RNA–Protein interactions for RNA: ENST00000340384.4

TUBB4B-201, Transcript of tubulin beta 4B class IVb, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB4B, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-201ENST00000340384 GLT6D1Q7Z4J2 308 aa15.18■□□□□ 0.02
TUBB4B-201ENST00000340384 KIAA0907Q7Z7F0 614 aaPredicted RBP15.18■□□□□ 0.02
TUBB4B-201ENST00000340384 MFN1Q8IWA4 741 aa15.18■□□□□ 0.02
TUBB4B-201ENST00000340384 SFTPA1Q8IWL2 248 aa15.18■□□□□ 0.02
TUBB4B-201ENST00000340384 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.18■□□□□ 0.028e-8■□□□□ 9.4
TUBB4B-201ENST00000340384 ACVR1CQ8NER5 493 aa15.18■□□□□ 0.02
TUBB4B-201ENST00000340384 KCTD4Q8WVF5 259 aa15.18■□□□□ 0.02
TUBB4B-201ENST00000340384 ACDQ96AP0 544 aa15.18■□□□□ 0.02
TUBB4B-201ENST00000340384 NSL1Q96IY1 281 aa15.18■□□□□ 0.02
TUBB4B-201ENST00000340384 OMDQ99983 421 aa15.18■□□□□ 0.02
TUBB4B-201ENST00000340384 FEM1AQ9BSK4 669 aa15.18■□□□□ 0.02
TUBB4B-201ENST00000340384 INTS10Q9NVR2 710 aaKnown RBP15.18■□□□□ 0.02
TUBB4B-201ENST00000340384 NLE1Q9NVX2 485 aaPredicted RBP15.18■□□□□ 0.02
TUBB4B-201ENST00000340384 RAI2Q9Y5P3 530 aa15.18■□□□□ 0.02
TUBB4B-201ENST00000340384 MUC3AQ02505 3323 aa15.18■□□□□ 0.02
TUBB4B-201ENST00000340384 TCF20Q9UGU0 1960 aaKnown RBP15.18■□□□□ 0.02
TUBB4B-201ENST00000340384 CXorf51AA0A1B0GTR3 108 aa15.17■□□□□ 0.02
TUBB4B-201ENST00000340384 FCHO1O14526 889 aa15.17■□□□□ 0.02
TUBB4B-201ENST00000340384 TULP3O75386 442 aa15.17■□□□□ 0.02
TUBB4B-201ENST00000340384 ADH1CP00326 375 aa15.17■□□□□ 0.02
TUBB4B-201ENST00000340384 CYBBP04839 570 aa15.17■□□□□ 0.02
TUBB4B-201ENST00000340384 RBP1P09455 135 aa15.17■□□□□ 0.02
TUBB4B-201ENST00000340384 ALOX15P16050 662 aaPredicted RBP15.17■□□□□ 0.02
TUBB4B-201ENST00000340384 CALB2P22676 271 aa15.17■□□□□ 0.02
TUBB4B-201ENST00000340384 PTPN4P29074 926 aa15.17■□□□□ 0.02
TUBB4B-201ENST00000340384 RHOAP61586 193 aa15.17■□□□□ 0.02
TUBB4B-201ENST00000340384 AP1S1P61966 158 aa15.17■□□□□ 0.02
TUBB4B-201ENST00000340384 ELF3P78545 371 aaPredicted RBP15.17■□□□□ 0.02
TUBB4B-201ENST00000340384 ARF5P84085 180 aa15.17■□□□□ 0.02
TUBB4B-201ENST00000340384 LMAN2Q12907 356 aa15.17■□□□□ 0.02
TUBB4B-201ENST00000340384 ITPRIPL2Q3MIP1 535 aa15.17■□□□□ 0.02
TUBB4B-201ENST00000340384 HECTD2Q5U5R9 776 aa15.17■□□□□ 0.02
TUBB4B-201ENST00000340384 CES4AQ5XG92 561 aa15.17■□□□□ 0.02
TUBB4B-201ENST00000340384 TMEM215Q68D42 235 aa15.17■□□□□ 0.02
TUBB4B-201ENST00000340384 TXNDC11Q6PKC3 985 aa15.17■□□□□ 0.02
TUBB4B-201ENST00000340384 CEP97Q8IW35 865 aa15.17■□□□□ 0.02
TUBB4B-201ENST00000340384 PARP9Q8IXQ6 854 aa15.17■□□□□ 0.02
TUBB4B-201ENST00000340384 APCDD1Q8J025 514 aa15.17■□□□□ 0.02
TUBB4B-201ENST00000340384 CENPLQ8N0S6 344 aaPredicted RBP15.17■□□□□ 0.02
TUBB4B-201ENST00000340384 FSTL5Q8N475 847 aaPredicted RBP15.17■□□□□ 0.02
TUBB4B-201ENST00000340384 OR4L1Q8NH43 312 aa15.17■□□□□ 0.02
TUBB4B-201ENST00000340384 NECAB3Q96P71 396 aaPredicted RBP15.17■□□□□ 0.02
TUBB4B-201ENST00000340384 TCF12Q99081 682 aa15.17■□□□□ 0.02
TUBB4B-201ENST00000340384 POPDC3Q9HBV1 291 aa15.17■□□□□ 0.02
TUBB4B-201ENST00000340384 HEBP1Q9NRV9 189 aa15.17■□□□□ 0.02
TUBB4B-201ENST00000340384 MARCOQ9UEW3 520 aaPredicted RBP15.17■□□□□ 0.02
TUBB4B-201ENST00000340384 HAO1Q9UJM8 370 aa15.17■□□□□ 0.02
TUBB4B-201ENST00000340384 VWA7Q9Y334 891 aa15.17■□□□□ 0.02
TUBB4B-201ENST00000340384 SLCO1B7G3V0H7 640 aa15.17■□□□□ 0.02
TUBB4B-201ENST00000340384 ITM2AO43736 263 aa15.17■□□□□ 0.02
TUBB4B-201ENST00000340384 ZMPSTE24O75844 475 aa15.17■□□□□ 0.02
TUBB4B-201ENST00000340384 S1PR4O95977 384 aa15.17■□□□□ 0.02
TUBB4B-201ENST00000340384 GOT2P00505 430 aaKnown RBP15.17■□□□□ 0.02
TUBB4B-201ENST00000340384 SERPINA6P08185 405 aa15.17■□□□□ 0.02
TUBB4B-201ENST00000340384 F7P08709 466 aaPredicted RBP15.17■□□□□ 0.02
TUBB4B-201ENST00000340384 LTA4HP09960 611 aaKnown RBP15.17■□□□□ 0.02
TUBB4B-201ENST00000340384 PMLP29590 882 aa15.17■□□□□ 0.02
TUBB4B-201ENST00000340384 NCEH1Q6PIU2 408 aa15.17■□□□□ 0.02
TUBB4B-201ENST00000340384 RNF135Q8IUD6 432 aa15.17■□□□□ 0.02
TUBB4B-201ENST00000340384 KIRREL3Q8IZU9 778 aa15.17■□□□□ 0.02
TUBB4B-201ENST00000340384 CPA6Q8N4T0 437 aa15.17■□□□□ 0.02
TUBB4B-201ENST00000340384 PDCD6IPQ8WUM4 868 aaKnown RBP15.17■□□□□ 0.02
TUBB4B-201ENST00000340384 DNAJC1Q96KC8 554 aaKnown RBP15.17■□□□□ 0.02
TUBB4B-201ENST00000340384 TBATAQ96M53 351 aa15.17■□□□□ 0.02
TUBB4B-201ENST00000340384 C20orf27Q9GZN8 174 aa15.17■□□□□ 0.02
TUBB4B-201ENST00000340384 DRC3Q9H069 523 aa15.17■□□□□ 0.02
TUBB4B-201ENST00000340384 ILKAPQ9H0C8 392 aaPredicted RBP15.17■□□□□ 0.02
TUBB4B-201ENST00000340384 GPAMQ9HCL2 828 aa15.17■□□□□ 0.02
TUBB4B-201ENST00000340384 SLC2A4RGQ9NR83 387 aa15.17■□□□□ 0.02
TUBB4B-201ENST00000340384 ABCB8Q9NUT2 735 aa15.17■□□□□ 0.02
TUBB4B-201ENST00000340384 KIAA1522Q9P206 1035 aaPredicted RBP15.17■□□□□ 0.02
TUBB4B-201ENST00000340384 CPSF2Q9P2I0 782 aaKnown RBP15.17■□□□□ 0.02
TUBB4B-201ENST00000340384 ARL5AQ9Y689 179 aa15.17■□□□□ 0.02
TUBB4B-201ENST00000340384 ANKRD36A6QL64 1941 aa15.16■□□□□ 0.02
TUBB4B-201ENST00000340384 TICRRQ7Z2Z1 1910 aa15.16■□□□□ 0.02
TUBB4B-201ENST00000340384 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.16■□□□□ 0.02
TUBB4B-201ENST00000340384 CCDC162PA2VCL2 907 aa15.16■□□□□ 0.02
TUBB4B-201ENST00000340384 MGRN1O60291 552 aa15.16■□□□□ 0.02
TUBB4B-201ENST00000340384 LYPLA1O75608 230 aaPredicted RBP15.16■□□□□ 0.02
TUBB4B-201ENST00000340384 GJB3O75712 270 aa15.16■□□□□ 0.02
TUBB4B-201ENST00000340384 ESRRAP11474 423 aaPredicted RBP15.16■□□□□ 0.02
TUBB4B-201ENST00000340384 SRFP11831 508 aa15.16■□□□□ 0.02
TUBB4B-201ENST00000340384 LPOP22079 712 aaPredicted RBP15.16■□□□□ 0.02
TUBB4B-201ENST00000340384 PSMA3P25788 255 aa15.16■□□□□ 0.02
TUBB4B-201ENST00000340384 CSKP41240 450 aa15.16■□□□□ 0.02
TUBB4B-201ENST00000340384 RGRP47804 291 aa15.16■□□□□ 0.02
TUBB4B-201ENST00000340384 ARSDP51689 593 aa15.16■□□□□ 0.02
TUBB4B-201ENST00000340384 ZNF140P52738 457 aaPredicted RBP15.16■□□□□ 0.02
TUBB4B-201ENST00000340384 SLC20A2Q08357 652 aa15.16■□□□□ 0.02
TUBB4B-201ENST00000340384 RIPK1Q13546 671 aa15.16■□□□□ 0.02
TUBB4B-201ENST00000340384 RCN2Q14257 317 aa15.16■□□□□ 0.02
TUBB4B-201ENST00000340384 ACAP2Q15057 778 aa15.16■□□□□ 0.02
TUBB4B-201ENST00000340384 SNCBQ16143 134 aa15.16■□□□□ 0.02
TUBB4B-201ENST00000340384 GEN1Q17RS7 908 aa15.16■□□□□ 0.02
TUBB4B-201ENST00000340384 ADIPOR2Q86V24 386 aa15.16■□□□□ 0.02
TUBB4B-201ENST00000340384 PACS2Q86VP3 889 aa15.16■□□□□ 0.02
TUBB4B-201ENST00000340384 ZNF557Q8N988 423 aaPredicted RBP15.16■□□□□ 0.02
TUBB4B-201ENST00000340384 LPCAT1Q8NF37 534 aa15.16■□□□□ 0.02
TUBB4B-201ENST00000340384 STON2Q8WXE9 905 aa15.16■□□□□ 0.02
TUBB4B-201ENST00000340384 EZH1Q92800 747 aaPredicted RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms