RNA–Protein interactions for RNA: ENST00000339901.8

SECISBP2-201, Transcript of SECIS binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene SECISBP2, Length 3,320 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SECISBP2-201ENST00000339901 BNIP2Q12982 314 aa13.41□□□□□ -0.26
SECISBP2-201ENST00000339901 MRPL58Q14197 206 aaKnown RBP13.41□□□□□ -0.26
SECISBP2-201ENST00000339901 SETMARQ53H47 684 aaPredicted RBP13.41□□□□□ -0.26
SECISBP2-201ENST00000339901 INTS11Q5TA45 600 aaKnown RBP13.41□□□□□ -0.26
SECISBP2-201ENST00000339901 CCSAPQ6IQ19 270 aaPredicted RBP13.41□□□□□ -0.26
SECISBP2-201ENST00000339901 LCN8Q6JVE9 175 aa13.41□□□□□ -0.26
SECISBP2-201ENST00000339901 IYDQ6PHW0 289 aa13.41□□□□□ -0.26
SECISBP2-201ENST00000339901 ZNF280BQ86YH2 543 aa13.41□□□□□ -0.26
SECISBP2-201ENST00000339901 RASAL3Q86YV0 1011 aa13.41□□□□□ -0.26
SECISBP2-201ENST00000339901 OR4L1Q8NH43 312 aa13.41□□□□□ -0.26
SECISBP2-201ENST00000339901 GRIP2Q9C0E4 1043 aa13.41□□□□□ -0.26
SECISBP2-201ENST00000339901 SEMA6AQ9H2E6 1030 aa13.41□□□□□ -0.26
SECISBP2-201ENST00000339901 SPC25Q9HBM1 224 aa13.41□□□□□ -0.26
SECISBP2-201ENST00000339901 CATSPERZQ9NTU4 200 aa13.41□□□□□ -0.26
SECISBP2-201ENST00000339901 COMMD8Q9NX08 183 aa13.41□□□□□ -0.26
SECISBP2-201ENST00000339901 DUS2Q9NX74 493 aaKnown RBP13.41□□□□□ -0.26
SECISBP2-201ENST00000339901 ETAA1Q9NY74 926 aa13.41□□□□□ -0.26
SECISBP2-201ENST00000339901 PCDHB5Q9Y5E4 795 aa13.41□□□□□ -0.26
SECISBP2-201ENST00000339901 PIP5K1BO14986 540 aa13.41□□□□□ -0.26
SECISBP2-201ENST00000339901 KLK8O60259 260 aa13.41□□□□□ -0.26
SECISBP2-201ENST00000339901 TRPA1O75762 1119 aa13.41□□□□□ -0.26
SECISBP2-201ENST00000339901 H6PDO95479 791 aa13.41□□□□□ -0.26
SECISBP2-201ENST00000339901 ASLP04424 464 aa13.41□□□□□ -0.26
SECISBP2-201ENST00000339901 ZNF23P17027 643 aa13.41□□□□□ -0.26
SECISBP2-201ENST00000339901 ATP6V1B2P21281 511 aa13.41□□□□□ -0.26
SECISBP2-201ENST00000339901 EFEMP1Q12805 493 aa13.41□□□□□ -0.26
SECISBP2-201ENST00000339901 SDHAF4Q5VUM1 108 aa13.41□□□□□ -0.26
SECISBP2-201ENST00000339901 RAP1GAP2Q684P5 730 aa13.41□□□□□ -0.26
SECISBP2-201ENST00000339901 HAUS8Q9BT25 410 aa13.41□□□□□ -0.26
SECISBP2-201ENST00000339901 OLAHQ9NV23 265 aa13.41□□□□□ -0.26
SECISBP2-201ENST00000339901 NLE1Q9NVX2 485 aaPredicted RBP13.41□□□□□ -0.26
SECISBP2-201ENST00000339901 MED16Q9Y2X0 877 aa13.41□□□□□ -0.26
SECISBP2-201ENST00000339901 SNX13Q9Y5W8 968 aa13.41□□□□□ -0.26
SECISBP2-201ENST00000339901 ATP6AP2A0A1C7CYW4 349 aa13.41□□□□□ -0.26
SECISBP2-201ENST00000339901 H3BNH8 94 aa13.41□□□□□ -0.26
SECISBP2-201ENST00000339901 UBXN8O00124 270 aa13.41□□□□□ -0.26
SECISBP2-201ENST00000339901 SYN3O14994 580 aa13.41□□□□□ -0.26
SECISBP2-201ENST00000339901 HTRA2O43464 458 aaPredicted RBP13.41□□□□□ -0.26
SECISBP2-201ENST00000339901 ATP6AP2O75787 350 aa13.41□□□□□ -0.26
SECISBP2-201ENST00000339901 SPATA31D3P0C874 917 aa13.41□□□□□ -0.26
SECISBP2-201ENST00000339901 TSPAN8P19075 237 aa13.41□□□□□ -0.26
SECISBP2-201ENST00000339901 CAPN3P20807 821 aa13.41□□□□□ -0.26
SECISBP2-201ENST00000339901 CD9P21926 228 aa13.41□□□□□ -0.26
SECISBP2-201ENST00000339901 ZNF140P52738 457 aaPredicted RBP13.41□□□□□ -0.26
SECISBP2-201ENST00000339901 FOXA1P55317 472 aa13.41□□□□□ -0.26
SECISBP2-201ENST00000339901 TUBA4AP68366 448 aa13.41□□□□□ -0.26
SECISBP2-201ENST00000339901 NRF1Q16656 503 aa13.41□□□□□ -0.26
SECISBP2-201ENST00000339901 TMEM259Q4ZIN3 620 aa13.41□□□□□ -0.26
SECISBP2-201ENST00000339901 CST9Q5W186 159 aa13.41□□□□□ -0.26
SECISBP2-201ENST00000339901 SPATA31D4Q6ZUB0 917 aa13.41□□□□□ -0.26
SECISBP2-201ENST00000339901 KLHDC9Q8NEP7 349 aa13.41□□□□□ -0.26
SECISBP2-201ENST00000339901 NMD3Q96D46 503 aaKnown RBP13.41□□□□□ -0.26
SECISBP2-201ENST00000339901 MGME1Q9BQP7 344 aa13.41□□□□□ -0.26
SECISBP2-201ENST00000339901 MUC13Q9H3R2 512 aa13.41□□□□□ -0.26
SECISBP2-201ENST00000339901 MID1IP1Q9NPA3 183 aa13.41□□□□□ -0.26
SECISBP2-201ENST00000339901 PNPLA3Q9NST1 481 aa13.41□□□□□ -0.26
SECISBP2-201ENST00000339901 TMEM45AQ9NWC5 275 aa13.41□□□□□ -0.26
SECISBP2-201ENST00000339901 CEPT1Q9Y6K0 416 aa13.41□□□□□ -0.26
SECISBP2-201ENST00000339901 ARHGAP10A1A4S6 786 aa13.4□□□□□ -0.26
SECISBP2-201ENST00000339901 LCHNA4D1U4 455 aa13.4□□□□□ -0.26
SECISBP2-201ENST00000339901 TRIM64CA6NLI5 447 aa13.4□□□□□ -0.26
SECISBP2-201ENST00000339901 HNRNPRO43390 633 aaKnown RBP13.4□□□□□ -0.26
SECISBP2-201ENST00000339901 GRK4P32298 578 aa13.4□□□□□ -0.26
SECISBP2-201ENST00000339901 ACVRL1P37023 503 aa13.4□□□□□ -0.26
SECISBP2-201ENST00000339901 CDH13P55290 713 aa13.4□□□□□ -0.26
SECISBP2-201ENST00000339901 FAM189BP81408 668 aa13.4□□□□□ -0.26
SECISBP2-201ENST00000339901 PRKCQQ04759 706 aa13.4□□□□□ -0.26
SECISBP2-201ENST00000339901 GRB7Q14451 532 aa13.4□□□□□ -0.26
SECISBP2-201ENST00000339901 FAM219BQ5XKK7 198 aa13.4□□□□□ -0.26
SECISBP2-201ENST00000339901 BLOC1S3Q6QNY0 202 aa13.4□□□□□ -0.26
SECISBP2-201ENST00000339901 SLC15A3Q8IY34 581 aa13.4□□□□□ -0.26
SECISBP2-201ENST00000339901 TFAP2CQ92754 450 aa13.4□□□□□ -0.26
SECISBP2-201ENST00000339901 MPP4Q96JB8 637 aa13.4□□□□□ -0.26
SECISBP2-201ENST00000339901 SLC45A3Q96JT2 553 aa13.4□□□□□ -0.26
SECISBP2-201ENST00000339901 TCF12Q99081 682 aa13.4□□□□□ -0.26
SECISBP2-201ENST00000339901 TRIM15Q9C019 465 aa13.4□□□□□ -0.26
SECISBP2-201ENST00000339901 NOL11Q9H8H0 719 aaKnown RBP13.4□□□□□ -0.26
SECISBP2-201ENST00000339901 SYTL2Q9HCH5 934 aa13.4□□□□□ -0.26
SECISBP2-201ENST00000339901 ACTR3BQ9P1U1 418 aa13.4□□□□□ -0.26
SECISBP2-201ENST00000339901 PCDHA9Q9Y5H5 950 aa13.4□□□□□ -0.26
SECISBP2-201ENST00000339901 PPP6CO00743 305 aa13.4□□□□□ -0.26
SECISBP2-201ENST00000339901 GJB3O75712 270 aa13.4□□□□□ -0.26
SECISBP2-201ENST00000339901 CSPG5O95196 566 aa13.4□□□□□ -0.26
SECISBP2-201ENST00000339901 RPS17P08708 135 aaKnown RBP13.4□□□□□ -0.26
SECISBP2-201ENST00000339901 IDO1P14902 403 aa13.4□□□□□ -0.26
SECISBP2-201ENST00000339901 LBPP18428 481 aa13.4□□□□□ -0.26
SECISBP2-201ENST00000339901 LCP2Q13094 533 aa13.4□□□□□ -0.26
SECISBP2-201ENST00000339901 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.4□□□□□ -0.26
SECISBP2-201ENST00000339901 CLLU1OSQ5K130 101 aa13.4□□□□□ -0.26
SECISBP2-201ENST00000339901 NADSYN1Q6IA69 706 aa13.4□□□□□ -0.26
SECISBP2-201ENST00000339901 CYP2R1Q6VVX0 501 aa13.4□□□□□ -0.26
SECISBP2-201ENST00000339901 SPATA19Q7Z5L4 167 aa13.4□□□□□ -0.26
SECISBP2-201ENST00000339901 RTN4RL1Q86UN2 441 aaPredicted RBP13.4□□□□□ -0.26
SECISBP2-201ENST00000339901 SNX31Q8N9S9 440 aa13.4□□□□□ -0.26
SECISBP2-201ENST00000339901 TSPAN14Q8NG11 270 aa13.4□□□□□ -0.26
SECISBP2-201ENST00000339901 STAG3L4Q8TBR4 150 aa13.4□□□□□ -0.26
SECISBP2-201ENST00000339901 HM13Q8TCT9 377 aa13.4□□□□□ -0.26
SECISBP2-201ENST00000339901 CANT1Q8WVQ1 401 aa13.4□□□□□ -0.26
SECISBP2-201ENST00000339901 LRCH3Q96II8 777 aa13.4□□□□□ -0.26
SECISBP2-201ENST00000339901 SPATA17Q96L03 361 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms