RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 PCDHGC3Q9UN70 934 aa17.61■□□□□ 0.41
SMAD4-201ENST00000342988 WASF2Q9Y6W5 498 aa17.61■□□□□ 0.41
SMAD4-201ENST00000342988 ARPC2O15144 300 aa17.6■□□□□ 0.41
SMAD4-201ENST00000342988 SCGB1D2O95969 90 aa17.6■□□□□ 0.41
SMAD4-201ENST00000342988 CYP4B1P13584 511 aa17.6■□□□□ 0.41
SMAD4-201ENST00000342988 TUBG1P23258 451 aa17.6■□□□□ 0.41
SMAD4-201ENST00000342988 GALK1P51570 392 aa17.6■□□□□ 0.41
SMAD4-201ENST00000342988 TLE3Q04726 772 aa17.6■□□□□ 0.41
SMAD4-201ENST00000342988 PPP1R15BQ5SWA1 713 aa17.6■□□□□ 0.41
SMAD4-201ENST00000342988 TULP3O75386 442 aa17.6■□□□□ 0.41
SMAD4-201ENST00000342988 PGLSO95336 258 aa17.6■□□□□ 0.41
SMAD4-201ENST00000342988 CRISP1P54107 249 aa17.6■□□□□ 0.41
SMAD4-201ENST00000342988 RNASE12Q5GAN4 147 aaKnown RBP17.6■□□□□ 0.41
SMAD4-201ENST00000342988 C3orf33Q6P1S2 294 aa17.6■□□□□ 0.41
SMAD4-201ENST00000342988 SYNPOQ8N3V7 929 aa17.6■□□□□ 0.41
SMAD4-201ENST00000342988 SUN3Q8TAQ9 357 aa17.6■□□□□ 0.41
SMAD4-201ENST00000342988 ABCG4Q9H172 646 aa17.6■□□□□ 0.41
SMAD4-201ENST00000342988 PRPF19Q9UMS4 504 aaKnown RBP17.6■□□□□ 0.41
SMAD4-201ENST00000342988 HYKKA2RU49 373 aa17.6■□□□□ 0.41
SMAD4-201ENST00000342988 HGFP14210 728 aa17.6■□□□□ 0.41
SMAD4-201ENST00000342988 EPCAMP16422 314 aa17.6■□□□□ 0.41
SMAD4-201ENST00000342988 RPL22P35268 128 aaKnown RBP17.6■□□□□ 0.41
SMAD4-201ENST00000342988 PRKG2Q13237 762 aa17.6■□□□□ 0.41
SMAD4-201ENST00000342988 ESPL1Q14674 2120 aa17.6■□□□□ 0.41
SMAD4-201ENST00000342988 RRP1BQ14684 758 aaKnown RBP17.6■□□□□ 0.41
SMAD4-201ENST00000342988 NECTIN1Q15223 517 aa17.6■□□□□ 0.41
SMAD4-201ENST00000342988 ZNF484Q5JVG2 852 aa17.6■□□□□ 0.41
SMAD4-201ENST00000342988 KLHDC7AQ5VTJ3 777 aa17.6■□□□□ 0.41
SMAD4-201ENST00000342988 CRELD2Q6UXH1 353 aaPredicted RBP17.6■□□□□ 0.41
SMAD4-201ENST00000342988 ZYG11AQ6WRX3 759 aa17.6■□□□□ 0.41
SMAD4-201ENST00000342988 USP43Q70EL4 1123 aa17.6■□□□□ 0.41
SMAD4-201ENST00000342988 HTR3CQ8WXA8 447 aa17.6■□□□□ 0.41
SMAD4-201ENST00000342988 TBC1D10AQ9BXI6 508 aa17.6■□□□□ 0.41
SMAD4-201ENST00000342988 ACOT1Q86TX2 421 aa17.6■□□□□ 0.41
SMAD4-201ENST00000342988 CHST13Q8NET6 341 aa17.6■□□□□ 0.41
SMAD4-201ENST00000342988 TPK1Q9H3S4 243 aa17.6■□□□□ 0.41
SMAD4-201ENST00000342988 RAB27AP51159 221 aa17.6■□□□□ 0.41
SMAD4-201ENST00000342988 NDUFA9Q16795 377 aa17.6■□□□□ 0.41
SMAD4-201ENST00000342988 PRMT6Q96LA8 375 aaPredicted RBP17.6■□□□□ 0.41
SMAD4-201ENST00000342988 TCF12Q99081 682 aa17.6■□□□□ 0.41
SMAD4-201ENST00000342988 MROH8Q9H579 483 aa17.6■□□□□ 0.41
SMAD4-201ENST00000342988 ADAM28Q9UKQ2 775 aa17.6■□□□□ 0.41
SMAD4-201ENST00000342988 KNTC1P50748 2209 aa17.6■□□□□ 0.41
SMAD4-201ENST00000342988 RXRBP28702 533 aa17.6■□□□□ 0.41
SMAD4-201ENST00000342988 PTDSS1P48651 473 aaKnown RBP17.6■□□□□ 0.41
SMAD4-201ENST00000342988 CPT1CQ8TCG5 803 aa17.6■□□□□ 0.41
SMAD4-201ENST00000342988 EHD4Q9H223 541 aa17.6■□□□□ 0.41
SMAD4-201ENST00000342988 CDHR5Q9HBB8 845 aa17.6■□□□□ 0.41
SMAD4-201ENST00000342988 NAALADL1Q9UQQ1 740 aa17.6■□□□□ 0.41
SMAD4-201ENST00000342988 BCAS1O75363 584 aaPredicted RBP17.6■□□□□ 0.41
SMAD4-201ENST00000342988 ALDH2P05091 517 aa17.6■□□□□ 0.41
SMAD4-201ENST00000342988 CARTPTQ16568 116 aa17.6■□□□□ 0.41
SMAD4-201ENST00000342988 GPRIN3Q6ZVF9 776 aa17.6■□□□□ 0.41
SMAD4-201ENST00000342988 PCSK9Q8NBP7 692 aaKnown RBP17.6■□□□□ 0.41
SMAD4-201ENST00000342988 RDH11Q8TC12 318 aa17.6■□□□□ 0.41
SMAD4-201ENST00000342988 B3GNT4Q9C0J1 378 aa17.6■□□□□ 0.41
SMAD4-201ENST00000342988 RP1L1Q8IWN7 2480 aaPredicted RBP17.6■□□□□ 0.41
SMAD4-201ENST00000342988 SHANK2Q9UPX8 1470 aa17.6■□□□□ 0.41
SMAD4-201ENST00000342988 C1QTNF3-AMACRE9PGA6 284 aa17.59■□□□□ 0.41
SMAD4-201ENST00000342988 ACSL1P33121 698 aa17.59■□□□□ 0.41
SMAD4-201ENST00000342988 TIE1P35590 1138 aa17.59■□□□□ 0.41
SMAD4-201ENST00000342988 GDI2P50395 445 aaKnown RBP17.59■□□□□ 0.41
SMAD4-201ENST00000342988 TMC7Q7Z402 723 aa17.59■□□□□ 0.41
SMAD4-201ENST00000342988 MARCH10Q8NA82 808 aaPredicted RBP17.59■□□□□ 0.41
SMAD4-201ENST00000342988 THAP2Q9H0W7 228 aa17.59■□□□□ 0.41
SMAD4-201ENST00000342988 COLEC10Q9Y6Z7 277 aa17.59■□□□□ 0.41
SMAD4-201ENST00000342988 RPTORQ8N122 1335 aa17.59■□□□□ 0.41
SMAD4-201ENST00000342988 CYP3A7-CYP3A51PA0A087WV96 503 aa17.59■□□□□ 0.41
SMAD4-201ENST00000342988 CIB4A0PJX0 185 aa17.59■□□□□ 0.41
SMAD4-201ENST00000342988 H3BQF6 201 aa17.59■□□□□ 0.41
SMAD4-201ENST00000342988 LTA4HP09960 611 aaKnown RBP17.59■□□□□ 0.41
SMAD4-201ENST00000342988 CYP3A7P24462 503 aa17.59■□□□□ 0.41
SMAD4-201ENST00000342988 DNAAF1Q8NEP3 725 aa17.59■□□□□ 0.41
SMAD4-201ENST00000342988 DNASE1L2Q92874 299 aa17.59■□□□□ 0.41
SMAD4-201ENST00000342988 LRRC46Q96FV0 321 aa17.59■□□□□ 0.41
SMAD4-201ENST00000342988 ZFP14Q9HCL3 533 aa17.59■□□□□ 0.41
SMAD4-201ENST00000342988 HIF3AQ9Y2N7 669 aa17.59■□□□□ 0.41
SMAD4-201ENST00000342988 F8A1P23610 371 aa17.59■□□□□ 0.41
SMAD4-201ENST00000342988 CD40LGP29965 261 aa17.59■□□□□ 0.41
SMAD4-201ENST00000342988 ZNF226Q9NYT6 803 aa17.59■□□□□ 0.41
SMAD4-201ENST00000342988 PCDHA11Q9Y5I1 949 aa17.59■□□□□ 0.41
SMAD4-201ENST00000342988 DDX3YO15523 660 aaKnown RBP17.59■□□□□ 0.41
SMAD4-201ENST00000342988 RASGRP1O95267 797 aa17.59■□□□□ 0.41
SMAD4-201ENST00000342988 ZNF268Q14587 947 aaPredicted RBP17.59■□□□□ 0.41
SMAD4-201ENST00000342988 DENND1CQ8IV53 801 aa17.59■□□□□ 0.41
SMAD4-201ENST00000342988 BBS1Q8NFJ9 593 aa17.59■□□□□ 0.41
SMAD4-201ENST00000342988 FCGR1BQ92637 280 aa17.59■□□□□ 0.41
SMAD4-201ENST00000342988 LYARQ9NX58 379 aaKnown RBP17.59■□□□□ 0.41
SMAD4-201ENST00000342988 GPSM3Q9Y4H4 160 aa17.59■□□□□ 0.41
SMAD4-201ENST00000342988 TRPV2Q9Y5S1 764 aa17.59■□□□□ 0.41
SMAD4-201ENST00000342988 KCNE2Q9Y6J6 123 aa17.59■□□□□ 0.41
SMAD4-201ENST00000342988 PSMD9O00233 223 aa17.59■□□□□ 0.41
SMAD4-201ENST00000342988 KLHL22Q53GT1 634 aa17.59■□□□□ 0.41
SMAD4-201ENST00000342988 C14orf105Q9NVL8 296 aa17.59■□□□□ 0.41
SMAD4-201ENST00000342988 CFAP97Q9P2B7 532 aa17.59■□□□□ 0.41
SMAD4-201ENST00000342988 ANXA3P12429 323 aa17.59■□□□□ 0.41
SMAD4-201ENST00000342988 FOLH1Q04609 750 aa17.59■□□□□ 0.41
SMAD4-201ENST00000342988 PABPC1LQ4VXU2 614 aaKnown RBP17.59■□□□□ 0.41
SMAD4-201ENST00000342988 CES5AQ6NT32 575 aa17.59■□□□□ 0.41
SMAD4-201ENST00000342988 POU5F2Q8N7G0 328 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms