RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 POU4F1Q01851 419 aa13.72□□□□□ -0.21
SYNE3-201ENST00000334258 KYAT1Q16773 422 aa13.72□□□□□ -0.21
SYNE3-201ENST00000334258 IMPG1Q17R60 797 aa13.72□□□□□ -0.21
SYNE3-201ENST00000334258 CELF3Q5SZQ8 465 aaKnown RBP13.72□□□□□ -0.21
SYNE3-201ENST00000334258 CRTC3Q6UUV7 619 aa13.72□□□□□ -0.21
SYNE3-201ENST00000334258 LARP4Q71RC2 724 aaKnown RBP eCLIP13.72□□□□□ -0.21
SYNE3-201ENST00000334258 PIWIL3Q7Z3Z3 882 aaKnown RBP13.72□□□□□ -0.21
SYNE3-201ENST00000334258 BTLAQ7Z6A9 289 aa13.72□□□□□ -0.21
SYNE3-201ENST00000334258 LRRC58Q96CX6 371 aa13.72□□□□□ -0.21
SYNE3-201ENST00000334258 ZIC5Q96T25 663 aa13.72□□□□□ -0.21
SYNE3-201ENST00000334258 TBL1YQ9BQ87 522 aa13.72□□□□□ -0.21
SYNE3-201ENST00000334258 EIF2AQ9BY44 585 aaKnown RBP13.72□□□□□ -0.21
SYNE3-201ENST00000334258 TPK1Q9H3S4 243 aa13.72□□□□□ -0.21
SYNE3-201ENST00000334258 CDH23Q9H251 3354 aa13.71□□□□□ -0.21
SYNE3-201ENST00000334258 BBIP1A8MTZ0 92 aa13.71□□□□□ -0.21
SYNE3-201ENST00000334258 CLDN25C9JDP6 229 aa13.71□□□□□ -0.21
SYNE3-201ENST00000334258 DAB1O75553 588 aa13.71□□□□□ -0.21
SYNE3-201ENST00000334258 CRCPO75575 148 aa13.71□□□□□ -0.21
SYNE3-201ENST00000334258 GPIP06744 558 aa13.71□□□□□ -0.21
SYNE3-201ENST00000334258 GPX3P22352 226 aa13.71□□□□□ -0.21
SYNE3-201ENST00000334258 BDNFP23560 247 aa13.71□□□□□ -0.21
SYNE3-201ENST00000334258 SLC6A2P23975 617 aa13.71□□□□□ -0.21
SYNE3-201ENST00000334258 MLLT10P55197 1068 aa13.71□□□□□ -0.21
SYNE3-201ENST00000334258 TECRLQ5HYJ1 363 aa13.71□□□□□ -0.21
SYNE3-201ENST00000334258 CST9Q5W186 159 aa13.71□□□□□ -0.21
SYNE3-201ENST00000334258 LCN8Q6JVE9 175 aa13.71□□□□□ -0.21
SYNE3-201ENST00000334258 STK32CQ86UX6 486 aa13.71□□□□□ -0.21
SYNE3-201ENST00000334258 IFNLR1Q8IU57 520 aaPredicted RBP13.71□□□□□ -0.21
SYNE3-201ENST00000334258 ABHD11Q8NFV4 315 aa13.71□□□□□ -0.21
SYNE3-201ENST00000334258 NPY6RQ99463 290 aa13.71□□□□□ -0.21
SYNE3-201ENST00000334258 TUBA1CQ9BQE3 449 aa13.71□□□□□ -0.21
SYNE3-201ENST00000334258 NANOGQ9H9S0 305 aa13.71□□□□□ -0.21
SYNE3-201ENST00000334258 IGSF5Q9NSI5 407 aa13.71□□□□□ -0.21
SYNE3-201ENST00000334258 H3BMM5 538 aa13.71□□□□□ -0.22
SYNE3-201ENST00000334258 UBFD1O14562 309 aaKnown RBP13.71□□□□□ -0.22
SYNE3-201ENST00000334258 STAU1O95793 577 aaKnown RBP13.71□□□□□ -0.22
SYNE3-201ENST00000334258 SLC4A1P02730 911 aa13.71□□□□□ -0.22
SYNE3-201ENST00000334258 PCNAP12004 261 aa13.71□□□□□ -0.22
SYNE3-201ENST00000334258 SCNN1AP37088 669 aa13.71□□□□□ -0.22
SYNE3-201ENST00000334258 GALNT2Q10471 571 aa13.71□□□□□ -0.22
SYNE3-201ENST00000334258 POLD3Q15054 466 aaPredicted RBP13.71□□□□□ -0.22
SYNE3-201ENST00000334258 PCSK7Q16549 785 aa13.71□□□□□ -0.22
SYNE3-201ENST00000334258 CCL14Q16627 93 aa13.71□□□□□ -0.22
SYNE3-201ENST00000334258 LDLRAD1Q5T700 205 aa13.71□□□□□ -0.22
SYNE3-201ENST00000334258 FRA10AC1Q70Z53 315 aa13.71□□□□□ -0.22
SYNE3-201ENST00000334258 SPRED1Q7Z699 444 aa13.71□□□□□ -0.22
SYNE3-201ENST00000334258 VPS33AQ96AX1 596 aa13.71□□□□□ -0.22
SYNE3-201ENST00000334258 VAT1Q99536 393 aa13.71□□□□□ -0.22
SYNE3-201ENST00000334258 BDH2Q9BUT1 245 aa13.71□□□□□ -0.22
SYNE3-201ENST00000334258 ALG2Q9H553 416 aa13.71□□□□□ -0.22
SYNE3-201ENST00000334258 MID1IP1Q9NPA3 183 aa13.71□□□□□ -0.22
SYNE3-201ENST00000334258 AAR2Q9Y312 384 aaKnown RBP13.71□□□□□ -0.22
SYNE3-201ENST00000334258 CPQQ9Y646 472 aa13.71□□□□□ -0.22
SYNE3-201ENST00000334258 HGFP14210 728 aa13.7□□□□□ -0.22
SYNE3-201ENST00000334258 TKTP29401 623 aaKnown RBP13.7□□□□□ -0.22
SYNE3-201ENST00000334258 GSK3BP49841 420 aa13.7□□□□□ -0.22
SYNE3-201ENST00000334258 LIPEQ05469 1076 aa13.7□□□□□ -0.22
SYNE3-201ENST00000334258 PIGFQ07326 219 aa13.7□□□□□ -0.22
SYNE3-201ENST00000334258 GRSF1Q12849 480 aaKnown RBP eCLIP13.7□□□□□ -0.22
SYNE3-201ENST00000334258 GRB7Q14451 532 aa13.7□□□□□ -0.22
SYNE3-201ENST00000334258 PGS1Q32NB8 556 aa13.7□□□□□ -0.22
SYNE3-201ENST00000334258 ARL13BQ3SXY8 428 aa13.7□□□□□ -0.22
SYNE3-201ENST00000334258 ZNF789Q5FWF6 425 aa13.7□□□□□ -0.22
SYNE3-201ENST00000334258 OTUD1Q5VV17 481 aaPredicted RBP13.7□□□□□ -0.22
SYNE3-201ENST00000334258 SLC22A9Q8IVM8 553 aa13.7□□□□□ -0.22
SYNE3-201ENST00000334258 TBC1D21Q8IYX1 336 aa13.7□□□□□ -0.22
SYNE3-201ENST00000334258 PNPT1Q8TCS8 783 aaKnown RBP13.7□□□□□ -0.22
SYNE3-201ENST00000334258 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.7□□□□□ -0.222e-6■■■■■ 54.9
SYNE3-201ENST00000334258 OLFM1Q99784 485 aa13.7□□□□□ -0.22
SYNE3-201ENST00000334258 HERC2P3Q9BVR0 1158 aa13.7□□□□□ -0.22
SYNE3-201ENST00000334258 CHID1Q9BWS9 393 aa13.7□□□□□ -0.22
SYNE3-201ENST00000334258 SIK2Q9H0K1 926 aa13.7□□□□□ -0.22
SYNE3-201ENST00000334258 FAM124BQ9H5Z6 455 aaPredicted RBP13.7□□□□□ -0.22
SYNE3-201ENST00000334258 HMG20AQ9NP66 347 aa13.7□□□□□ -0.22
SYNE3-201ENST00000334258 BTRCQ9Y297 605 aa13.7□□□□□ -0.22
SYNE3-201ENST00000334258 RAD54BQ9Y620 910 aa13.7□□□□□ -0.22
SYNE3-201ENST00000334258 TRIM64A6NGJ6 449 aa13.7□□□□□ -0.22
SYNE3-201ENST00000334258 PTGES3LE9PB15 166 aa13.7□□□□□ -0.22
SYNE3-201ENST00000334258 GMNNO75496 209 aa13.7□□□□□ -0.22
SYNE3-201ENST00000334258 HSD17B1P14061 328 aa13.7□□□□□ -0.22
SYNE3-201ENST00000334258 DNAJB1P25685 340 aa13.7□□□□□ -0.22
SYNE3-201ENST00000334258 IDUAP35475 653 aa13.7□□□□□ -0.22
SYNE3-201ENST00000334258 CSRP3P50461 194 aa13.7□□□□□ -0.22
SYNE3-201ENST00000334258 ZNF157P51786 506 aaPredicted RBP13.7□□□□□ -0.22
SYNE3-201ENST00000334258 TKTL1P51854 596 aa13.7□□□□□ -0.22
SYNE3-201ENST00000334258 HABP4Q5JVS0 413 aaKnown RBP13.7□□□□□ -0.22
SYNE3-201ENST00000334258 CLYBLQ8N0X4 340 aa13.7□□□□□ -0.22
SYNE3-201ENST00000334258 SMG8Q8ND04 991 aaKnown RBP13.7□□□□□ -0.22
SYNE3-201ENST00000334258 OR6P1Q8NGX9 317 aa13.7□□□□□ -0.22
SYNE3-201ENST00000334258 SGCDQ92629 289 aa13.7□□□□□ -0.22
SYNE3-201ENST00000334258 YTHDF1Q9BYJ9 559 aaKnown RBP13.7□□□□□ -0.22
SYNE3-201ENST00000334258 SLC7A5P2Q9GIP4 190 aa13.7□□□□□ -0.22
SYNE3-201ENST00000334258 KIAA1522Q9P206 1035 aaPredicted RBP13.7□□□□□ -0.22
SYNE3-201ENST00000334258 OR12D3Q9UGF7 316 aa13.7□□□□□ -0.22
SYNE3-201ENST00000334258 ZBBXA8MT70 800 aa13.7□□□□□ -0.22
SYNE3-201ENST00000334258 C22orf31O95567 290 aa13.7□□□□□ -0.22
SYNE3-201ENST00000334258 LINC00032P0C843 101 aa13.7□□□□□ -0.22
SYNE3-201ENST00000334258 IL7RP16871 459 aa13.7□□□□□ -0.22
SYNE3-201ENST00000334258 APLP1P51693 650 aa13.7□□□□□ -0.22
SYNE3-201ENST00000334258 DNASE1L3Q13609 305 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms