RNA–Protein interactions for RNA: ENST00000358694.10

CTNND1-201, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-201ENST00000358694 ABHD5Q8WTS1 349 aa8.87□□□□□ -0.99
CTNND1-201ENST00000358694 LINGO1Q96FE5 620 aa8.87□□□□□ -0.99
CTNND1-201ENST00000358694 CDCA5Q96FF9 252 aa8.87□□□□□ -0.99
CTNND1-201ENST00000358694 PDCD2LQ9BRP1 358 aa8.87□□□□□ -0.99
CTNND1-201ENST00000358694 CNOT6Q9ULM6 557 aaKnown RBP8.87□□□□□ -0.99
CTNND1-201ENST00000358694 DMTF1Q9Y222 760 aa8.87□□□□□ -0.99
CTNND1-201ENST00000358694 CDK12Q9NYV4 1490 aaPredicted RBP8.86□□□□□ -0.99
CTNND1-201ENST00000358694 USP42Q9H9J4 1324 aaKnown RBP8.86□□□□□ -0.99
CTNND1-201ENST00000358694 PCP4L1A6NKN8 68 aa8.86□□□□□ -0.99
CTNND1-201ENST00000358694 ACKR2O00590 384 aa8.86□□□□□ -0.99
CTNND1-201ENST00000358694 UBXN7O94888 489 aa8.86□□□□□ -0.99
CTNND1-201ENST00000358694 LRIG2O94898 1065 aa8.86□□□□□ -0.99
CTNND1-201ENST00000358694 TRBC1P01850 177 aa8.86□□□□□ -0.99
CTNND1-201ENST00000358694 EPHX1P07099 455 aa8.86□□□□□ -0.99
CTNND1-201ENST00000358694 GNSP15586 552 aa8.86□□□□□ -0.99
CTNND1-201ENST00000358694 CMPK1P30085 196 aa8.86□□□□□ -0.99
CTNND1-201ENST00000358694 CYP2C18P33260 490 aa8.86□□□□□ -0.99
CTNND1-201ENST00000358694 CDK16Q00536 496 aa8.86□□□□□ -0.99
CTNND1-201ENST00000358694 ENPEPQ07075 957 aa8.86□□□□□ -0.99
CTNND1-201ENST00000358694 PDCD4Q53EL6 469 aaKnown RBP8.86□□□□□ -0.99
CTNND1-201ENST00000358694 GPR158Q5T848 1215 aa8.86□□□□□ -0.99
CTNND1-201ENST00000358694 SLC8B1Q6J4K2 584 aa8.86□□□□□ -0.99
CTNND1-201ENST00000358694 TMPRSS11BQ86T26 416 aa8.86□□□□□ -0.99
CTNND1-201ENST00000358694 CROCCP3Q8IVE0 287 aa8.86□□□□□ -0.99
CTNND1-201ENST00000358694 FBXW8Q8N3Y1 598 aa8.86□□□□□ -0.99
CTNND1-201ENST00000358694 OR6K2Q8NGY2 324 aa8.86□□□□□ -0.99
CTNND1-201ENST00000358694 NAT14Q8WUY8 206 aa8.86□□□□□ -0.99
CTNND1-201ENST00000358694 CKAP2Q8WWK9 683 aa8.86□□□□□ -0.99
CTNND1-201ENST00000358694 ING5Q8WYH8 240 aa8.86□□□□□ -0.99
CTNND1-201ENST00000358694 CLP1Q92989 425 aaKnown RBP8.86□□□□□ -0.99
CTNND1-201ENST00000358694 COPS4Q9BT78 406 aa8.86□□□□□ -0.99
CTNND1-201ENST00000358694 TBC1D10AQ9BXI6 508 aa8.86□□□□□ -0.99
CTNND1-201ENST00000358694 FTHL17Q9BXU8 183 aa8.86□□□□□ -0.99
CTNND1-201ENST00000358694 ZNF639Q9UID6 485 aa8.86□□□□□ -0.99
CTNND1-201ENST00000358694 POLR3HQ9Y535 204 aaPredicted RBP8.86□□□□□ -0.99
CTNND1-201ENST00000358694 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.86□□□□□ -0.99
CTNND1-201ENST00000358694 E2F3O00716 465 aa8.86□□□□□ -0.99
CTNND1-201ENST00000358694 CXCL11O14625 94 aa8.86□□□□□ -0.99
CTNND1-201ENST00000358694 CBFA2T3O75081 653 aa8.86□□□□□ -0.99
CTNND1-201ENST00000358694 RLN2P04090 185 aa8.86□□□□□ -0.99
CTNND1-201ENST00000358694 LPOP22079 712 aaPredicted RBP8.86□□□□□ -0.99
CTNND1-201ENST00000358694 ITPKAP23677 461 aa8.86□□□□□ -0.99
CTNND1-201ENST00000358694 MC4RP32245 332 aa8.86□□□□□ -0.99
CTNND1-201ENST00000358694 PPATQ06203 517 aa8.86□□□□□ -0.99
CTNND1-201ENST00000358694 ITGB3BPQ13352 177 aaPredicted RBP8.86□□□□□ -0.99
CTNND1-201ENST00000358694 DPYSL3Q14195 570 aa8.86□□□□□ -0.99
CTNND1-201ENST00000358694 SPERTQ8NA61 448 aa8.86□□□□□ -0.99
CTNND1-201ENST00000358694 PIK3C3Q8NEB9 887 aa8.86□□□□□ -0.99
CTNND1-201ENST00000358694 HEXDCQ8WVB3 486 aa8.86□□□□□ -0.99
CTNND1-201ENST00000358694 TCEAL3Q969E4 200 aa8.86□□□□□ -0.99
CTNND1-201ENST00000358694 ZNF285Q96NJ3 590 aa8.86□□□□□ -0.99
CTNND1-201ENST00000358694 SPAG4Q9NPE6 437 aa8.86□□□□□ -0.99
CTNND1-201ENST00000358694 RDH8Q9NYR8 311 aa8.86□□□□□ -0.99
CTNND1-201ENST00000358694 DEC1Q9P2X7 70 aa8.86□□□□□ -0.99
CTNND1-201ENST00000358694 UPB1Q9UBR1 384 aa8.86□□□□□ -0.99
CTNND1-201ENST00000358694 KDM5CP41229 1560 aa8.86□□□□□ -0.99
CTNND1-201ENST00000358694 CDC42BPGQ6DT37 1551 aa8.86□□□□□ -0.99
CTNND1-201ENST00000358694 MAPKBP1O60336 1514 aa8.86□□□□□ -0.99
CTNND1-201ENST00000358694 SHANK2Q9UPX8 1470 aa8.86□□□□□ -0.99
CTNND1-201ENST00000358694 NUAK1O60285 661 aa8.86□□□□□ -0.99
CTNND1-201ENST00000358694 NOL4O94818 638 aa8.86□□□□□ -0.99
CTNND1-201ENST00000358694 AP2A2O94973 939 aa8.86□□□□□ -0.99
CTNND1-201ENST00000358694 ALOX5P09917 674 aa8.86□□□□□ -0.99
CTNND1-201ENST00000358694 CORO7P57737 925 aa8.86□□□□□ -0.99
CTNND1-201ENST00000358694 ILF3Q12906 894 aaKnown RBP eCLIP8.86□□□□□ -0.992e-7■■□□□ 13.8
CTNND1-201ENST00000358694 RAB39AQ14964 217 aa8.86□□□□□ -0.99
CTNND1-201ENST00000358694 MSANTD2Q6P1R3 559 aa8.86□□□□□ -0.99
CTNND1-201ENST00000358694 RBFAQ8N0V3 343 aa8.86□□□□□ -0.99
CTNND1-201ENST00000358694 ZNF611Q8N823 705 aa8.86□□□□□ -0.99
CTNND1-201ENST00000358694 GIPC3Q8TF64 312 aa8.86□□□□□ -0.99
CTNND1-201ENST00000358694 ANKRD27Q96NW4 1050 aa8.86□□□□□ -0.99
CTNND1-201ENST00000358694 MEMO1Q9Y316 297 aa8.86□□□□□ -0.99
CTNND1-201ENST00000358694 ZSCAN5CA6NGD5 496 aaPredicted RBP8.86□□□□□ -0.99
CTNND1-201ENST00000358694 PRLRP16471 622 aa8.86□□□□□ -0.99
CTNND1-201ENST00000358694 CDH4P55283 916 aa8.86□□□□□ -0.99
CTNND1-201ENST00000358694 CRADDP78560 199 aa8.86□□□□□ -0.99
CTNND1-201ENST00000358694 MRPS6P82932 125 aaKnown RBP8.86□□□□□ -0.99
CTNND1-201ENST00000358694 PRKG2Q13237 762 aa8.86□□□□□ -0.99
CTNND1-201ENST00000358694 UBXN2BQ14CS0 331 aa8.86□□□□□ -0.99
CTNND1-201ENST00000358694 CARTPTQ16568 116 aa8.86□□□□□ -0.99
CTNND1-201ENST00000358694 SDHAF4Q5VUM1 108 aa8.86□□□□□ -0.99
CTNND1-201ENST00000358694 NAIF1Q69YI7 327 aaPredicted RBP8.86□□□□□ -0.99
CTNND1-201ENST00000358694 LRRC69Q6ZNQ3 347 aa8.86□□□□□ -0.99
CTNND1-201ENST00000358694 AP1S3Q96PC3 154 aa8.86□□□□□ -0.99
CTNND1-201ENST00000358694 CFAP97Q9P2B7 532 aa8.86□□□□□ -0.99
CTNND1-201ENST00000358694 GRIN2DO15399 1336 aa8.86□□□□□ -0.99
CTNND1-201ENST00000358694 ASTN2O75129 1339 aaPredicted RBP8.86□□□□□ -0.99
CTNND1-201ENST00000358694 LRRC72A6NJI9 287 aa8.86□□□□□ -0.99
CTNND1-201ENST00000358694 ADM5C9JUS6 153 aa8.86□□□□□ -0.99
CTNND1-201ENST00000358694 CCL16O15467 120 aa8.86□□□□□ -0.99
CTNND1-201ENST00000358694 CLCN7P51798 805 aa8.86□□□□□ -0.99
CTNND1-201ENST00000358694 TXNL4AP83876 142 aaKnown RBP8.86□□□□□ -0.99
CTNND1-201ENST00000358694 PUM1Q14671 1186 aaKnown RBP eCLIP8.86□□□□□ -0.99
CTNND1-201ENST00000358694 TMEM63BQ5T3F8 832 aa8.86□□□□□ -0.99
CTNND1-201ENST00000358694 MOXD1Q6UVY6 613 aa8.86□□□□□ -0.99
CTNND1-201ENST00000358694 UNC5AQ6ZN44 842 aa8.86□□□□□ -0.99
CTNND1-201ENST00000358694 CLHC1Q8NHS4 586 aa8.86□□□□□ -0.99
CTNND1-201ENST00000358694 ZCCHC10Q8TBK6 192 aa8.86□□□□□ -0.99
CTNND1-201ENST00000358694 ZNF75CPQ92670 426 aaPredicted RBP8.86□□□□□ -0.99
CTNND1-201ENST00000358694 PLA2G12BQ9BX93 195 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms