RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 CDC7O00311 574 aa13.88□□□□□ -0.19
TRIM4-201ENST00000349062 GRID2O43424 1007 aa13.88□□□□□ -0.19
TRIM4-201ENST00000349062 TRIM16O95361 564 aa13.88□□□□□ -0.19
TRIM4-201ENST00000349062 NDST3O95803 873 aa13.88□□□□□ -0.19
TRIM4-201ENST00000349062 UGT1A6P19224 532 aa13.88□□□□□ -0.19
TRIM4-201ENST00000349062 UGT1A1P22309 533 aa13.88□□□□□ -0.19
TRIM4-201ENST00000349062 UGT1A4P22310 534 aa13.88□□□□□ -0.19
TRIM4-201ENST00000349062 ATP5F1P24539 256 aaPredicted RBP13.88□□□□□ -0.19
TRIM4-201ENST00000349062 UGT1A3P35503 534 aa13.88□□□□□ -0.19
TRIM4-201ENST00000349062 UGT1A5P35504 534 aa13.88□□□□□ -0.19
TRIM4-201ENST00000349062 CDC16Q13042 620 aa13.88□□□□□ -0.19
TRIM4-201ENST00000349062 TSNQ15631 228 aaKnown RBP13.88□□□□□ -0.19
TRIM4-201ENST00000349062 ZNF549Q6P9A3 640 aa13.88□□□□□ -0.19
TRIM4-201ENST00000349062 CUZD1Q86UP6 607 aa13.88□□□□□ -0.19
TRIM4-201ENST00000349062 SATL1Q86VE3 508 aa13.88□□□□□ -0.19
TRIM4-201ENST00000349062 GABPB2Q8TAK5 448 aaPredicted RBP13.88□□□□□ -0.19
TRIM4-201ENST00000349062 APOL5Q9BWW9 433 aa13.88□□□□□ -0.19
TRIM4-201ENST00000349062 RNF112Q9ULX5 631 aa13.88□□□□□ -0.19
TRIM4-201ENST00000349062 ANKRD6Q9Y2G4 727 aa13.88□□□□□ -0.19
TRIM4-201ENST00000349062 NPEPPSL1A6NEC2 478 aa13.87□□□□□ -0.19
TRIM4-201ENST00000349062 C2orf81A6NN90 581 aa13.87□□□□□ -0.19
TRIM4-201ENST00000349062 ZNF195O14628 629 aa13.87□□□□□ -0.19
TRIM4-201ENST00000349062 AGTR2P50052 363 aa13.87□□□□□ -0.19
TRIM4-201ENST00000349062 YBEYP58557 167 aaPredicted RBP13.87□□□□□ -0.19
TRIM4-201ENST00000349062 NKX3-2P78367 333 aa13.87□□□□□ -0.19
TRIM4-201ENST00000349062 CBX2Q14781 532 aaPredicted RBP13.87□□□□□ -0.19
TRIM4-201ENST00000349062 LIN52Q52LA3 116 aa13.87□□□□□ -0.19
TRIM4-201ENST00000349062 MIA3Q5JRA6 1907 aa13.87□□□□□ -0.19
TRIM4-201ENST00000349062 EYSQ5T1H1 3165 aa13.87□□□□□ -0.19
TRIM4-201ENST00000349062 TMEM151AQ8N4L1 468 aa13.87□□□□□ -0.19
TRIM4-201ENST00000349062 SNRNP27Q8WVK2 155 aaKnown RBP13.87□□□□□ -0.19
TRIM4-201ENST00000349062 TRAPPC9Q96Q05 1148 aa13.87□□□□□ -0.19
TRIM4-201ENST00000349062 GCNAQ96QF7 691 aa13.87□□□□□ -0.19
TRIM4-201ENST00000349062 PIF1Q9H611 641 aa13.87□□□□□ -0.19
TRIM4-201ENST00000349062 MRPL17Q9NRX2 175 aaKnown RBP13.87□□□□□ -0.19
TRIM4-201ENST00000349062 SH3BP1Q9Y3L3 701 aa13.87□□□□□ -0.19
TRIM4-201ENST00000349062 H3BMM5 538 aa13.87□□□□□ -0.19
TRIM4-201ENST00000349062 MATN2O00339 956 aa13.87□□□□□ -0.19
TRIM4-201ENST00000349062 HNRNPRO43390 633 aaKnown RBP13.87□□□□□ -0.19
TRIM4-201ENST00000349062 KATNA1O75449 491 aa13.87□□□□□ -0.19
TRIM4-201ENST00000349062 IPO13O94829 963 aaKnown RBP13.87□□□□□ -0.19
TRIM4-201ENST00000349062 CDH4P55283 916 aa13.87□□□□□ -0.19
TRIM4-201ENST00000349062 TRAF2Q12933 501 aa13.87□□□□□ -0.19
TRIM4-201ENST00000349062 CMTM8Q8IZV2 173 aa13.87□□□□□ -0.19
TRIM4-201ENST00000349062 ZNF366Q8N895 744 aa13.87□□□□□ -0.19
TRIM4-201ENST00000349062 RAB3IL1Q8TBN0 382 aa13.87□□□□□ -0.19
TRIM4-201ENST00000349062 MPP4Q96JB8 637 aa13.87□□□□□ -0.19
TRIM4-201ENST00000349062 GPR78Q96P69 363 aa13.87□□□□□ -0.19
TRIM4-201ENST00000349062 CDK15Q96Q40 435 aa13.87□□□□□ -0.19
TRIM4-201ENST00000349062 CWH43Q9H720 699 aa13.87□□□□□ -0.19
TRIM4-201ENST00000349062 ELAC1Q9H777 363 aaKnown RBP13.87□□□□□ -0.19
TRIM4-201ENST00000349062 DRGXA6NNA5 263 aa13.86□□□□□ -0.19
TRIM4-201ENST00000349062 PITPNM1O00562 1244 aa13.86□□□□□ -0.19
TRIM4-201ENST00000349062 CACNG3O60359 315 aa13.86□□□□□ -0.19
TRIM4-201ENST00000349062 CLDN11O75508 207 aa13.86□□□□□ -0.19
TRIM4-201ENST00000349062 RFPL2O75678 378 aa13.86□□□□□ -0.19
TRIM4-201ENST00000349062 RPP40O75818 363 aaKnown RBP13.86□□□□□ -0.19
TRIM4-201ENST00000349062 APOA4P06727 396 aa13.86□□□□□ -0.19
TRIM4-201ENST00000349062 LINC00032P0C843 101 aa13.86□□□□□ -0.19
TRIM4-201ENST00000349062 PIK3CGP48736 1102 aa13.86□□□□□ -0.19
TRIM4-201ENST00000349062 CLCN5P51795 746 aa13.86□□□□□ -0.19
TRIM4-201ENST00000349062 C1QTNF8P60827 252 aa13.86□□□□□ -0.19
TRIM4-201ENST00000349062 RPS6KA2Q15349 733 aa13.86□□□□□ -0.19
TRIM4-201ENST00000349062 DNAL1Q4LDG9 190 aa13.86□□□□□ -0.19
TRIM4-201ENST00000349062 SPRED2Q7Z698 418 aa13.86□□□□□ -0.19
TRIM4-201ENST00000349062 RBM23Q86U06 439 aaKnown RBP13.86□□□□□ -0.19
TRIM4-201ENST00000349062 SPATA24Q86W54 205 aa13.86□□□□□ -0.19
TRIM4-201ENST00000349062 CCDC117Q8IWD4 279 aaPredicted RBP13.86□□□□□ -0.19
TRIM4-201ENST00000349062 BBS7Q8IWZ6 715 aa13.86□□□□□ -0.19
TRIM4-201ENST00000349062 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.86□□□□□ -0.19
TRIM4-201ENST00000349062 CEP70Q8NHQ1 597 aa13.86□□□□□ -0.19
TRIM4-201ENST00000349062 BRSK1Q8TDC3 778 aa13.86□□□□□ -0.19
TRIM4-201ENST00000349062 HHIPL1Q96JK4 782 aa13.86□□□□□ -0.19
TRIM4-201ENST00000349062 SLC30A3Q99726 388 aa13.86□□□□□ -0.19
TRIM4-201ENST00000349062 SPATA16Q9BXB7 569 aa13.86□□□□□ -0.19
TRIM4-201ENST00000349062 CIDEBQ9UHD4 219 aa13.86□□□□□ -0.19
TRIM4-201ENST00000349062 THSD7BQ9C0I4 1608 aa13.86□□□□□ -0.19
TRIM4-201ENST00000349062 A0A1B0GVM2 712 aa13.86□□□□□ -0.19
TRIM4-201ENST00000349062 ANKRD33BA6NCL7 494 aa13.86□□□□□ -0.19
TRIM4-201ENST00000349062 TCAF2A6NFQ2 919 aa13.86□□□□□ -0.19
TRIM4-201ENST00000349062 TRIM24O15164 1050 aa13.86□□□□□ -0.19
TRIM4-201ENST00000349062 TM7SF2O76062 418 aa13.86□□□□□ -0.19
TRIM4-201ENST00000349062 LRG1P02750 347 aa13.86□□□□□ -0.19
TRIM4-201ENST00000349062 FGF1P05230 155 aa13.86□□□□□ -0.19
TRIM4-201ENST00000349062 ITGAXP20702 1163 aa13.86□□□□□ -0.19
TRIM4-201ENST00000349062 ZNF33AQ06730 810 aa13.86□□□□□ -0.19
TRIM4-201ENST00000349062 RALGDSQ12967 914 aa13.86□□□□□ -0.19
TRIM4-201ENST00000349062 CYTH1Q15438 398 aa13.86□□□□□ -0.19
TRIM4-201ENST00000349062 OR4D1Q15615 310 aa13.86□□□□□ -0.19
TRIM4-201ENST00000349062 PLPP4Q5VZY2 271 aa13.86□□□□□ -0.19
TRIM4-201ENST00000349062 SLC8B1Q6J4K2 584 aa13.86□□□□□ -0.19
TRIM4-201ENST00000349062 LRRC49Q8IUZ0 686 aa13.86□□□□□ -0.19
TRIM4-201ENST00000349062 CPNE9Q8IYJ1 553 aa13.86□□□□□ -0.19
TRIM4-201ENST00000349062 FAM81AQ8TBF8 368 aa13.86□□□□□ -0.19
TRIM4-201ENST00000349062 TSPAN17Q96FV3 270 aa13.86□□□□□ -0.19
TRIM4-201ENST00000349062 PHF12Q96QT6 1004 aa13.86□□□□□ -0.19
TRIM4-201ENST00000349062 PREBQ9HCU5 417 aa13.86□□□□□ -0.19
TRIM4-201ENST00000349062 ARHGAP26Q9UNA1 814 aa13.86□□□□□ -0.19
TRIM4-201ENST00000349062 NLRC5Q86WI3 1866 aa13.86□□□□□ -0.19
TRIM4-201ENST00000349062 IGLV3-10A0A075B6K4 115 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms