARS-215ENST00000375663 SAMHD1Q9Y3Z3 626 aaKnown RBP16.77■□□□□ 0.28
VARS-215ENST00000375663 SF3B1O75533 1304 aaKnown RBP eCLIP16.77■□□□□ 0.284e-6■■■■■ 80.4
VARS-215ENST00000375663 CYP4B1P13584 511 aa16.77■□□□□ 0.28
VARS-215ENST00000375663 RHDQ02161 417 aa16.77■□□□□ 0.28
VARS-215ENST00000375663 HSPA14Q0VDF9 509 aa16.77■□□□□ 0.28
VARS-215ENST00000375663 MERTKQ12866 999 aa16.77■□□□□ 0.28
VARS-215ENST00000375663 FBXO27Q8NI29 283 aa16.77■□□□□ 0.28
VARS-215ENST00000375663 GPR22Q99680 433 aa16.77■□□□□ 0.28
VARS-215ENST00000375663 ARMC7Q9H6L4 198 aa16.77■□□□□ 0.28
VARS-215ENST00000375663 TLE6Q9H808 572 aa16.77■□□□□ 0.28
VARS-215ENST00000375663 MKS1Q9NXB0 559 aa16.77■□□□□ 0.28
VARS-215ENST00000375663 KDM4FA0A1W2PPD8 638 aa16.77■□□□□ 0.27
VARS-215ENST00000375663 NPEPPSL1A6NEC2 478 aa16.77■□□□□ 0.27
VARS-215ENST00000375663 ARIH2O95376 493 aa16.77■□□□□ 0.27
VARS-215ENST00000375663 ATP5C1P36542 298 aaKnown RBP16.77■□□□□ 0.27
VARS-215ENST00000375663 CAPGP40121 348 aa16.77■□□□□ 0.27
VARS-215ENST00000375663 ETV4P43268 484 aa16.77■□□□□ 0.27
VARS-215ENST00000375663 BCL2L1Q07817 233 aa16.77■□□□□ 0.27
VARS-215ENST00000375663 INCA1Q0VD86 236 aa16.77■□□□□ 0.27
VARS-215ENST00000375663 ELAVL2Q12926 359 aaKnown RBP16.77■□□□□ 0.27
VARS-215ENST00000375663 CCNYL2Q5T2Q4 361 aa16.77■□□□□ 0.27
VARS-215ENST00000375663 CRYBG2Q8N1P7 616 aa16.77■□□□□ 0.27
VARS-215ENST00000375663 RAB42Q8N4Z0 105 aa16.77■□□□□ 0.27
VARS-215ENST00000375663 MED8Q96G25 268 aa16.77■□□□□ 0.27
VARS-215ENST00000375663 NDEL1Q9GZM8 345 aa16.77■□□□□ 0.27
VARS-215ENST00000375663 E9PAM4 449 aa16.77■□□□□ 0.27
VARS-215ENST00000375663 FAM189A1O60320 539 aa16.77■□□□□ 0.27
VARS-215ENST00000375663 PABPC4LP0CB38 370 aaKnown RBP16.77■□□□□ 0.27
VARS-215ENST00000375663 AKR1A1P14550 325 aa16.77■□□□□ 0.27
VARS-215ENST00000375663 PKMP14618 531 aaKnown RBP16.77■□□□□ 0.27
VARS-215ENST00000375663 ALOX15P16050 662 aaPredicted RBP16.77■□□□□ 0.27
VARS-215ENST00000375663 MRPS6P82932 125 aaKnown RBP16.77■□□□□ 0.27
VARS-215ENST00000375663 IRF8Q02556 426 aa16.77■□□□□ 0.27
VARS-215ENST00000375663 PAGE2BQ5JRK9 111 aa16.77■□□□□ 0.27
VARS-215ENST00000375663 C11orf96Q7Z7L8 435 aa16.77■□□□□ 0.27
VARS-215ENST00000375663 RNF180Q86T96 592 aa16.77■□□□□ 0.27
VARS-215ENST00000375663 GPR180Q86V85 440 aa16.77■□□□□ 0.27
VARS-215ENST00000375663 TTC30BQ8N4P2 665 aa16.77■□□□□ 0.27
VARS-215ENST00000375663 NTAN1Q96AB6 310 aa16.77■□□□□ 0.27
VARS-215ENST00000375663 TMEM169Q96HH4 297 aa16.77■□□□□ 0.27
VARS-215ENST00000375663 GPR21Q99679 349 aa16.77■□□□□ 0.27
VARS-215ENST00000375663 WDR12Q9GZL7 423 aaKnown RBP16.77■□□□□ 0.27
VARS-215ENST00000375663 ANKRD12Q6UB98 2062 aa16.76■□□□□ 0.27
VARS-215ENST00000375663 MYO18AQ92614 2054 aaKnown RBP16.76■□□□□ 0.27
VARS-215ENST00000375663 H3BMM5 538 aa16.76■□□□□ 0.27
VARS-215ENST00000375663 SLC47A1Q96FL8 570 aa16.76■□□□□ 0.27
VARS-215ENST00000375663 REXO5Q96IC2 774 aaKnown RBP16.76■□□□□ 0.27
VARS-215ENST00000375663 CHID1Q9BWS9 393 aa16.76■□□□□ 0.27
VARS-215ENST00000375663 RPS6KA6Q9UK32 745 aa16.76■□□□□ 0.27
VARS-215ENST00000375663 SATB2Q9UPW6 733 aa16.76■□□□□ 0.27
VARS-215ENST00000375663 TDRKHQ9Y2W6 561 aaKnown RBP16.76■□□□□ 0.27
VARS-215ENST00000375663 AQP12BA6NM10 295 aa16.76■□□□□ 0.27
VARS-215ENST00000375663 ASLP04424 464 aa16.76■□□□□ 0.27
VARS-215ENST00000375663 MMP3P08254 477 aa16.76■□□□□ 0.27
VARS-215ENST00000375663 MC4RP32245 332 aa16.76■□□□□ 0.27
VARS-215ENST00000375663 GPC1P35052 558 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms