RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 DNAL1Q4LDG9 190 aa7.38□□□□□ -1.23
CLCN3-202ENST00000360642 ANKRD20A4Q4UJ75 823 aa7.38□□□□□ -1.23
CLCN3-202ENST00000360642 PITRM1Q5JRX3 1037 aa7.38□□□□□ -1.23
CLCN3-202ENST00000360642 SNX30Q5VWJ9 437 aa7.38□□□□□ -1.23
CLCN3-202ENST00000360642 PM20D1Q6GTS8 502 aa7.38□□□□□ -1.23
CLCN3-202ENST00000360642 ANO7Q6IWH7 933 aa7.38□□□□□ -1.23
CLCN3-202ENST00000360642 PLD6Q8N2A8 252 aaKnown RBP7.38□□□□□ -1.23
CLCN3-202ENST00000360642 PPP1R14CQ8TAE6 165 aa7.38□□□□□ -1.23
CLCN3-202ENST00000360642 DNAJC9Q8WXX5 260 aa7.38□□□□□ -1.23
CLCN3-202ENST00000360642 RILPQ96NA2 401 aa7.38□□□□□ -1.23
CLCN3-202ENST00000360642 AGAP3Q96P47 875 aa7.38□□□□□ -1.23
CLCN3-202ENST00000360642 AGAP2Q99490 1192 aa7.38□□□□□ -1.23
CLCN3-202ENST00000360642 KATNAL1Q9BW62 490 aa7.38□□□□□ -1.23
CLCN3-202ENST00000360642 RNF38Q9H0F5 515 aa7.38□□□□□ -1.23
CLCN3-202ENST00000360642 NMRK1Q9NWW6 199 aa7.38□□□□□ -1.23
CLCN3-202ENST00000360642 LZTS1Q9Y250 596 aa7.38□□□□□ -1.23
CLCN3-202ENST00000360642 SPO11Q9Y5K1 396 aa7.38□□□□□ -1.23
CLCN3-202ENST00000360642 TMEM82A0PJX8 343 aa7.37□□□□□ -1.23
CLCN3-202ENST00000360642 G3V2L1 256 aa7.37□□□□□ -1.23
CLCN3-202ENST00000360642 CACNG3O60359 315 aa7.37□□□□□ -1.23
CLCN3-202ENST00000360642 USP12O75317 370 aa7.37□□□□□ -1.23
CLCN3-202ENST00000360642 F9P00740 461 aa7.37□□□□□ -1.23
CLCN3-202ENST00000360642 PAMP19021 973 aa7.37□□□□□ -1.23
CLCN3-202ENST00000360642 BDNFP23560 247 aa7.37□□□□□ -1.23
CLCN3-202ENST00000360642 SPRP35270 261 aaPredicted RBP7.37□□□□□ -1.23
CLCN3-202ENST00000360642 GMPRP36959 345 aa7.37□□□□□ -1.23
CLCN3-202ENST00000360642 SERPINB8P50452 374 aa7.37□□□□□ -1.23
CLCN3-202ENST00000360642 ABCE1P61221 599 aaKnown RBP7.37□□□□□ -1.23
CLCN3-202ENST00000360642 THOC5Q13769 683 aaKnown RBP7.37□□□□□ -1.23
CLCN3-202ENST00000360642 ARL13BQ3SXY8 428 aa7.37□□□□□ -1.23
CLCN3-202ENST00000360642 CTU1Q7Z7A3 348 aaKnown RBP7.37□□□□□ -1.23
CLCN3-202ENST00000360642 CMC1Q7Z7K0 106 aa7.37□□□□□ -1.23
CLCN3-202ENST00000360642 ULK2Q8IYT8 1036 aa7.37□□□□□ -1.23
CLCN3-202ENST00000360642 FAM136AQ96C01 138 aa7.37□□□□□ -1.23
CLCN3-202ENST00000360642 PANX3Q96QZ0 392 aa7.37□□□□□ -1.23
CLCN3-202ENST00000360642 VAT1Q99536 393 aa7.37□□□□□ -1.23
CLCN3-202ENST00000360642 DUSP15Q9H1R2 295 aaPredicted RBP7.37□□□□□ -1.23
CLCN3-202ENST00000360642 PNPOQ9NVS9 261 aa7.37□□□□□ -1.23
CLCN3-202ENST00000360642 DDIT4Q9NX09 232 aa7.37□□□□□ -1.23
CLCN3-202ENST00000360642 BFARQ9NZS9 450 aa7.37□□□□□ -1.23
CLCN3-202ENST00000360642 TXNDC16Q9P2K2 825 aa7.37□□□□□ -1.23
CLCN3-202ENST00000360642 ZNF212Q9UDV6 495 aa7.37□□□□□ -1.23
CLCN3-202ENST00000360642 CDH9Q9ULB4 789 aa7.37□□□□□ -1.23
CLCN3-202ENST00000360642 KLHL2O95198 593 aa7.37□□□□□ -1.23
CLCN3-202ENST00000360642 FUCA1P04066 466 aa7.37□□□□□ -1.23
CLCN3-202ENST00000360642 MPOP05164 745 aa7.37□□□□□ -1.23
CLCN3-202ENST00000360642 THP07101 528 aa7.37□□□□□ -1.23
CLCN3-202ENST00000360642 CELA2BP08218 269 aaPredicted RBP7.37□□□□□ -1.23
CLCN3-202ENST00000360642 RALBP11234 206 aa7.37□□□□□ -1.23
CLCN3-202ENST00000360642 MYL4P12829 197 aa7.37□□□□□ -1.23
CLCN3-202ENST00000360642 CPA3P15088 417 aa7.37□□□□□ -1.23
CLCN3-202ENST00000360642 PIK3CBP42338 1070 aa7.37□□□□□ -1.23
CLCN3-202ENST00000360642 NPY2RP49146 381 aa7.37□□□□□ -1.23
CLCN3-202ENST00000360642 ERFP50548 548 aa7.37□□□□□ -1.23
CLCN3-202ENST00000360642 ACTR3P61158 418 aa7.37□□□□□ -1.23
CLCN3-202ENST00000360642 RCN2Q14257 317 aa7.37□□□□□ -1.23
CLCN3-202ENST00000360642 CCL14Q16627 93 aa7.37□□□□□ -1.23
CLCN3-202ENST00000360642 TAF2Q6P1X5 1199 aa7.37□□□□□ -1.23
CLCN3-202ENST00000360642 MYLK4Q86YV6 388 aaPredicted RBP7.37□□□□□ -1.23
CLCN3-202ENST00000360642 SCML4Q8N228 414 aa7.37□□□□□ -1.23
CLCN3-202ENST00000360642 GAD1Q99259 594 aa7.37□□□□□ -1.23
CLCN3-202ENST00000360642 RTP3Q9BQQ7 232 aa7.37□□□□□ -1.23
CLCN3-202ENST00000360642 FAM96AQ9H5X1 160 aa7.37□□□□□ -1.23
CLCN3-202ENST00000360642 TCF7L1Q9HCS4 588 aa7.37□□□□□ -1.23
CLCN3-202ENST00000360642 OR12D3Q9UGF7 316 aa7.37□□□□□ -1.23
CLCN3-202ENST00000360642 SLC7A8Q9UHI5 535 aa7.37□□□□□ -1.23
CLCN3-202ENST00000360642 CPA4Q9UI42 421 aa7.37□□□□□ -1.23
CLCN3-202ENST00000360642 ST3GAL5Q9UNP4 418 aa7.37□□□□□ -1.23
CLCN3-202ENST00000360642 TIMM13Q9Y5L4 95 aaPredicted RBP7.37□□□□□ -1.23
CLCN3-202ENST00000360642 DOCK3Q8IZD9 2030 aa7.37□□□□□ -1.23
CLCN3-202ENST00000360642 A0A088AWK7 358 aa7.37□□□□□ -1.23
CLCN3-202ENST00000360642 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.37□□□□□ -1.23
CLCN3-202ENST00000360642 FAM95CA0A1B0GW59 222 aa7.37□□□□□ -1.23
CLCN3-202ENST00000360642 NVLO15381 856 aaKnown RBP7.37□□□□□ -1.23
CLCN3-202ENST00000360642 MRPS6P82932 125 aaKnown RBP7.37□□□□□ -1.23
CLCN3-202ENST00000360642 ZNF33AQ06730 810 aa7.37□□□□□ -1.23
CLCN3-202ENST00000360642 TRIM25Q14258 630 aaKnown RBP7.37□□□□□ -1.23
CLCN3-202ENST00000360642 UPP1Q16831 310 aa7.37□□□□□ -1.23
CLCN3-202ENST00000360642 TRMT5Q32P41 509 aaKnown RBP7.37□□□□□ -1.23
CLCN3-202ENST00000360642 CERCAMQ5T4B2 595 aa7.37□□□□□ -1.23
CLCN3-202ENST00000360642 ARTNQ5T4W7 220 aa7.37□□□□□ -1.23
CLCN3-202ENST00000360642 FAM171BQ6P995 826 aa7.37□□□□□ -1.23
CLCN3-202ENST00000360642 LRRC74BQ6ZQY2 392 aa7.37□□□□□ -1.23
CLCN3-202ENST00000360642 TMEM151AQ8N4L1 468 aa7.37□□□□□ -1.23
CLCN3-202ENST00000360642 PPP4R1Q8TF05 950 aa7.37□□□□□ -1.23
CLCN3-202ENST00000360642 IRGQQ8WZA9 623 aa7.37□□□□□ -1.23
CLCN3-202ENST00000360642 AZIN2Q96A70 460 aa7.37□□□□□ -1.23
CLCN3-202ENST00000360642 SMARCD1Q96GM5 515 aa7.37□□□□□ -1.23
CLCN3-202ENST00000360642 CLPTM1LQ96KA5 538 aa7.37□□□□□ -1.23
CLCN3-202ENST00000360642 IL22Q9GZX6 179 aa7.37□□□□□ -1.23
CLCN3-202ENST00000360642 TKTL2Q9H0I9 626 aa7.37□□□□□ -1.23
CLCN3-202ENST00000360642 WDCPQ9H6R7 721 aa7.37□□□□□ -1.23
CLCN3-202ENST00000360642 CHRAC1Q9NRG0 131 aa7.37□□□□□ -1.23
CLCN3-202ENST00000360642 GPATCH2Q9NW75 528 aa7.37□□□□□ -1.23
CLCN3-202ENST00000360642 CORO1CQ9ULV4 474 aaPredicted RBP7.37□□□□□ -1.23
CLCN3-202ENST00000360642 RNF112Q9ULX5 631 aa7.37□□□□□ -1.23
CLCN3-202ENST00000360642 NEU3Q9UQ49 428 aa7.37□□□□□ -1.23
CLCN3-202ENST00000360642 SNX10Q9Y5X0 201 aa7.37□□□□□ -1.23
CLCN3-202ENST00000360642 SLC4A7Q9Y6M7 1214 aa7.37□□□□□ -1.23
CLCN3-202ENST00000360642 ARL5CA6NH57 179 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms