RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 CORO1AP31146 461 aaKnown RBP20.07■□□□□ 0.8
SPG7-202ENST00000341316 INHBCP55103 352 aa20.07■□□□□ 0.8
SPG7-202ENST00000341316 LSAMPQ13449 338 aa20.07■□□□□ 0.8
SPG7-202ENST00000341316 ART3Q13508 389 aa20.07■□□□□ 0.8
SPG7-202ENST00000341316 PTPRRQ15256 657 aa20.07■□□□□ 0.8
SPG7-202ENST00000341316 CYTH1Q15438 398 aa20.07■□□□□ 0.8
SPG7-202ENST00000341316 SETMARQ53H47 684 aaPredicted RBP20.07■□□□□ 0.8
SPG7-202ENST00000341316 MARVELD2Q8N4S9 558 aa20.07■□□□□ 0.8
SPG7-202ENST00000341316 OR4K2Q8NGD2 314 aa20.07■□□□□ 0.8
SPG7-202ENST00000341316 MRPL9Q9BYD2 267 aaKnown RBP20.07■□□□□ 0.8
SPG7-202ENST00000341316 NLE1Q9NVX2 485 aaPredicted RBP20.07■□□□□ 0.8
SPG7-202ENST00000341316 ATP6AP2A0A1C7CYW4 349 aa20.06■□□□□ 0.8
SPG7-202ENST00000341316 KLHL33A6NCF5 533 aa20.06■□□□□ 0.8
SPG7-202ENST00000341316 UBXN8O00124 270 aa20.06■□□□□ 0.8
SPG7-202ENST00000341316 DENRO43583 198 aaKnown RBP20.06■□□□□ 0.8
SPG7-202ENST00000341316 DNAJA2O60884 412 aa20.06■□□□□ 0.8
SPG7-202ENST00000341316 ATP6AP2O75787 350 aa20.06■□□□□ 0.8
SPG7-202ENST00000341316 CDKN1CP49918 316 aaPredicted RBP20.06■□□□□ 0.8
SPG7-202ENST00000341316 RPS6KA3P51812 740 aa20.06■□□□□ 0.8
SPG7-202ENST00000341316 HERVK_113P63132 956 aa20.06■□□□□ 0.8
SPG7-202ENST00000341316 NFKB2Q00653 900 aa20.06■□□□□ 0.8
SPG7-202ENST00000341316 MTA1Q13330 715 aa20.06■□□□□ 0.8
SPG7-202ENST00000341316 LAMB3Q13751 1172 aa20.06■□□□□ 0.8
SPG7-202ENST00000341316 TYSND1Q2T9J0 566 aa20.06■□□□□ 0.8
SPG7-202ENST00000341316 HECTD3Q5T447 861 aa20.06■□□□□ 0.8
SPG7-202ENST00000341316 RMDN1Q96DB5 314 aa20.06■□□□□ 0.8
SPG7-202ENST00000341316 TMA16Q96EY4 203 aaKnown RBP20.06■□□□□ 0.8
SPG7-202ENST00000341316 C3orf30Q96M34 536 aa20.06■□□□□ 0.8
SPG7-202ENST00000341316 LRGUKQ96M69 825 aa20.06■□□□□ 0.8
SPG7-202ENST00000341316 CDK5RAP1Q96SZ6 601 aaKnown RBP20.06■□□□□ 0.8
SPG7-202ENST00000341316 ERVK-6Q9BXR3 956 aa20.06■□□□□ 0.8
SPG7-202ENST00000341316 UBAP1Q9NZ09 502 aa20.06■□□□□ 0.8
SPG7-202ENST00000341316 IKZF3Q9UKT9 509 aa20.06■□□□□ 0.8
SPG7-202ENST00000341316 RIMKLBQ9ULI2 386 aa20.06■□□□□ 0.8
SPG7-202ENST00000341316 INSIG1O15503 277 aa20.06■□□□□ 0.8
SPG7-202ENST00000341316 IRF1P10914 325 aa20.06■□□□□ 0.8
SPG7-202ENST00000341316 OGNP20774 298 aaKnown RBP20.06■□□□□ 0.8
SPG7-202ENST00000341316 SH3BP2P78314 561 aa20.06■□□□□ 0.8
SPG7-202ENST00000341316 ADGRE1Q14246 886 aa20.06■□□□□ 0.8
SPG7-202ENST00000341316 UGT3A2Q3SY77 523 aa20.06■□□□□ 0.8
SPG7-202ENST00000341316 C16orf59Q7L2K0 433 aa20.06■□□□□ 0.8
SPG7-202ENST00000341316 PTGR2Q8N8N7 351 aaPredicted RBP20.06■□□□□ 0.8
SPG7-202ENST00000341316 FBRSL1Q9HCM7 1045 aaKnown RBP20.06■□□□□ 0.8
SPG7-202ENST00000341316 TRPC7Q9HCX4 862 aa20.06■□□□□ 0.8
SPG7-202ENST00000341316 PCDHGB4Q9UN71 923 aa20.06■□□□□ 0.8
SPG7-202ENST00000341316 PCDHGC4Q9Y5F7 938 aa20.06■□□□□ 0.8
SPG7-202ENST00000341316 PCDHGB5Q9Y5G0 923 aa20.06■□□□□ 0.8
SPG7-202ENST00000341316 SCN5AQ14524 2016 aa20.05■□□□□ 0.8
SPG7-202ENST00000341316 SMIM31A0A1B0GVY4 71 aa20.05■□□□□ 0.8
SPG7-202ENST00000341316 CBX4O00257 560 aa20.05■□□□□ 0.8
SPG7-202ENST00000341316 UBDO15205 165 aa20.05■□□□□ 0.8
SPG7-202ENST00000341316 PENKP01210 267 aaPredicted RBP20.05■□□□□ 0.8
SPG7-202ENST00000341316 F11P03951 625 aa20.05■□□□□ 0.8
SPG7-202ENST00000341316 ATXN3P54252 364 aaPredicted RBP20.05■□□□□ 0.8
SPG7-202ENST00000341316 CCL23P55773 120 aa20.05■□□□□ 0.8
SPG7-202ENST00000341316 RFTN1Q14699 578 aaPredicted RBP20.05■□□□□ 0.8
SPG7-202ENST00000341316 RARS2Q5T160 578 aaKnown RBP20.05■□□□□ 0.8
SPG7-202ENST00000341316 SPATA24Q86W54 205 aa20.05■□□□□ 0.8
SPG7-202ENST00000341316 BBS5Q8N3I7 341 aa20.05■□□□□ 0.8
SPG7-202ENST00000341316 CYP2S1Q96SQ9 504 aa20.05■□□□□ 0.8
SPG7-202ENST00000341316 CLSTN3Q9BQT9 956 aa20.05■□□□□ 0.8
SPG7-202ENST00000341316 COPS7BQ9H9Q2 264 aaPredicted RBP20.05■□□□□ 0.8
SPG7-202ENST00000341316 RIMS3Q9UJD0 308 aa20.05■□□□□ 0.8
SPG7-202ENST00000341316 AGO1Q9UL18 857 aaKnown RBP20.05■□□□□ 0.8
SPG7-202ENST00000341316 A0A0U1RQS6 177 aa20.05■□□□□ 0.8
SPG7-202ENST00000341316 UBA6A0AVT1 1052 aaPredicted RBP20.05■□□□□ 0.8
SPG7-202ENST00000341316 C2orf78A6NCI8 922 aa20.05■□□□□ 0.8
SPG7-202ENST00000341316 FBP2O00757 339 aa20.05■□□□□ 0.8
SPG7-202ENST00000341316 SCAMP3O14828 347 aaKnown RBP20.05■□□□□ 0.8
SPG7-202ENST00000341316 HOXA2O43364 376 aa20.05■□□□□ 0.8
SPG7-202ENST00000341316 CLDN11O75508 207 aa20.05■□□□□ 0.8
SPG7-202ENST00000341316 RHOCP08134 193 aa20.05■□□□□ 0.8
SPG7-202ENST00000341316 SPATA31D3P0C874 917 aa20.05■□□□□ 0.8
SPG7-202ENST00000341316 FMO4P31512 558 aa20.05■□□□□ 0.8
SPG7-202ENST00000341316 TUFMP49411 452 aaKnown RBP20.05■□□□□ 0.8
SPG7-202ENST00000341316 PTK2BQ14289 1009 aa20.05■□□□□ 0.8
SPG7-202ENST00000341316 SPATA31D4Q6ZUB0 917 aa20.05■□□□□ 0.8
SPG7-202ENST00000341316 GLT6D1Q7Z4J2 308 aa20.05■□□□□ 0.8
SPG7-202ENST00000341316 FAM156AQ8NDB6 213 aa20.05■□□□□ 0.8
SPG7-202ENST00000341316 BHLHE22Q8NFJ8 381 aaPredicted RBP20.05■□□□□ 0.8
SPG7-202ENST00000341316 LPGAT1Q92604 370 aa20.05■□□□□ 0.8
SPG7-202ENST00000341316 NSUN5Q96P11 429 aaKnown RBP20.05■□□□□ 0.8
SPG7-202ENST00000341316 ATOH8Q96SQ7 321 aa20.05■□□□□ 0.8
SPG7-202ENST00000341316 TRMOQ9BU70 441 aa20.05■□□□□ 0.8
SPG7-202ENST00000341316 TDRD1Q9BXT4 1180 aaKnown RBP20.05■□□□□ 0.8
SPG7-202ENST00000341316 CCDC167Q9P0B6 97 aa20.05■□□□□ 0.8
SPG7-202ENST00000341316 FAM50BQ9Y247 325 aa20.05■□□□□ 0.8
SPG7-202ENST00000341316 PTGDR2Q9Y5Y4 395 aa20.05■□□□□ 0.8
SPG7-202ENST00000341316 PITPNM1O00562 1244 aa20.04■□□□□ 0.8
SPG7-202ENST00000341316 PQBP1O60828 265 aaKnown RBP20.04■□□□□ 0.8
SPG7-202ENST00000341316 CRTAMO95727 393 aa20.04■□□□□ 0.8
SPG7-202ENST00000341316 PDAP1Q13442 181 aaKnown RBP20.04■□□□□ 0.8
SPG7-202ENST00000341316 FASTKQ14296 549 aaKnown RBP20.04■□□□□ 0.8
SPG7-202ENST00000341316 SQLEQ14534 574 aa20.04■□□□□ 0.8
SPG7-202ENST00000341316 PFKFB4Q16877 469 aa20.04■□□□□ 0.8
SPG7-202ENST00000341316 USP41Q3LFD5 358 aa20.04■□□□□ 0.8
SPG7-202ENST00000341316 AGKQ53H12 422 aa20.04■□□□□ 0.8
SPG7-202ENST00000341316 PAQR3Q6TCH7 311 aa20.04■□□□□ 0.8
SPG7-202ENST00000341316 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.04■□□□□ 0.82e-7■■■□□ 15.2
SPG7-202ENST00000341316 LARP4Q71RC2 724 aaKnown RBP eCLIP20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms