RNA–Protein interactions for RNA: ENST00000365563.1

RNU6-54P-201, Transcript of RNA, U6 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU6-54P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-54P-201ENST00000365563 PIGTQ969N2 578 aa0.03□□□□□ -2.4
RNU6-54P-201ENST00000365563 PRAC1Q96KF2 57 aa0.03□□□□□ -2.4
RNU6-54P-201ENST00000365563 PRICKLE1Q96MT3 831 aaPredicted RBP0.03□□□□□ -2.4
RNU6-54P-201ENST00000365563 QRFPRQ96P65 431 aa0.03□□□□□ -2.4
RNU6-54P-201ENST00000365563 PSD2Q9BQI7 771 aa0.03□□□□□ -2.4
RNU6-54P-201ENST00000365563 RTP3Q9BQQ7 232 aa0.03□□□□□ -2.4
RNU6-54P-201ENST00000365563 ZNF670Q9BS34 389 aa0.03□□□□□ -2.4
RNU6-54P-201ENST00000365563 LMF2Q9BU23 707 aaKnown RBP0.03□□□□□ -2.4
RNU6-54P-201ENST00000365563 HEXA-AS1Q9H8Q6 139 aa0.03□□□□□ -2.4
RNU6-54P-201ENST00000365563 ZMAT3Q9HA38 289 aaKnown RBP0.03□□□□□ -2.4
RNU6-54P-201ENST00000365563 GNB4Q9HAV0 340 aa0.03□□□□□ -2.4
RNU6-54P-201ENST00000365563 WDR6Q9NNW5 1121 aaKnown RBP0.03□□□□□ -2.4
RNU6-54P-201ENST00000365563 NMRK2Q9NPI5 230 aa0.03□□□□□ -2.4
RNU6-54P-201ENST00000365563 CNGB3Q9NQW8 809 aa0.03□□□□□ -2.4
RNU6-54P-201ENST00000365563 GRHL1Q9NZI5 618 aa0.03□□□□□ -2.4
RNU6-54P-201ENST00000365563 ZNF319Q9P2F9 582 aa0.03□□□□□ -2.4
RNU6-54P-201ENST00000365563 ACSL5Q9ULC5 683 aa0.03□□□□□ -2.4
RNU6-54P-201ENST00000365563 RAB26Q9ULW5 256 aa0.03□□□□□ -2.4
RNU6-54P-201ENST00000365563 COL1A2P08123 1366 aa0.03□□□□□ -2.4
RNU6-54P-201ENST00000365563 HCFC1P51610 2035 aa0.03□□□□□ -2.41
RNU6-54P-201ENST00000365563 ARID1AO14497 2285 aa0.02□□□□□ -2.41
RNU6-54P-201ENST00000365563 A0A087WWV3 80 aa0.02□□□□□ -2.41
RNU6-54P-201ENST00000365563 A0A087WZ62 844 aa0.02□□□□□ -2.41
RNU6-54P-201ENST00000365563 ZNF840PA6NDX5 716 aa0.02□□□□□ -2.41
RNU6-54P-201ENST00000365563 OR2W5A6NFC9 320 aa0.02□□□□□ -2.41
RNU6-54P-201ENST00000365563 H0YIN7 160 aa0.02□□□□□ -2.41
RNU6-54P-201ENST00000365563 PLOD2O00469 737 aa0.02□□□□□ -2.41
RNU6-54P-201ENST00000365563 KLF11O14901 512 aa0.02□□□□□ -2.41
RNU6-54P-201ENST00000365563 PRPF3O43395 683 aaKnown RBP0.02□□□□□ -2.41
RNU6-54P-201ENST00000365563 THAP12O43422 761 aa0.02□□□□□ -2.41
RNU6-54P-201ENST00000365563 CDC123O75794 336 aaPredicted RBP0.02□□□□□ -2.41
RNU6-54P-201ENST00000365563 IL1AP01583 271 aa0.02□□□□□ -2.41
RNU6-54P-201ENST00000365563 IGLV3-19P01714 112 aa0.02□□□□□ -2.41
RNU6-54P-201ENST00000365563 THY1P04216 161 aa0.02□□□□□ -2.41
RNU6-54P-201ENST00000365563 ELK1P19419 428 aa0.02□□□□□ -2.41
RNU6-54P-201ENST00000365563 CNGA1P29973 690 aa0.02□□□□□ -2.41
RNU6-54P-201ENST00000365563 CORO1AP31146 461 aaKnown RBP0.02□□□□□ -2.41
RNU6-54P-201ENST00000365563 MMP12P39900 470 aa0.02□□□□□ -2.41
RNU6-54P-201ENST00000365563 PTGDSP41222 190 aa0.02□□□□□ -2.41
RNU6-54P-201ENST00000365563 PIK3CBP42338 1070 aa0.02□□□□□ -2.41
RNU6-54P-201ENST00000365563 RECQLP46063 649 aaPredicted RBP0.02□□□□□ -2.41
RNU6-54P-201ENST00000365563 RAD23BP54727 409 aa0.02□□□□□ -2.41
RNU6-54P-201ENST00000365563 WNT4P56705 351 aa0.02□□□□□ -2.41
RNU6-54P-201ENST00000365563 FOXL2P58012 376 aa0.02□□□□□ -2.41
RNU6-54P-201ENST00000365563 TAS2R38P59533 333 aa0.02□□□□□ -2.41
RNU6-54P-201ENST00000365563 RPL15P61313 204 aaKnown RBP0.02□□□□□ -2.41
RNU6-54P-201ENST00000365563 ISL1P61371 349 aa0.02□□□□□ -2.41
RNU6-54P-201ENST00000365563 CYCSP99999 105 aaKnown RBP0.02□□□□□ -2.41
RNU6-54P-201ENST00000365563 MECOMQ03112 1051 aa0.02□□□□□ -2.41
RNU6-54P-201ENST00000365563 ACVR2BQ13705 512 aa0.02□□□□□ -2.41
RNU6-54P-201ENST00000365563 LY6DQ14210 128 aa0.02□□□□□ -2.41
RNU6-54P-201ENST00000365563 TTF1Q15361 905 aaPredicted RBP0.02□□□□□ -2.41
RNU6-54P-201ENST00000365563 PTPN21Q16825 1174 aa0.02□□□□□ -2.41
RNU6-54P-201ENST00000365563 WSCD2Q2TBF2 565 aa0.02□□□□□ -2.41
RNU6-54P-201ENST00000365563 MOGAT2Q3SYC2 334 aa0.02□□□□□ -2.41
RNU6-54P-201ENST00000365563 C3orf38Q5JPI3 329 aa0.02□□□□□ -2.41
RNU6-54P-201ENST00000365563 SPDYCQ5MJ68 293 aa0.02□□□□□ -2.41
RNU6-54P-201ENST00000365563 ATAD3CQ5T2N8 411 aa0.02□□□□□ -2.41
RNU6-54P-201ENST00000365563 MSANTD2Q6P1R3 559 aa0.02□□□□□ -2.41
RNU6-54P-201ENST00000365563 Q6P435 159 aa0.02□□□□□ -2.41
RNU6-54P-201ENST00000365563 ANO5Q75V66 913 aa0.02□□□□□ -2.41
RNU6-54P-201ENST00000365563 RNF44Q7L0R7 432 aa0.02□□□□□ -2.41
RNU6-54P-201ENST00000365563 MON1AQ86VX9 555 aa0.02□□□□□ -2.41
RNU6-54P-201ENST00000365563 CHERPQ8IWX8 916 aaKnown RBP0.02□□□□□ -2.41
RNU6-54P-201ENST00000365563 ZC3H3Q8IXZ2 948 aaKnown RBP0.02□□□□□ -2.41
RNU6-54P-201ENST00000365563 HACE1Q8IYU2 909 aa0.02□□□□□ -2.41
RNU6-54P-201ENST00000365563 RNF175Q8N4F7 328 aa0.02□□□□□ -2.41
RNU6-54P-201ENST00000365563 NGEFQ8N5V2 710 aa0.02□□□□□ -2.41
RNU6-54P-201ENST00000365563 SCAIQ8N9R8 606 aa0.02□□□□□ -2.41
RNU6-54P-201ENST00000365563 CCDC150Q8NCX0 1101 aa0.02□□□□□ -2.41
RNU6-54P-201ENST00000365563 RDM1Q8NG50 284 aa0.02□□□□□ -2.41
RNU6-54P-201ENST00000365563 EXD1Q8NHP7 514 aa0.02□□□□□ -2.41
RNU6-54P-201ENST00000365563 NPRL2Q8WTW4 380 aa0.02□□□□□ -2.41
RNU6-54P-201ENST00000365563 ZFAND2BQ8WV99 257 aa0.02□□□□□ -2.41
RNU6-54P-201ENST00000365563 TMEM143Q96AN5 459 aa0.02□□□□□ -2.41
RNU6-54P-201ENST00000365563 PDLIM5Q96HC4 596 aaKnown RBP0.02□□□□□ -2.41
RNU6-54P-201ENST00000365563 ZNF582Q96NG8 517 aaPredicted RBP0.02□□□□□ -2.41
RNU6-54P-201ENST00000365563 DNAJC2Q99543 621 aaKnown RBP0.02□□□□□ -2.41
RNU6-54P-201ENST00000365563 MTERF1Q99551 399 aaKnown RBP0.02□□□□□ -2.41
RNU6-54P-201ENST00000365563 NPAS1Q99742 590 aa0.02□□□□□ -2.41
RNU6-54P-201ENST00000365563 CLSTN3Q9BQT9 956 aa0.02□□□□□ -2.41
RNU6-54P-201ENST00000365563 RHNO1Q9BSD3 238 aa0.02□□□□□ -2.41
RNU6-54P-201ENST00000365563 FUCA2Q9BTY2 467 aa0.02□□□□□ -2.41
RNU6-54P-201ENST00000365563 KATNAL1Q9BW62 490 aa0.02□□□□□ -2.41
RNU6-54P-201ENST00000365563 TRIM31Q9BZY9 425 aa0.02□□□□□ -2.41
RNU6-54P-201ENST00000365563 SLKQ9H2G2 1235 aaPredicted RBP0.02□□□□□ -2.41
RNU6-54P-201ENST00000365563 NOD2Q9HC29 1040 aa0.02□□□□□ -2.41
RNU6-54P-201ENST00000365563 FSCN3Q9NQT6 498 aa0.02□□□□□ -2.41
RNU6-54P-201ENST00000365563 TBC1D23Q9NUY8 699 aa0.02□□□□□ -2.41
RNU6-54P-201ENST00000365563 STK32BQ9NY57 414 aa0.02□□□□□ -2.41
RNU6-54P-201ENST00000365563 SLC5A4Q9NY91 659 aa0.02□□□□□ -2.41
RNU6-54P-201ENST00000365563 MARCH4Q9P2E8 410 aaPredicted RBP0.02□□□□□ -2.41
RNU6-54P-201ENST00000365563 IFT80Q9P2H3 777 aaPredicted RBP0.02□□□□□ -2.41
RNU6-54P-201ENST00000365563 RPS6KB2Q9UBS0 482 aa0.02□□□□□ -2.41
RNU6-54P-201ENST00000365563 OGDHLQ9ULD0 1010 aa0.02□□□□□ -2.41
RNU6-54P-201ENST00000365563 GRID1Q9ULK0 1009 aa0.02□□□□□ -2.41
RNU6-54P-201ENST00000365563 SLC12A4Q9UP95 1085 aa0.02□□□□□ -2.41
RNU6-54P-201ENST00000365563 DNAJC16Q9Y2G8 782 aa0.02□□□□□ -2.41
RNU6-54P-201ENST00000365563 ZNF510Q9Y2H8 683 aa0.02□□□□□ -2.41
RNU6-54P-201ENST00000365563 KLHL20Q9Y2M5 609 aa0.02□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms