RNA–Protein interactions for RNA: ENST00000366481.3

TRIM58-201, Transcript of tripartite motif containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM58, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58-201ENST00000366481 CCM2LQ9NUG4 571 aaPredicted RBP19.62■□□□□ 0.73
TRIM58-201ENST00000366481 RIC8BQ9NVN3 520 aa19.62■□□□□ 0.73
TRIM58-201ENST00000366481 GIMAP2Q9UG22 337 aa19.62■□□□□ 0.73
TRIM58-201ENST00000366481 SLC30A1Q9Y6M5 507 aa19.62■□□□□ 0.73
TRIM58-201ENST00000366481 HTTP42858 3142 aa19.62■□□□□ 0.73
TRIM58-201ENST00000366481 RSL1D1O76021 490 aaKnown RBP19.62■□□□□ 0.73
TRIM58-201ENST00000366481 SUPT7LO94864 414 aa19.62■□□□□ 0.73
TRIM58-201ENST00000366481 POMCP01189 267 aa19.62■□□□□ 0.73
TRIM58-201ENST00000366481 IDUAP35475 653 aa19.62■□□□□ 0.73
TRIM58-201ENST00000366481 BRCC3P46736 316 aa19.62■□□□□ 0.73
TRIM58-201ENST00000366481 GSSP48637 474 aa19.62■□□□□ 0.73
TRIM58-201ENST00000366481 TMTC4Q5T4D3 741 aa19.62■□□□□ 0.73
TRIM58-201ENST00000366481 BROXQ5VW32 411 aa19.62■□□□□ 0.73
TRIM58-201ENST00000366481 ZNF470Q6ECI4 717 aa19.62■□□□□ 0.73
TRIM58-201ENST00000366481 RYBPQ8N488 228 aaPredicted RBP19.62■□□□□ 0.73
TRIM58-201ENST00000366481 TXNDC5Q8NBS9 432 aaKnown RBP19.62■□□□□ 0.73
TRIM58-201ENST00000366481 ABHD11Q8NFV4 315 aa19.62■□□□□ 0.73
TRIM58-201ENST00000366481 SNX19Q92543 992 aa19.62■□□□□ 0.73
TRIM58-201ENST00000366481 TNFRSF12AQ9NP84 129 aa19.62■□□□□ 0.73
TRIM58-201ENST00000366481 COL1A2P08123 1366 aa19.62■□□□□ 0.73
TRIM58-201ENST00000366481 A0A0G2JMZ2 1700 aa19.61■□□□□ 0.73
TRIM58-201ENST00000366481 LRRC37A2A6NM11 1700 aa19.61■□□□□ 0.73
TRIM58-201ENST00000366481 INHBBP09529 407 aa19.61■□□□□ 0.73
TRIM58-201ENST00000366481 POLR2IP36954 125 aaKnown RBP19.61■□□□□ 0.73
TRIM58-201ENST00000366481 MLLT10P55197 1068 aa19.61■□□□□ 0.73
TRIM58-201ENST00000366481 TSPY1Q01534 308 aa19.61■□□□□ 0.73
TRIM58-201ENST00000366481 ZNF846Q147U1 533 aa19.61■□□□□ 0.73
TRIM58-201ENST00000366481 PAGE2BQ5JRK9 111 aa19.61■□□□□ 0.73
TRIM58-201ENST00000366481 CCNYL2Q5T2Q4 361 aa19.61■□□□□ 0.73
TRIM58-201ENST00000366481 RBM20Q5T481 1227 aaKnown RBP19.61■□□□□ 0.73
TRIM58-201ENST00000366481 SDHAF4Q5VUM1 108 aa19.61■□□□□ 0.73
TRIM58-201ENST00000366481 KCTD11Q693B1 232 aa19.61■□□□□ 0.73
TRIM58-201ENST00000366481 PDZD4Q76G19 769 aaPredicted RBP19.61■□□□□ 0.73
TRIM58-201ENST00000366481 STYXQ8WUJ0 223 aa19.61■□□□□ 0.73
TRIM58-201ENST00000366481 SLC45A3Q96JT2 553 aa19.61■□□□□ 0.73
TRIM58-201ENST00000366481 TEKT5Q96M29 485 aa19.61■□□□□ 0.73
TRIM58-201ENST00000366481 RNF145Q96MT1 663 aa19.61■□□□□ 0.73
TRIM58-201ENST00000366481 SLC2A13Q96QE2 648 aa19.61■□□□□ 0.73
TRIM58-201ENST00000366481 OLFM1Q99784 485 aa19.61■□□□□ 0.73
TRIM58-201ENST00000366481 RCOR3Q9P2K3 495 aaPredicted RBP19.61■□□□□ 0.73
TRIM58-201ENST00000366481 TMEM98Q9Y2Y6 226 aa19.61■□□□□ 0.73
TRIM58-201ENST00000366481 IQCA1LA6NCM1 817 aa19.61■□□□□ 0.73
TRIM58-201ENST00000366481 M0R3G1 203 aa19.61■□□□□ 0.73
TRIM58-201ENST00000366481 PSMD11O00231 422 aa19.61■□□□□ 0.73
TRIM58-201ENST00000366481 XYLBO75191 536 aa19.61■□□□□ 0.73
TRIM58-201ENST00000366481 KCNA5P22460 613 aa19.61■□□□□ 0.73
TRIM58-201ENST00000366481 RNF19BQ6ZMZ0 732 aa19.61■□□□□ 0.73
TRIM58-201ENST00000366481 TMEM151AQ8N4L1 468 aa19.61■□□□□ 0.73
TRIM58-201ENST00000366481 NSMCE3Q96MG7 304 aa19.61■□□□□ 0.73
TRIM58-201ENST00000366481 LHPPQ9H008 270 aa19.61■□□□□ 0.73
TRIM58-201ENST00000366481 PALMDQ9NP74 551 aa19.61■□□□□ 0.73
TRIM58-201ENST00000366481 PCNAP12004 261 aa19.61■□□□□ 0.73
TRIM58-201ENST00000366481 HPCAL1P37235 193 aa19.61■□□□□ 0.73
TRIM58-201ENST00000366481 PRKAA2P54646 552 aa19.61■□□□□ 0.73
TRIM58-201ENST00000366481 TAS2R39P59534 338 aa19.61■□□□□ 0.73
TRIM58-201ENST00000366481 ITKQ08881 620 aa19.61■□□□□ 0.73
TRIM58-201ENST00000366481 FBXO48Q5FWF7 155 aa19.61■□□□□ 0.73
TRIM58-201ENST00000366481 PIWIL4Q7Z3Z4 852 aaKnown RBP19.61■□□□□ 0.73
TRIM58-201ENST00000366481 TLK2Q86UE8 772 aa19.61■□□□□ 0.73
TRIM58-201ENST00000366481 SLCO6A1Q86UG4 719 aa19.61■□□□□ 0.73
TRIM58-201ENST00000366481 CUZD1Q86UP6 607 aa19.61■□□□□ 0.73
TRIM58-201ENST00000366481 MFSD2AQ8NA29 543 aa19.61■□□□□ 0.73
TRIM58-201ENST00000366481 RAB2BQ8WUD1 216 aa19.61■□□□□ 0.73
TRIM58-201ENST00000366481 SPC25Q9HBM1 224 aa19.61■□□□□ 0.73
TRIM58-201ENST00000366481 EML4Q9HC35 981 aaKnown RBP19.61■□□□□ 0.73
TRIM58-201ENST00000366481 DSEQ9UL01 958 aa19.61■□□□□ 0.73
TRIM58-201ENST00000366481 ANKRD6Q9Y2G4 727 aa19.61■□□□□ 0.73
TRIM58-201ENST00000366481 TCAF1Q9Y4C2 921 aa19.61■□□□□ 0.73
TRIM58-201ENST00000366481 FAM95CA0A1B0GW59 222 aa19.6■□□□□ 0.73
TRIM58-201ENST00000366481 LDLRP01130 860 aa19.6■□□□□ 0.73
TRIM58-201ENST00000366481 RPL34P49207 117 aaKnown RBP19.6■□□□□ 0.73
TRIM58-201ENST00000366481 FRG1Q14331 258 aaKnown RBP19.6■□□□□ 0.73
TRIM58-201ENST00000366481 HABP4Q5JVS0 413 aaKnown RBP19.6■□□□□ 0.73
TRIM58-201ENST00000366481 BRI3BPQ8WY22 251 aa19.6■□□□□ 0.73
TRIM58-201ENST00000366481 ABHD16BQ9H3Z7 469 aa19.6■□□□□ 0.73
TRIM58-201ENST00000366481 A0A0J9YYE9 177 aa19.6■□□□□ 0.73
TRIM58-201ENST00000366481 NME4O00746 187 aa19.6■□□□□ 0.73
TRIM58-201ENST00000366481 DLGAP1O14490 977 aa19.6■□□□□ 0.73
TRIM58-201ENST00000366481 TOMM70O94826 608 aa19.6■□□□□ 0.73
TRIM58-201ENST00000366481 KRT75O95678 551 aa19.6■□□□□ 0.73
TRIM58-201ENST00000366481 PNPLA4P41247 253 aa19.6■□□□□ 0.73
TRIM58-201ENST00000366481 CDH17Q12864 832 aa19.6■□□□□ 0.73
TRIM58-201ENST00000366481 SF3B4Q15427 424 aaKnown RBP eCLIP19.6■□□□□ 0.733e-6■■□□□ 13.4
TRIM58-201ENST00000366481 ARL13BQ3SXY8 428 aa19.6■□□□□ 0.73
TRIM58-201ENST00000366481 INTS11Q5TA45 600 aaKnown RBP19.6■□□□□ 0.73
TRIM58-201ENST00000366481 TFAP2DQ7Z6R9 452 aa19.6■□□□□ 0.73
TRIM58-201ENST00000366481 PACRGLQ8N7B6 248 aa19.6■□□□□ 0.73
TRIM58-201ENST00000366481 HTRA1Q92743 480 aa19.6■□□□□ 0.73
TRIM58-201ENST00000366481 ALPK1Q96QP1 1244 aa19.6■□□□□ 0.73
TRIM58-201ENST00000366481 TPK1Q9H3S4 243 aa19.6■□□□□ 0.73
TRIM58-201ENST00000366481 NANOGQ9H9S0 305 aa19.6■□□□□ 0.73
TRIM58-201ENST00000366481 TMEM9Q9P0T7 183 aa19.6■□□□□ 0.73
TRIM58-201ENST00000366481 TMEM181Q9P2C4 612 aa19.6■□□□□ 0.73
TRIM58-201ENST00000366481 CELF2O95319 508 aaKnown RBP19.59■□□□□ 0.73
TRIM58-201ENST00000366481 MAGP20916 626 aa19.59■□□□□ 0.73
TRIM58-201ENST00000366481 SERPINB1P30740 379 aa19.59■□□□□ 0.73
TRIM58-201ENST00000366481 CBLBQ13191 982 aa19.59■□□□□ 0.73
TRIM58-201ENST00000366481 DEPDC1Q5TB30 811 aa19.59■□□□□ 0.73
TRIM58-201ENST00000366481 IQSEC1Q6DN90 963 aa19.59■□□□□ 0.73
TRIM58-201ENST00000366481 Q8N9G6 341 aaPredicted RBP19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms