RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 ALDH4A1P30038 563 aa16.37■□□□□ 0.21
SMARCA4-201ENST00000344626 LPCAT2Q7L5N7 544 aa16.37■□□□□ 0.21
SMARCA4-201ENST00000344626 RPAINQ86UA6 219 aa16.37■□□□□ 0.21
SMARCA4-201ENST00000344626 MTFMTQ96DP5 389 aaKnown RBP16.37■□□□□ 0.21
SMARCA4-201ENST00000344626 VRTNQ9H8Y1 702 aa16.37■□□□□ 0.21
SMARCA4-201ENST00000344626 CORO1CQ9ULV4 474 aaPredicted RBP16.37■□□□□ 0.21
SMARCA4-201ENST00000344626 H0Y858 1186 aa16.37■□□□□ 0.21
SMARCA4-201ENST00000344626 PRAMEF1O95521 474 aa16.37■□□□□ 0.21
SMARCA4-201ENST00000344626 RXRGP48443 463 aa16.37■□□□□ 0.21
SMARCA4-201ENST00000344626 FASTKQ14296 549 aaKnown RBP16.37■□□□□ 0.21
SMARCA4-201ENST00000344626 LDLRAP1Q5SW96 308 aa16.37■□□□□ 0.21
SMARCA4-201ENST00000344626 PIWIL4Q7Z3Z4 852 aaKnown RBP16.37■□□□□ 0.21
SMARCA4-201ENST00000344626 RABGEF1Q9UJ41 708 aa16.37■□□□□ 0.21
SMARCA4-201ENST00000344626 NEMP2A6NFY4 417 aa16.37■□□□□ 0.21
SMARCA4-201ENST00000344626 AVILO75366 819 aa16.37■□□□□ 0.21
SMARCA4-201ENST00000344626 WDR47O94967 919 aa16.37■□□□□ 0.21
SMARCA4-201ENST00000344626 CDH3P22223 829 aa16.37■□□□□ 0.21
SMARCA4-201ENST00000344626 SF1Q15637 639 aaKnown RBP16.37■□□□□ 0.21
SMARCA4-201ENST00000344626 PACS1Q6VY07 963 aa16.37■□□□□ 0.21
SMARCA4-201ENST00000344626 C2orf73Q8N5S3 287 aaPredicted RBP16.37■□□□□ 0.21
SMARCA4-201ENST00000344626 EFCAB3Q8N7B9 438 aa16.37■□□□□ 0.21
SMARCA4-201ENST00000344626 OR10T2Q8NGX3 314 aa16.37■□□□□ 0.21
SMARCA4-201ENST00000344626 TRPC4APQ8TEL6 797 aa16.37■□□□□ 0.21
SMARCA4-201ENST00000344626 ATXN2LQ8WWM7 1075 aaKnown RBP16.37■□□□□ 0.21
SMARCA4-201ENST00000344626 HCSTQ9UBK5 93 aa16.37■□□□□ 0.21
SMARCA4-201ENST00000344626 TCAF1Q9Y4C2 921 aa16.37■□□□□ 0.21
SMARCA4-201ENST00000344626 V9GYQ6 96 aa16.37■□□□□ 0.21
SMARCA4-201ENST00000344626 TAF1AQ15573 450 aaPredicted RBP16.36■□□□□ 0.21
SMARCA4-201ENST00000344626 PCDH20Q8N6Y1 951 aaKnown RBP16.36■□□□□ 0.21
SMARCA4-201ENST00000344626 MRPL43Q8N983 215 aaKnown RBP16.36■□□□□ 0.21
SMARCA4-201ENST00000344626 FAM46DQ8NEK8 389 aa16.36■□□□□ 0.21
SMARCA4-201ENST00000344626 ADNPQ9H2P0 1102 aa16.36■□□□□ 0.21
SMARCA4-201ENST00000344626 SLC12A4Q9UP95 1085 aa16.36■□□□□ 0.21
SMARCA4-201ENST00000344626 C15orf38-AP3S2A0A0A6YYH1 394 aa16.36■□□□□ 0.21
SMARCA4-201ENST00000344626 A0A0U1RQJ8 604 aa16.36■□□□□ 0.21
SMARCA4-201ENST00000344626 PRKCGP05129 697 aa16.36■□□□□ 0.21
SMARCA4-201ENST00000344626 ITGB1P05556 798 aa16.36■□□□□ 0.21
SMARCA4-201ENST00000344626 UQCRBP14927 111 aa16.36■□□□□ 0.21
SMARCA4-201ENST00000344626 ALAS2P22557 587 aa16.36■□□□□ 0.21
SMARCA4-201ENST00000344626 GHRHRQ02643 423 aa16.36■□□□□ 0.21
SMARCA4-201ENST00000344626 RPL6Q02878 288 aaKnown RBP16.36■□□□□ 0.21
SMARCA4-201ENST00000344626 BHLHB9Q6PI77 547 aa16.36■□□□□ 0.21
SMARCA4-201ENST00000344626 GPRIN3Q6ZVF9 776 aa16.36■□□□□ 0.21
SMARCA4-201ENST00000344626 ARPINQ7Z6K5 226 aa16.36■□□□□ 0.21
SMARCA4-201ENST00000344626 CAMK1DQ8IU85 385 aa16.36■□□□□ 0.21
SMARCA4-201ENST00000344626 KCTD4Q8WVF5 259 aa16.36■□□□□ 0.21
SMARCA4-201ENST00000344626 MYLIPQ8WY64 445 aa16.36■□□□□ 0.21
SMARCA4-201ENST00000344626 KCTD14Q9BQ13 255 aaPredicted RBP16.36■□□□□ 0.21
SMARCA4-201ENST00000344626 TRIT1Q9H3H1 467 aaKnown RBP16.36■□□□□ 0.21
SMARCA4-201ENST00000344626 PSMD13Q9UNM6 376 aa16.36■□□□□ 0.21
SMARCA4-201ENST00000344626 H3BQF6 201 aa16.36■□□□□ 0.21
SMARCA4-201ENST00000344626 CLK3P49761 638 aaKnown RBP16.36■□□□□ 0.21
SMARCA4-201ENST00000344626 CREB5Q02930 508 aa16.36■□□□□ 0.21
SMARCA4-201ENST00000344626 RIN3Q8TB24 985 aa16.36■□□□□ 0.21
SMARCA4-201ENST00000344626 DNAJC1Q96KC8 554 aaKnown RBP16.36■□□□□ 0.21
SMARCA4-201ENST00000344626 EXO5Q9H790 373 aa16.36■□□□□ 0.21
SMARCA4-201ENST00000344626 CDH7Q9ULB5 785 aa16.36■□□□□ 0.21
SMARCA4-201ENST00000344626 HEBP2Q9Y5Z4 205 aa16.36■□□□□ 0.21
SMARCA4-201ENST00000344626 COL18A1P39060 1754 aa16.36■□□□□ 0.21
SMARCA4-201ENST00000344626 FAM155AB1AL88 458 aaPredicted RBP16.36■□□□□ 0.21
SMARCA4-201ENST00000344626 NEK3P51956 506 aa16.36■□□□□ 0.21
SMARCA4-201ENST00000344626 RUNX3Q13761 415 aa16.36■□□□□ 0.21
SMARCA4-201ENST00000344626 SUZ12Q15022 739 aaKnown RBP16.36■□□□□ 0.21
SMARCA4-201ENST00000344626 WLSQ5T9L3 541 aa16.36■□□□□ 0.21
SMARCA4-201ENST00000344626 C16orf46Q6P387 395 aa16.36■□□□□ 0.21
SMARCA4-201ENST00000344626 GDPD4Q6W3E5 623 aa16.36■□□□□ 0.21
SMARCA4-201ENST00000344626 CLYBLQ8N0X4 340 aa16.36■□□□□ 0.21
SMARCA4-201ENST00000344626 COCHO43405 550 aa16.35■□□□□ 0.21
SMARCA4-201ENST00000344626 HK2P52789 917 aa16.35■□□□□ 0.21
SMARCA4-201ENST00000344626 ZNF75CPQ92670 426 aaPredicted RBP16.35■□□□□ 0.21
SMARCA4-201ENST00000344626 SHISA4Q96DD7 197 aa16.35■□□□□ 0.21
SMARCA4-201ENST00000344626 TEKT5Q96M29 485 aa16.35■□□□□ 0.21
SMARCA4-201ENST00000344626 TCF12Q99081 682 aa16.35■□□□□ 0.21
SMARCA4-201ENST00000344626 PRRG3Q9BZD7 231 aa16.35■□□□□ 0.21
SMARCA4-201ENST00000344626 TPSD1Q9BZJ3 242 aa16.35■□□□□ 0.21
SMARCA4-201ENST00000344626 SUV39H2Q9H5I1 410 aa16.35■□□□□ 0.21
SMARCA4-201ENST00000344626 KAT7O95251 611 aa16.35■□□□□ 0.21
SMARCA4-201ENST00000344626 ZNF682O95780 498 aa16.35■□□□□ 0.21
SMARCA4-201ENST00000344626 NDUFA9Q16795 377 aa16.35■□□□□ 0.21
SMARCA4-201ENST00000344626 IRGCQ6NXR0 463 aa16.35■□□□□ 0.21
SMARCA4-201ENST00000344626 TAS1R3Q7RTX0 852 aa16.35■□□□□ 0.21
SMARCA4-201ENST00000344626 ZNF514Q96K75 400 aaPredicted RBP16.35■□□□□ 0.21
SMARCA4-201ENST00000344626 CARS2Q9HA77 564 aaKnown RBP16.35■□□□□ 0.21
SMARCA4-201ENST00000344626 EIF2B3Q9NR50 452 aaKnown RBP16.35■□□□□ 0.21
SMARCA4-201ENST00000344626 SNX15Q9NRS6 342 aa16.35■□□□□ 0.21
SMARCA4-201ENST00000344626 SCHIP1Q9P0W5 487 aaPredicted RBP16.35■□□□□ 0.21
SMARCA4-201ENST00000344626 TCRBV9S1A1TA0A576 114 aa16.35■□□□□ 0.21
SMARCA4-201ENST00000344626 OR10H2O60403 315 aa16.35■□□□□ 0.21
SMARCA4-201ENST00000344626 CD48P09326 243 aa16.35■□□□□ 0.21
SMARCA4-201ENST00000344626 CD72P21854 359 aa16.35■□□□□ 0.21
SMARCA4-201ENST00000344626 CSTF3Q12996 717 aaKnown RBP16.35■□□□□ 0.21
SMARCA4-201ENST00000344626 FRG1Q14331 258 aaKnown RBP16.35■□□□□ 0.21
SMARCA4-201ENST00000344626 SNX30Q5VWJ9 437 aa16.35■□□□□ 0.21
SMARCA4-201ENST00000344626 KIAA0408Q6ZU52 694 aa16.35■□□□□ 0.21
SMARCA4-201ENST00000344626 CHSY3Q70JA7 882 aa16.35■□□□□ 0.21
SMARCA4-201ENST00000344626 KYQ8NBH2 561 aa16.35■□□□□ 0.21
SMARCA4-201ENST00000344626 AIF1LQ9BQI0 150 aa16.35■□□□□ 0.21
SMARCA4-201ENST00000344626 ANKRD65E5RJM6 399 aa16.35■□□□□ 0.21
SMARCA4-201ENST00000344626 IFI35P80217 286 aaPredicted RBP16.35■□□□□ 0.21
SMARCA4-201ENST00000344626 PRKG2Q13237 762 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms