RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 FUT11Q495W5 492 aa15.86■□□□□ 0.13
PDGFB-201ENST00000331163 KLC3Q6P597 504 aa15.86■□□□□ 0.13
PDGFB-201ENST00000331163 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.86■□□□□ 0.13
PDGFB-201ENST00000331163 CDHR3Q6ZTQ4 885 aa15.86■□□□□ 0.13
PDGFB-201ENST00000331163 NUDT18Q6ZVK8 323 aa15.86■□□□□ 0.13
PDGFB-201ENST00000331163 Q6ZVL8 140 aa15.86■□□□□ 0.13
PDGFB-201ENST00000331163 OTOAQ7RTW8 1153 aa15.86■□□□□ 0.13
PDGFB-201ENST00000331163 C2orf73Q8N5S3 287 aaPredicted RBP15.86■□□□□ 0.13
PDGFB-201ENST00000331163 OVCA2Q8WZ82 227 aa15.86■□□□□ 0.13
PDGFB-201ENST00000331163 IMP4Q96G21 291 aaKnown RBP15.86■□□□□ 0.13
PDGFB-201ENST00000331163 PSKH2Q96QS6 385 aa15.86■□□□□ 0.13
PDGFB-201ENST00000331163 SLC6A17Q9H1V8 727 aa15.86■□□□□ 0.13
PDGFB-201ENST00000331163 HEBP1Q9NRV9 189 aa15.86■□□□□ 0.13
PDGFB-201ENST00000331163 ARL8BQ9NVJ2 186 aa15.86■□□□□ 0.13
PDGFB-201ENST00000331163 ANGPTL3Q9Y5C1 460 aa15.86■□□□□ 0.13
PDGFB-201ENST00000331163 T-ENOLP0DO92 83 aa15.85■□□□□ 0.13
PDGFB-201ENST00000331163 TAS2R39P59534 338 aa15.85■□□□□ 0.13
PDGFB-201ENST00000331163 TSTD2Q5T7W7 516 aa15.85■□□□□ 0.13
PDGFB-201ENST00000331163 ASTLQ6HA08 431 aaPredicted RBP15.85■□□□□ 0.13
PDGFB-201ENST00000331163 SDE2Q6IQ49 451 aa15.85■□□□□ 0.13
PDGFB-201ENST00000331163 C12orf40Q86WS4 652 aa15.85■□□□□ 0.13
PDGFB-201ENST00000331163 LRRC49Q8IUZ0 686 aa15.85■□□□□ 0.13
PDGFB-201ENST00000331163 GRAMD1AQ96CP6 724 aa15.85■□□□□ 0.13
PDGFB-201ENST00000331163 MTF2Q9Y483 593 aaPredicted RBP15.85■□□□□ 0.13
PDGFB-201ENST00000331163 COL6A3P12111 3177 aa15.85■□□□□ 0.13
PDGFB-201ENST00000331163 TRBV23OR9-2A0A075B6M9 112 aa15.85■□□□□ 0.13
PDGFB-201ENST00000331163 FGF1P05230 155 aa15.85■□□□□ 0.13
PDGFB-201ENST00000331163 NAGLUP54802 743 aa15.85■□□□□ 0.13
PDGFB-201ENST00000331163 C22orf39Q6P5X5 142 aa15.85■□□□□ 0.13
PDGFB-201ENST00000331163 POTEHQ6S545 545 aa15.85■□□□□ 0.13
PDGFB-201ENST00000331163 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.85■□□□□ 0.13
PDGFB-201ENST00000331163 NXNL1Q96CM4 212 aa15.85■□□□□ 0.13
PDGFB-201ENST00000331163 LRRC39Q96DD0 335 aa15.85■□□□□ 0.13
PDGFB-201ENST00000331163 MYADMQ96S97 322 aa15.85■□□□□ 0.13
PDGFB-201ENST00000331163 TSSK1BQ9BXA7 367 aa15.85■□□□□ 0.13
PDGFB-201ENST00000331163 MANSC1Q9H8J5 431 aa15.85■□□□□ 0.13
PDGFB-201ENST00000331163 VPS45Q9NRW7 570 aa15.85■□□□□ 0.13
PDGFB-201ENST00000331163 RP1L1Q8IWN7 2480 aaPredicted RBP15.85■□□□□ 0.13
PDGFB-201ENST00000331163 FAM92AA1XBS5 289 aa15.85■□□□□ 0.13
PDGFB-201ENST00000331163 OTOL1A6NHN0 477 aaPredicted RBP15.85■□□□□ 0.13
PDGFB-201ENST00000331163 ATP5HO75947 161 aa15.85■□□□□ 0.13
PDGFB-201ENST00000331163 SRCP12931 536 aa15.85■□□□□ 0.13
PDGFB-201ENST00000331163 SERPINB3P29508 390 aa15.85■□□□□ 0.13
PDGFB-201ENST00000331163 UBE3AQ05086 875 aa15.85■□□□□ 0.13
PDGFB-201ENST00000331163 PDCD2Q16342 344 aaPredicted RBP15.85■□□□□ 0.13
PDGFB-201ENST00000331163 UGP2Q16851 508 aa15.85■□□□□ 0.13
PDGFB-201ENST00000331163 CRTC3Q6UUV7 619 aa15.85■□□□□ 0.13
PDGFB-201ENST00000331163 TSGA13Q96PP4 275 aa15.85■□□□□ 0.13
PDGFB-201ENST00000331163 TMEM109Q9BVC6 243 aa15.85■□□□□ 0.13
PDGFB-201ENST00000331163 ELOVL2Q9NXB9 296 aa15.85■□□□□ 0.13
PDGFB-201ENST00000331163 PPARGC1AQ9UBK2 798 aaKnown RBP15.85■□□□□ 0.13
PDGFB-201ENST00000331163 GRID1Q9ULK0 1009 aa15.85■□□□□ 0.13
PDGFB-201ENST00000331163 CNOT1A5YKK6 2376 aaKnown RBP15.84■□□□□ 0.13
PDGFB-201ENST00000331163 NIPSNAP2O75323 286 aa15.84■□□□□ 0.13
PDGFB-201ENST00000331163 USP1O94782 785 aa15.84■□□□□ 0.13
PDGFB-201ENST00000331163 CYP17A1P05093 508 aa15.84■□□□□ 0.13
PDGFB-201ENST00000331163 HNRNPA1P09651 372 aaKnown RBP eCLIP15.84■□□□□ 0.13
PDGFB-201ENST00000331163 HLA-DPA1P20036 260 aa15.84■□□□□ 0.13
PDGFB-201ENST00000331163 HYAL1Q12794 435 aa15.84■□□□□ 0.13
PDGFB-201ENST00000331163 ACSBG2Q5FVE4 666 aa15.84■□□□□ 0.13
PDGFB-201ENST00000331163 MANEALQ5VSG8 457 aa15.84■□□□□ 0.13
PDGFB-201ENST00000331163 LRRC74BQ6ZQY2 392 aa15.84■□□□□ 0.13
PDGFB-201ENST00000331163 DCAF4L2Q8NA75 395 aa15.84■□□□□ 0.13
PDGFB-201ENST00000331163 ADAMTS19Q8TE59 1207 aa15.84■□□□□ 0.13
PDGFB-201ENST00000331163 DCAKDQ8WVC6 231 aa15.84■□□□□ 0.13
PDGFB-201ENST00000331163 WDR60Q8WVS4 1066 aa15.84■□□□□ 0.13
PDGFB-201ENST00000331163 EZH1Q92800 747 aaPredicted RBP15.84■□□□□ 0.13
PDGFB-201ENST00000331163 HBEGFQ99075 208 aa15.84■□□□□ 0.13
PDGFB-201ENST00000331163 CADM1Q9BY67 442 aaKnown RBP15.84■□□□□ 0.13
PDGFB-201ENST00000331163 POMKQ9H5K3 350 aa15.84■□□□□ 0.13
PDGFB-201ENST00000331163 SOX13Q9UN79 622 aa15.84■□□□□ 0.13
PDGFB-201ENST00000331163 CUL9Q8IWT3 2517 aa15.84■□□□□ 0.13
PDGFB-201ENST00000331163 DRGXA6NNA5 263 aa15.84■□□□□ 0.13
PDGFB-201ENST00000331163 LILRB3O75022 631 aa15.84■□□□□ 0.13
PDGFB-201ENST00000331163 ENO1P06733 434 aaKnown RBP15.84■□□□□ 0.13
PDGFB-201ENST00000331163 ITGALP20701 1170 aa15.84■□□□□ 0.13
PDGFB-201ENST00000331163 PTPN4P29074 926 aa15.84■□□□□ 0.13
PDGFB-201ENST00000331163 SERPINB9P50453 376 aa15.84■□□□□ 0.13
PDGFB-201ENST00000331163 NEK3P51956 506 aa15.84■□□□□ 0.13
PDGFB-201ENST00000331163 TRIM67Q6ZTA4 783 aa15.84■□□□□ 0.13
PDGFB-201ENST00000331163 TRAPPC5Q8IUR0 188 aa15.84■□□□□ 0.13
PDGFB-201ENST00000331163 ZNF513Q8N8E2 541 aaPredicted RBP15.84■□□□□ 0.13
PDGFB-201ENST00000331163 OR14C36Q8NHC7 312 aa15.84■□□□□ 0.13
PDGFB-201ENST00000331163 CALML6Q8TD86 181 aa15.84■□□□□ 0.13
PDGFB-201ENST00000331163 ZNF707Q96C28 371 aaPredicted RBP15.84■□□□□ 0.13
PDGFB-201ENST00000331163 RSPRY1Q96DX4 576 aa15.84■□□□□ 0.13
PDGFB-201ENST00000331163 CLPTM1LQ96KA5 538 aa15.84■□□□□ 0.13
PDGFB-201ENST00000331163 TMEM216Q9P0N5 145 aa15.84■□□□□ 0.13
PDGFB-201ENST00000331163 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.84■□□□□ 0.13
PDGFB-201ENST00000331163 VWA8A3KMH1 1905 aa15.84■□□□□ 0.13
PDGFB-201ENST00000331163 TBC1D3DA0A087WVF3 549 aa15.84■□□□□ 0.13
PDGFB-201ENST00000331163 TBC1D3IA0A087WXS9 549 aa15.84■□□□□ 0.13
PDGFB-201ENST00000331163 TBC1D3EA0A087X179 549 aa15.84■□□□□ 0.13
PDGFB-201ENST00000331163 TBC1D3KA0A087X1G2 549 aa15.84■□□□□ 0.13
PDGFB-201ENST00000331163 TBC1D3FA6NER0 549 aaPredicted RBP15.84■□□□□ 0.13
PDGFB-201ENST00000331163 TBC1D3LB9A6J9 549 aa15.84■□□□□ 0.13
PDGFB-201ENST00000331163 TBX10O75333 385 aa15.84■□□□□ 0.13
PDGFB-201ENST00000331163 ELFN1P0C7U0 828 aa15.84■□□□□ 0.13
PDGFB-201ENST00000331163 TBC1D3HP0C7X1 549 aa15.84■□□□□ 0.13
PDGFB-201ENST00000331163 HNRNPLP14866 589 aaKnown RBP eCLIP15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms