RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 BDNFP23560 247 aa17.67■□□□□ 0.42
RTN4-204ENST00000357732 KCNC1P48547 511 aa17.67■□□□□ 0.42
RTN4-204ENST00000357732 RPS6KA2Q15349 733 aa17.67■□□□□ 0.42
RTN4-204ENST00000357732 VPS26BQ4G0F5 336 aa17.67■□□□□ 0.42
RTN4-204ENST00000357732 MARC1Q5VT66 337 aa17.67■□□□□ 0.42
RTN4-204ENST00000357732 MRNIPQ6NTE8 343 aa17.67■□□□□ 0.42
RTN4-204ENST00000357732 PRR23BQ6ZRT6 265 aa17.67■□□□□ 0.42
RTN4-204ENST00000357732 TLK2Q86UE8 772 aa17.67■□□□□ 0.42
RTN4-204ENST00000357732 CMTR2Q8IYT2 770 aaKnown RBP17.67■□□□□ 0.42
RTN4-204ENST00000357732 TEX26Q8N6G2 289 aa17.67■□□□□ 0.42
RTN4-204ENST00000357732 OR6P1Q8NGX9 317 aa17.67■□□□□ 0.42
RTN4-204ENST00000357732 OSCP1Q8WVF1 389 aa17.67■□□□□ 0.42
RTN4-204ENST00000357732 HDAC10Q969S8 669 aa17.67■□□□□ 0.42
RTN4-204ENST00000357732 VPS50Q96JG6 964 aa17.67■□□□□ 0.42
RTN4-204ENST00000357732 SERPINB11Q96P15 392 aa17.67■□□□□ 0.42
RTN4-204ENST00000357732 NUSAP1Q9BXS6 441 aaKnown RBP17.67■□□□□ 0.42
RTN4-204ENST00000357732 SLC52A3Q9NQ40 469 aa17.67■□□□□ 0.42
RTN4-204ENST00000357732 FAM105AQ9NUU6 356 aa17.67■□□□□ 0.42
RTN4-204ENST00000357732 NDFIP2Q9NV92 336 aa17.67■□□□□ 0.42
RTN4-204ENST00000357732 ZNF639Q9UID6 485 aa17.67■□□□□ 0.42
RTN4-204ENST00000357732 GNAO1P09471 354 aa17.66■□□□□ 0.42
RTN4-204ENST00000357732 SLC2A3P11169 496 aa17.66■□□□□ 0.42
RTN4-204ENST00000357732 OGNP20774 298 aaKnown RBP17.66■□□□□ 0.42
RTN4-204ENST00000357732 HOXC8P31273 242 aa17.66■□□□□ 0.42
RTN4-204ENST00000357732 MLLT6P55198 1093 aaPredicted RBP17.66■□□□□ 0.42
RTN4-204ENST00000357732 GRSF1Q12849 480 aaKnown RBP eCLIP17.66■□□□□ 0.42
RTN4-204ENST00000357732 LCP2Q13094 533 aa17.66■□□□□ 0.42
RTN4-204ENST00000357732 FXNQ16595 210 aa17.66■□□□□ 0.42
RTN4-204ENST00000357732 UPP1Q16831 310 aa17.66■□□□□ 0.42
RTN4-204ENST00000357732 C3orf58Q8NDZ4 430 aa17.66■□□□□ 0.42
RTN4-204ENST00000357732 ZC3H15Q8WU90 426 aaKnown RBP17.66■□□□□ 0.42
RTN4-204ENST00000357732 BORCS5Q969J3 196 aa17.66■□□□□ 0.42
RTN4-204ENST00000357732 LIN28AQ9H9Z2 209 aaKnown RBP17.66■□□□□ 0.42
RTN4-204ENST00000357732 PALMDQ9NP74 551 aa17.66■□□□□ 0.42
RTN4-204ENST00000357732 TBC1D23Q9NUY8 699 aa17.66■□□□□ 0.42
RTN4-204ENST00000357732 RHBDL2Q9NX52 303 aa17.66■□□□□ 0.42
RTN4-204ENST00000357732 PKD2L2Q9NZM6 624 aa17.66■□□□□ 0.42
RTN4-204ENST00000357732 EBF1Q9UH73 591 aa17.66■□□□□ 0.42
RTN4-204ENST00000357732 OAZ3Q9UMX2 235 aa17.66■□□□□ 0.42
RTN4-204ENST00000357732 C17orf102A2RUQ5 167 aa17.66■□□□□ 0.42
RTN4-204ENST00000357732 PRR35P0CG20 571 aa17.66■□□□□ 0.42
RTN4-204ENST00000357732 ZNF37AP17032 561 aaPredicted RBP17.66■□□□□ 0.42
RTN4-204ENST00000357732 RCAN2Q14206 197 aa17.66■□□□□ 0.42
RTN4-204ENST00000357732 GEN1Q17RS7 908 aa17.66■□□□□ 0.42
RTN4-204ENST00000357732 ZNF829Q3KNS6 432 aaPredicted RBP17.66■□□□□ 0.42
RTN4-204ENST00000357732 PITRM1Q5JRX3 1037 aa17.66■□□□□ 0.42
RTN4-204ENST00000357732 TAF2Q6P1X5 1199 aa17.66■□□□□ 0.42
RTN4-204ENST00000357732 USP51Q70EK9 711 aa17.66■□□□□ 0.42
RTN4-204ENST00000357732 LYSMD3Q7Z3D4 306 aa17.66■□□□□ 0.42
RTN4-204ENST00000357732 PROSER1Q86XN7 944 aa17.66■□□□□ 0.42
RTN4-204ENST00000357732 TMEM125Q96AQ2 219 aa17.66■□□□□ 0.42
RTN4-204ENST00000357732 ALG2Q9H553 416 aa17.66■□□□□ 0.42
RTN4-204ENST00000357732 ZNF510Q9Y2H8 683 aa17.66■□□□□ 0.42
RTN4-204ENST00000357732 FADS3Q9Y5Q0 445 aa17.66■□□□□ 0.42
RTN4-204ENST00000357732 HS3ST4Q9Y661 456 aa17.66■□□□□ 0.42
RTN4-204ENST00000357732 hCG_2014768A0A024R1R8 64 aa17.65■□□□□ 0.42
RTN4-204ENST00000357732 LOC285095A0A1B0GVY8 99 aa17.65■□□□□ 0.42
RTN4-204ENST00000357732 TCRBV5S2A0A599 114 aa17.65■□□□□ 0.42
RTN4-204ENST00000357732 EEDO75530 441 aaKnown RBP17.65■□□□□ 0.42
RTN4-204ENST00000357732 GLP2RO95838 553 aa17.65■□□□□ 0.42
RTN4-204ENST00000357732 RHOQP17081 205 aa17.65■□□□□ 0.42
RTN4-204ENST00000357732 CPT1AP50416 773 aa17.65■□□□□ 0.42
RTN4-204ENST00000357732 BEX3Q00994 111 aa17.65■□□□□ 0.42
RTN4-204ENST00000357732 CYP51A1Q16850 503 aa17.65■□□□□ 0.42
RTN4-204ENST00000357732 TIGD5Q53EQ6 642 aa17.65■□□□□ 0.42
RTN4-204ENST00000357732 KDELC2Q7Z4H8 507 aa17.65■□□□□ 0.42
RTN4-204ENST00000357732 TUBGCP3Q96CW5 907 aa17.65■□□□□ 0.42
RTN4-204ENST00000357732 ATOH8Q96SQ7 321 aa17.65■□□□□ 0.42
RTN4-204ENST00000357732 GAD1Q99259 594 aa17.65■□□□□ 0.42
RTN4-204ENST00000357732 SEZ6LQ9BYH1 1024 aa17.65■□□□□ 0.42
RTN4-204ENST00000357732 SYTL2Q9HCH5 934 aa17.65■□□□□ 0.42
RTN4-204ENST00000357732 POLG2Q9UHN1 485 aa17.65■□□□□ 0.42
RTN4-204ENST00000357732 ANAPC2Q9UJX6 822 aa17.65■□□□□ 0.42
RTN4-204ENST00000357732 GPR45Q9Y5Y3 372 aa17.65■□□□□ 0.42
RTN4-204ENST00000357732 BPTFQ12830 3046 aa17.65■□□□□ 0.42
RTN4-204ENST00000357732 MMP2P08253 660 aa17.65■□□□□ 0.42
RTN4-204ENST00000357732 HGFP14210 728 aa17.65■□□□□ 0.42
RTN4-204ENST00000357732 CD86P42081 329 aa17.65■□□□□ 0.42
RTN4-204ENST00000357732 RPS9P46781 194 aaKnown RBP17.65■□□□□ 0.42
RTN4-204ENST00000357732 KCNK10P57789 538 aa17.65■□□□□ 0.42
RTN4-204ENST00000357732 SPIDRQ14159 915 aa17.65■□□□□ 0.42
RTN4-204ENST00000357732 C9orf131Q5VYM1 1079 aa17.65■□□□□ 0.42
RTN4-204ENST00000357732 DDIASQ8IXT1 998 aa17.65■□□□□ 0.42
RTN4-204ENST00000357732 SNX31Q8N9S9 440 aa17.65■□□□□ 0.42
RTN4-204ENST00000357732 KLHL23Q8NBE8 558 aa17.65■□□□□ 0.42
RTN4-204ENST00000357732 NOL6Q9H6R4 1146 aaKnown RBP17.65■□□□□ 0.42
RTN4-204ENST00000357732 RPF2Q9H7B2 306 aaKnown RBP17.65■□□□□ 0.42
RTN4-204ENST00000357732 NT5MQ9NPB1 228 aa17.65■□□□□ 0.42
RTN4-204ENST00000357732 UBXN8O00124 270 aa17.64■□□□□ 0.41
RTN4-204ENST00000357732 GIPC1O14908 333 aa17.64■□□□□ 0.41
RTN4-204ENST00000357732 LDB2O43679 373 aa17.64■□□□□ 0.41
RTN4-204ENST00000357732 KERAO60938 352 aa17.64■□□□□ 0.41
RTN4-204ENST00000357732 MT-CO1P00395 513 aa17.64■□□□□ 0.41
RTN4-204ENST00000357732 LDLRP01130 860 aa17.64■□□□□ 0.41
RTN4-204ENST00000357732 MTHFD2P13995 350 aa17.64■□□□□ 0.41
RTN4-204ENST00000357732 ZNF12P17014 697 aa17.64■□□□□ 0.41
RTN4-204ENST00000357732 HTR1EP28566 365 aa17.64■□□□□ 0.41
RTN4-204ENST00000357732 ENTPD1P49961 510 aa17.64■□□□□ 0.41
RTN4-204ENST00000357732 HLCSP50747 726 aa17.64■□□□□ 0.41
RTN4-204ENST00000357732 CYBRD1Q53TN4 286 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms