RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 PLSCR1O15162 318 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 LCMT2O60294 686 aaKnown RBP3.76□□□□□ -1.81
SYNE2-202ENST00000344113 USP12O75317 370 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 NDST3O95803 873 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 ME2P23368 584 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 GLDCP23378 1020 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 GCLMP48507 274 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 ZSWIM7Q19AV6 140 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 INO80DQ53TQ3 878 aaPredicted RBP3.76□□□□□ -1.81
SYNE2-202ENST00000344113 DPP9Q86TI2 863 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 KCTD14Q9BQ13 255 aaPredicted RBP3.76□□□□□ -1.81
SYNE2-202ENST00000344113 ST3GAL5Q9UNP4 418 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 LRRC72A6NJI9 287 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 RAD17O75943 681 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 CABYRO75952 493 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 HLA-EP13747 358 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 DEFA5Q01523 94 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 TRIM28Q13263 835 aaKnown RBP3.76□□□□□ -1.81
SYNE2-202ENST00000344113 CDK10Q15131 360 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 SKIV2LQ15477 1246 aaKnown RBP3.76□□□□□ -1.81
SYNE2-202ENST00000344113 CDO1Q16878 200 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 CYB5R4Q7L1T6 521 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 PCDH19Q8TAB3 1148 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 ZNF436Q9C0F3 470 aaPredicted RBP3.76□□□□□ -1.81
SYNE2-202ENST00000344113 MRPL44Q9H9J2 332 aaKnown RBP3.76□□□□□ -1.81
SYNE2-202ENST00000344113 POLR1BQ9H9Y6 1135 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 PIDD1Q9HB75 910 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 ASNSD1Q9NWL6 643 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 GLTPQ9NZD2 209 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 DNAJC13O75165 2243 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 CRB1P82279 1406 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 DNAJB6O75190 326 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 RAB3BP20337 219 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 MAKP20794 623 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 PSMA1P25786 263 aaKnown RBP3.76□□□□□ -1.81
SYNE2-202ENST00000344113 SLC5A2P31639 672 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 MLLT3P42568 568 aaPredicted RBP3.76□□□□□ -1.81
SYNE2-202ENST00000344113 SLC1A4P43007 532 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 CHAF1BQ13112 559 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 ATF7IP2Q5U623 682 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 FAM47BQ8NA70 645 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 SLC45A3Q96JT2 553 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 KLHL5Q96PQ7 755 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 SLC6A16Q9GZN6 736 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 LDAHQ9H6V9 325 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 RCOR3Q9P2K3 495 aaPredicted RBP3.76□□□□□ -1.81
SYNE2-202ENST00000344113 TULP3O75386 442 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 UGT2B4P06133 528 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 GJB1P08034 283 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 CYP2C8P10632 490 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 HOXA6P31267 233 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 SEPHS1P49903 392 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 ERVK-21P61565 698 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 ARF6P62330 175 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 BAIAP2L2Q6UXY1 529 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 SYNPOQ8N3V7 929 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 JPH3Q8WXH2 748 aaPredicted RBP3.76□□□□□ -1.81
SYNE2-202ENST00000344113 NLNQ9BYT8 704 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 MAN2B2Q9Y2E5 1009 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 SCN8AQ9UQD0 1980 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 AGAP14A8MT82 685 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 hCG_1984214I3L0E3 225 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 DDX39AO00148 427 aaKnown RBP3.76□□□□□ -1.81
SYNE2-202ENST00000344113 B4GALT4O60513 344 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 DDAH1O94760 285 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 CDK1P06493 297 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 EPHA4P54764 986 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 DMP1Q13316 513 aaPredicted RBP3.76□□□□□ -1.81
SYNE2-202ENST00000344113 PTPRRQ15256 657 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 AP5B1Q2VPB7 878 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 C1orf52Q8N6N3 182 aaKnown RBP3.76□□□□□ -1.81
SYNE2-202ENST00000344113 ARFGAP1Q8N6T3 406 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 HCAR2Q8TDS4 363 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 ECHDC3Q96DC8 303 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 CPXM1Q96SM3 734 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 CLMPQ9H6B4 373 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 IKZF3Q9UKT9 509 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 CHKBQ9Y259 395 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 NME7Q9Y5B8 376 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 A6NJY4 79 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 EIF1AYO14602 144 aaKnown RBP3.76□□□□□ -1.81
SYNE2-202ENST00000344113 SERPINF1P36955 418 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 EIF1AXP47813 144 aaKnown RBP3.76□□□□□ -1.81
SYNE2-202ENST00000344113 SACM1LQ9NTJ5 587 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 SHOC2Q9UQ13 582 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 FAM221BA6H8Z2 402 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 EDF1O60869 148 aaKnown RBP3.76□□□□□ -1.81
SYNE2-202ENST00000344113 CDK14O94921 469 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 ATP2B4P23634 1241 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 DHPSP49366 369 aaPredicted RBP3.76□□□□□ -1.81
SYNE2-202ENST00000344113 POLA2Q14181 598 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 PUM1Q14671 1186 aaKnown RBP eCLIP3.76□□□□□ -1.81
SYNE2-202ENST00000344113 FASTKD5Q7L8L6 764 aaKnown RBP3.76□□□□□ -1.81
SYNE2-202ENST00000344113 RNF145Q96MT1 663 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 PSMB7Q99436 277 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 ELF4Q99607 663 aaPredicted RBP3.76□□□□□ -1.81
SYNE2-202ENST00000344113 SARS2Q9NP81 518 aaKnown RBP3.76□□□□□ -1.81
SYNE2-202ENST00000344113 FLVCR2Q9UPI3 526 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 MED24O75448 989 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 GSTM1P09488 218 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms