RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 GATAD2BQ8WXI9 593 aa7.9□□□□□ -1.15
CIITA-201ENST00000324288 MCMBPQ9BTE3 642 aa7.9□□□□□ -1.15
CIITA-201ENST00000324288 FAM126AQ9BYI3 521 aaPredicted RBP7.9□□□□□ -1.15
CIITA-201ENST00000324288 WDR55Q9H6Y2 383 aaPredicted RBP7.9□□□□□ -1.15
CIITA-201ENST00000324288 PNPLA8Q9NP80 782 aa7.9□□□□□ -1.15
CIITA-201ENST00000324288 UMODL1Q5DID0 1318 aa7.9□□□□□ -1.15
CIITA-201ENST00000324288 PDHXO00330 501 aa7.9□□□□□ -1.15
CIITA-201ENST00000324288 CPNE3O75131 537 aaKnown RBP7.9□□□□□ -1.15
CIITA-201ENST00000324288 SLC22A3O75751 556 aa7.9□□□□□ -1.15
CIITA-201ENST00000324288 ZNHIT3Q15649 155 aaPredicted RBP7.9□□□□□ -1.15
CIITA-201ENST00000324288 XRRA1Q6P2D8 792 aa7.9□□□□□ -1.15
CIITA-201ENST00000324288 UNC5AQ6ZN44 842 aa7.9□□□□□ -1.15
CIITA-201ENST00000324288 LRTOMTQ8WZ04 291 aa7.9□□□□□ -1.15
CIITA-201ENST00000324288 PGM2Q96G03 612 aa7.9□□□□□ -1.15
CIITA-201ENST00000324288 CORO1BQ9BR76 489 aa7.9□□□□□ -1.15
CIITA-201ENST00000324288 ACAT2Q9BWD1 397 aa7.9□□□□□ -1.15
CIITA-201ENST00000324288 NUP50Q9UKX7 468 aa7.9□□□□□ -1.15
CIITA-201ENST00000324288 ZNF232Q9UNY5 417 aa7.9□□□□□ -1.15
CIITA-201ENST00000324288 TIMM8BQ9Y5J9 83 aaPredicted RBP7.9□□□□□ -1.15
CIITA-201ENST00000324288 SUV39H1O43463 412 aa7.9□□□□□ -1.15
CIITA-201ENST00000324288 AVILO75366 819 aa7.9□□□□□ -1.15
CIITA-201ENST00000324288 LYNP07948 512 aa7.9□□□□□ -1.15
CIITA-201ENST00000324288 DLG1Q12959 904 aa7.9□□□□□ -1.15
CIITA-201ENST00000324288 RAP1GAP2Q684P5 730 aa7.9□□□□□ -1.15
CIITA-201ENST00000324288 ZNF285Q96NJ3 590 aa7.9□□□□□ -1.15
CIITA-201ENST00000324288 PLA2G12BQ9BX93 195 aa7.9□□□□□ -1.15
CIITA-201ENST00000324288 RAB23Q9ULC3 237 aa7.9□□□□□ -1.15
CIITA-201ENST00000324288 HES2Q9Y543 173 aa7.9□□□□□ -1.15
CIITA-201ENST00000324288 F8VP50 259 aa7.89□□□□□ -1.15
CIITA-201ENST00000324288 PLOD2O00469 737 aa7.89□□□□□ -1.15
CIITA-201ENST00000324288 ORC5O43913 435 aa7.89□□□□□ -1.15
CIITA-201ENST00000324288 MAXP61244 160 aa7.89□□□□□ -1.15
CIITA-201ENST00000324288 CD83Q01151 205 aa7.89□□□□□ -1.15
CIITA-201ENST00000324288 PQLC1Q8N2U9 271 aa7.89□□□□□ -1.15
CIITA-201ENST00000324288 NMUR2Q9GZQ4 415 aa7.89□□□□□ -1.15
CIITA-201ENST00000324288 MAGEB16A2A368 324 aa7.89□□□□□ -1.15
CIITA-201ENST00000324288 CTSKP43235 329 aa7.89□□□□□ -1.15
CIITA-201ENST00000324288 TIGD2Q4W5G0 525 aa7.89□□□□□ -1.15
CIITA-201ENST00000324288 TNFAIP8L1Q8WVP5 186 aa7.89□□□□□ -1.15
CIITA-201ENST00000324288 ARMC5Q96C12 935 aa7.89□□□□□ -1.15
CIITA-201ENST00000324288 C17orf75Q9HAS0 396 aa7.89□□□□□ -1.15
CIITA-201ENST00000324288 GPN1Q9HCN4 374 aaPredicted RBP7.89□□□□□ -1.15
CIITA-201ENST00000324288 BAZ2AQ9UIF9 1905 aaKnown RBP7.89□□□□□ -1.15
CIITA-201ENST00000324288 GPR75-ASB3A0A0A6YYF3 556 aa7.89□□□□□ -1.15
CIITA-201ENST00000324288 PAPSS1O43252 624 aaPredicted RBP7.89□□□□□ -1.15
CIITA-201ENST00000324288 NOBOXO60393 691 aa7.89□□□□□ -1.15
CIITA-201ENST00000324288 DNASE1L3Q13609 305 aa7.89□□□□□ -1.15
CIITA-201ENST00000324288 FAM183BPQ6ZVS7 135 aa7.89□□□□□ -1.15
CIITA-201ENST00000324288 IQCF5A8MTL0 148 aa7.89□□□□□ -1.15
CIITA-201ENST00000324288 ERAL1O75616 437 aaKnown RBP7.89□□□□□ -1.15
CIITA-201ENST00000324288 SREBF1P36956 1147 aa7.89□□□□□ -1.15
CIITA-201ENST00000324288 PSMD5Q16401 504 aa7.89□□□□□ -1.15
CIITA-201ENST00000324288 FBXO33Q7Z6M2 555 aa7.89□□□□□ -1.15
CIITA-201ENST00000324288 SETD6Q8TBK2 473 aa7.89□□□□□ -1.15
CIITA-201ENST00000324288 BAP1Q92560 729 aa7.89□□□□□ -1.15
CIITA-201ENST00000324288 FEM1AQ9BSK4 669 aa7.89□□□□□ -1.15
CIITA-201ENST00000324288 NCAM2O15394 837 aa7.89□□□□□ -1.15
CIITA-201ENST00000324288 GSC2O15499 205 aa7.89□□□□□ -1.15
CIITA-201ENST00000324288 IL1BP01584 269 aa7.89□□□□□ -1.15
CIITA-201ENST00000324288 RB1P06400 928 aa7.89□□□□□ -1.15
CIITA-201ENST00000324288 PAX3P23760 479 aa7.89□□□□□ -1.15
CIITA-201ENST00000324288 GRK5P34947 590 aa7.89□□□□□ -1.15
CIITA-201ENST00000324288 NR2C2P49116 596 aa7.89□□□□□ -1.15
CIITA-201ENST00000324288 BACE1P56817 501 aa7.89□□□□□ -1.15
CIITA-201ENST00000324288 IRF8Q02556 426 aa7.89□□□□□ -1.15
CIITA-201ENST00000324288 RNF38Q9H0F5 515 aa7.89□□□□□ -1.15
CIITA-201ENST00000324288 ALKBH4Q9NXW9 302 aa7.89□□□□□ -1.15
CIITA-201ENST00000324288 CDK9P50750 372 aaKnown RBP7.89□□□□□ -1.15
CIITA-201ENST00000324288 IDNKQ5T6J7 187 aa7.89□□□□□ -1.15
CIITA-201ENST00000324288 ARMC10Q8N2F6 343 aa7.89□□□□□ -1.15
CIITA-201ENST00000324288 ZNF606Q8WXB4 792 aa7.89□□□□□ -1.15
CIITA-201ENST00000324288 IRF2BPLQ9H1B7 796 aa7.89□□□□□ -1.15
CIITA-201ENST00000324288 MFHAS1Q9Y4C4 1052 aa7.89□□□□□ -1.15
CIITA-201ENST00000324288 DOCK11Q5JSL3 2073 aa7.89□□□□□ -1.15
CIITA-201ENST00000324288 PSKH1P11801 424 aa7.89□□□□□ -1.15
CIITA-201ENST00000324288 IL1R1P14778 569 aa7.89□□□□□ -1.15
CIITA-201ENST00000324288 VBP1P61758 197 aa7.89□□□□□ -1.15
CIITA-201ENST00000324288 PGM5Q15124 567 aa7.89□□□□□ -1.15
CIITA-201ENST00000324288 ADGRA1Q86SQ6 560 aa7.89□□□□□ -1.15
CIITA-201ENST00000324288 GALNT6Q8NCL4 622 aa7.89□□□□□ -1.15
CIITA-201ENST00000324288 F5P12259 2224 aa7.89□□□□□ -1.15
CIITA-201ENST00000324288 TKTP29401 623 aaKnown RBP7.89□□□□□ -1.15
CIITA-201ENST00000324288 CNTN2Q02246 1040 aa7.89□□□□□ -1.15
CIITA-201ENST00000324288 LIPEQ05469 1076 aa7.89□□□□□ -1.15
CIITA-201ENST00000324288 HSPBAP1Q96EW2 488 aa7.89□□□□□ -1.15
CIITA-201ENST00000324288 GAD1Q99259 594 aa7.89□□□□□ -1.15
CIITA-201ENST00000324288 TNFSF13BQ9Y275 285 aa7.89□□□□□ -1.15
CIITA-201ENST00000324288 ZW10O43264 779 aa7.89□□□□□ -1.15
CIITA-201ENST00000324288 NTSR2O95665 410 aa7.89□□□□□ -1.15
CIITA-201ENST00000324288 BPGMP07738 259 aa7.89□□□□□ -1.15
CIITA-201ENST00000324288 ANXA5P08758 320 aa7.89□□□□□ -1.15
CIITA-201ENST00000324288 ADORA2AP29274 412 aa7.89□□□□□ -1.15
CIITA-201ENST00000324288 TLX1P31314 330 aaPredicted RBP7.89□□□□□ -1.15
CIITA-201ENST00000324288 MAP1SQ66K74 1059 aaPredicted RBP7.89□□□□□ -1.15
CIITA-201ENST00000324288 ARRDC4Q8NCT1 418 aa7.89□□□□□ -1.15
CIITA-201ENST00000324288 TSEN15Q8WW01 171 aaKnown RBP7.89□□□□□ -1.15
CIITA-201ENST00000324288 OR52E6Q96RD3 313 aa7.89□□□□□ -1.15
CIITA-201ENST00000324288 SPAG4Q9NPE6 437 aa7.89□□□□□ -1.15
CIITA-201ENST00000324288 AASDHPPTQ9NRN7 309 aa7.89□□□□□ -1.15
CIITA-201ENST00000324288 COQ3Q9NZJ6 369 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms