RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 XRN1Q8IZH2 1706 aaKnown RBP14.7□□□□□ -0.06
NDC1-201ENST00000371429 PRR23D1E9PI22 279 aaPredicted RBP14.7□□□□□ -0.06
NDC1-201ENST00000371429 LRATO95237 230 aa14.7□□□□□ -0.06
NDC1-201ENST00000371429 PRR23D2P0DMB1 279 aaPredicted RBP14.7□□□□□ -0.06
NDC1-201ENST00000371429 CHRNB2P17787 502 aa14.7□□□□□ -0.06
NDC1-201ENST00000371429 CSKP41240 450 aa14.7□□□□□ -0.06
NDC1-201ENST00000371429 LBX1P52954 281 aa14.7□□□□□ -0.06
NDC1-201ENST00000371429 NUP107P57740 925 aa14.7□□□□□ -0.06
NDC1-201ENST00000371429 USP4Q13107 963 aa14.7□□□□□ -0.06
NDC1-201ENST00000371429 NAE1Q13564 534 aa14.7□□□□□ -0.06
NDC1-201ENST00000371429 LPIN1Q14693 890 aa14.7□□□□□ -0.06
NDC1-201ENST00000371429 MACC1Q6ZN28 852 aa14.7□□□□□ -0.06
NDC1-201ENST00000371429 RASGEF1CQ8N431 466 aa14.7□□□□□ -0.06
NDC1-201ENST00000371429 TCAF1Q9Y4C2 921 aa14.7□□□□□ -0.06
NDC1-201ENST00000371429 PIK3R1P27986 724 aa14.7□□□□□ -0.06
NDC1-201ENST00000371429 SYPL2Q5VXT5 272 aa14.7□□□□□ -0.06
NDC1-201ENST00000371429 CHST15Q7LFX5 561 aaPredicted RBP14.7□□□□□ -0.06
NDC1-201ENST00000371429 ZSCAN18Q8TBC5 510 aaPredicted RBP14.7□□□□□ -0.06
NDC1-201ENST00000371429 HMGB4Q8WW32 186 aa14.7□□□□□ -0.06
NDC1-201ENST00000371429 MYLK2Q9H1R3 596 aa14.7□□□□□ -0.06
NDC1-201ENST00000371429 TRIT1Q9H3H1 467 aaKnown RBP14.7□□□□□ -0.06
NDC1-201ENST00000371429 CCSER2Q9H7U1 834 aa14.7□□□□□ -0.06
NDC1-201ENST00000371429 LRRC4CQ9HCJ2 640 aa14.7□□□□□ -0.06
NDC1-201ENST00000371429 ELOVL2Q9NXB9 296 aa14.7□□□□□ -0.06
NDC1-201ENST00000371429 SORCS3Q9UPU3 1222 aa14.7□□□□□ -0.06
NDC1-201ENST00000371429 ANGPT4Q9Y264 503 aa14.7□□□□□ -0.06
NDC1-201ENST00000371429 N6AMT1Q9Y5N5 214 aa14.7□□□□□ -0.06
NDC1-201ENST00000371429 BIRC5O15392 142 aa14.69□□□□□ -0.06
NDC1-201ENST00000371429 STK16O75716 305 aa14.69□□□□□ -0.06
NDC1-201ENST00000371429 ZDHHC13Q8IUH4 622 aa14.69□□□□□ -0.06
NDC1-201ENST00000371429 CELF5Q8N6W0 485 aaKnown RBP14.69□□□□□ -0.06
NDC1-201ENST00000371429 ZNF461Q8TAF7 563 aa14.69□□□□□ -0.06
NDC1-201ENST00000371429 MFSD3Q96ES6 412 aa14.69□□□□□ -0.06
NDC1-201ENST00000371429 SAR1AQ9NR31 198 aa14.69□□□□□ -0.06
NDC1-201ENST00000371429 GTPBP1O00178 669 aaKnown RBP14.69□□□□□ -0.06
NDC1-201ENST00000371429 MYBL2P10244 700 aa14.69□□□□□ -0.06
NDC1-201ENST00000371429 MRPS35P82673 323 aaKnown RBP14.69□□□□□ -0.06
NDC1-201ENST00000371429 ALG11Q2TAA5 492 aa14.69□□□□□ -0.06
NDC1-201ENST00000371429 C10orf107Q8IVU9 208 aa14.69□□□□□ -0.06
NDC1-201ENST00000371429 MREGQ8N565 214 aa14.69□□□□□ -0.06
NDC1-201ENST00000371429 DNAJB14Q8TBM8 379 aa14.69□□□□□ -0.06
NDC1-201ENST00000371429 LCN9Q8WX39 176 aa14.69□□□□□ -0.06
NDC1-201ENST00000371429 CPT1BQ92523 772 aa14.69□□□□□ -0.06
NDC1-201ENST00000371429 NELL1Q92832 810 aa14.69□□□□□ -0.06
NDC1-201ENST00000371429 KLK6Q92876 244 aa14.69□□□□□ -0.06
NDC1-201ENST00000371429 ADI1Q9BV57 179 aa14.69□□□□□ -0.06
NDC1-201ENST00000371429 SDCBP2Q9H190 292 aa14.69□□□□□ -0.06
NDC1-201ENST00000371429 TCRBV7S2A1N4TA0A589 114 aa14.69□□□□□ -0.06
NDC1-201ENST00000371429 TIE1P35590 1138 aa14.69□□□□□ -0.06
NDC1-201ENST00000371429 FEN1P39748 380 aaKnown RBP14.69□□□□□ -0.06
NDC1-201ENST00000371429 DEFA1P59665 94 aa14.69□□□□□ -0.06
NDC1-201ENST00000371429 DEFA3P59666 94 aa14.69□□□□□ -0.06
NDC1-201ENST00000371429 ECT2LQ008S8 904 aa14.69□□□□□ -0.06
NDC1-201ENST00000371429 KCTD19Q17RG1 926 aaPredicted RBP14.69□□□□□ -0.06
NDC1-201ENST00000371429 PCDH19Q8TAB3 1148 aa14.69□□□□□ -0.06
NDC1-201ENST00000371429 POF1BQ8WVV4 589 aa14.69□□□□□ -0.06
NDC1-201ENST00000371429 PPCDCQ96CD2 204 aa14.69□□□□□ -0.06
NDC1-201ENST00000371429 ATG10Q9H0Y0 220 aa14.69□□□□□ -0.06
NDC1-201ENST00000371429 PCDHGA4Q9Y5G9 962 aa14.69□□□□□ -0.06
NDC1-201ENST00000371429 COL1A1P02452 1464 aaPredicted RBP14.69□□□□□ -0.06
NDC1-201ENST00000371429 M0R2N6 131 aa14.69□□□□□ -0.06
NDC1-201ENST00000371429 GNSP15586 552 aa14.69□□□□□ -0.06
NDC1-201ENST00000371429 ALAS2P22557 587 aa14.69□□□□□ -0.06
NDC1-201ENST00000371429 DDX6P26196 483 aaKnown RBP eCLIP14.69□□□□□ -0.06
NDC1-201ENST00000371429 CCR3P51677 355 aa14.69□□□□□ -0.06
NDC1-201ENST00000371429 GPR17Q13304 367 aa14.69□□□□□ -0.06
NDC1-201ENST00000371429 NDUFA9Q16795 377 aa14.69□□□□□ -0.06
NDC1-201ENST00000371429 SLC35G1Q2M3R5 365 aa14.69□□□□□ -0.06
NDC1-201ENST00000371429 LDLRAD1Q5T700 205 aa14.69□□□□□ -0.06
NDC1-201ENST00000371429 CDCA2Q69YH5 1023 aaPredicted RBP14.69□□□□□ -0.06
NDC1-201ENST00000371429 SERPINA9Q86WD7 417 aa14.69□□□□□ -0.06
NDC1-201ENST00000371429 EPB41L4BQ9H329 900 aa14.69□□□□□ -0.06
NDC1-201ENST00000371429 DDX28Q9NUL7 540 aaKnown RBP14.69□□□□□ -0.06
NDC1-201ENST00000371429 TDP1Q9NUW8 608 aa14.69□□□□□ -0.06
NDC1-201ENST00000371429 SCAMP1O15126 338 aa14.68□□□□□ -0.06
NDC1-201ENST00000371429 PMM2O15305 246 aa14.68□□□□□ -0.06
NDC1-201ENST00000371429 ERN1O75460 977 aaKnown RBP14.68□□□□□ -0.06
NDC1-201ENST00000371429 EPHA3P29320 983 aa14.68□□□□□ -0.06
NDC1-201ENST00000371429 BLKP51451 505 aa14.68□□□□□ -0.06
NDC1-201ENST00000371429 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.68□□□□□ -0.06
NDC1-201ENST00000371429 ANGPT1Q15389 498 aa14.68□□□□□ -0.06
NDC1-201ENST00000371429 PDK4Q16654 411 aa14.68□□□□□ -0.06
NDC1-201ENST00000371429 SNX30Q5VWJ9 437 aa14.68□□□□□ -0.06
NDC1-201ENST00000371429 MBLAC2Q68D91 279 aa14.68□□□□□ -0.06
NDC1-201ENST00000371429 ZNF549Q6P9A3 640 aa14.68□□□□□ -0.06
NDC1-201ENST00000371429 NRSN1Q8IZ57 195 aa14.68□□□□□ -0.06
NDC1-201ENST00000371429 EMID1Q96A84 441 aaPredicted RBP14.68□□□□□ -0.06
NDC1-201ENST00000371429 TMEM79Q9BSE2 394 aa14.68□□□□□ -0.06
NDC1-201ENST00000371429 RIBC2Q9H4K1 309 aa14.68□□□□□ -0.06
NDC1-201ENST00000371429 BATF3Q9NR55 127 aa14.68□□□□□ -0.06
NDC1-201ENST00000371429 VPS4AQ9UN37 437 aa14.68□□□□□ -0.06
NDC1-201ENST00000371429 CORO2BQ9UQ03 480 aa14.68□□□□□ -0.06
NDC1-201ENST00000371429 AP4S1Q9Y587 144 aa14.68□□□□□ -0.06
NDC1-201ENST00000371429 GOLGA4Q13439 2230 aaKnown RBP14.68□□□□□ -0.06
NDC1-201ENST00000371429 IQCF5A8MTL0 148 aa14.68□□□□□ -0.06
NDC1-201ENST00000371429 RPIAP49247 311 aa14.68□□□□□ -0.06
NDC1-201ENST00000371429 STX4Q12846 297 aa14.68□□□□□ -0.06
NDC1-201ENST00000371429 ATP13A5Q4VNC0 1218 aa14.68□□□□□ -0.06
NDC1-201ENST00000371429 CARD16Q5EG05 197 aa14.68□□□□□ -0.06
NDC1-201ENST00000371429 TMEM220Q6QAJ8 160 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms