RNA–Protein interactions for RNA: ENST00000316399.10

SOX6-201, Transcript of SRY-box 6, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SOX6, Length 8,808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-201ENST00000316399 FBXO6Q9NRD1 293 aaPredicted RBP7.21□□□□□ -1.25
SOX6-201ENST00000316399 DDX18Q9NVP1 670 aaKnown RBP7.21□□□□□ -1.25
SOX6-201ENST00000316399 TRAV19A0A0A6YYK7 116 aa7.21□□□□□ -1.25
SOX6-201ENST00000316399 SMIM22K7EJ46 135 aa7.21□□□□□ -1.25
SOX6-201ENST00000316399 SERPINA1P01009 418 aa7.21□□□□□ -1.25
SOX6-201ENST00000316399 FABP3P05413 133 aa7.21□□□□□ -1.25
SOX6-201ENST00000316399 CDH4P55283 916 aa7.21□□□□□ -1.25
SOX6-201ENST00000316399 SOX10P56693 466 aa7.21□□□□□ -1.25
SOX6-201ENST00000316399 IL10RBQ08334 325 aa7.21□□□□□ -1.25
SOX6-201ENST00000316399 SP140Q13342 867 aa7.21□□□□□ -1.25
SOX6-201ENST00000316399 SETMARQ53H47 684 aaPredicted RBP7.21□□□□□ -1.25
SOX6-201ENST00000316399 EPHX4Q8IUS5 362 aa7.21□□□□□ -1.25
SOX6-201ENST00000316399 ZNF540Q8NDQ6 660 aa7.21□□□□□ -1.25
SOX6-201ENST00000316399 HTATIP2Q9BUP3 242 aa7.21□□□□□ -1.25
SOX6-201ENST00000316399 FZD8Q9H461 694 aa7.21□□□□□ -1.25
SOX6-201ENST00000316399 SLCO1B3Q9NPD5 702 aa7.21□□□□□ -1.25
SOX6-201ENST00000316399 ZDHHC4Q9NPG8 344 aa7.21□□□□□ -1.25
SOX6-201ENST00000316399 MRPS33Q9Y291 106 aaKnown RBP7.21□□□□□ -1.25
SOX6-201ENST00000316399 GMEB1Q9Y692 573 aa7.21□□□□□ -1.25
SOX6-201ENST00000316399 FAM234BA2RU67 622 aa7.21□□□□□ -1.26
SOX6-201ENST00000316399 FAM159BA6NKW6 160 aa7.21□□□□□ -1.26
SOX6-201ENST00000316399 TISP43B9A030 160 aa7.21□□□□□ -1.26
SOX6-201ENST00000316399 IRF1P10914 325 aa7.21□□□□□ -1.26
SOX6-201ENST00000316399 HPGDP15428 266 aa7.21□□□□□ -1.26
SOX6-201ENST00000316399 ERFP50548 548 aa7.21□□□□□ -1.26
SOX6-201ENST00000316399 CNTN2Q02246 1040 aa7.21□□□□□ -1.26
SOX6-201ENST00000316399 TYSND1Q2T9J0 566 aa7.21□□□□□ -1.26
SOX6-201ENST00000316399 FAM171A1Q5VUB5 890 aa7.21□□□□□ -1.26
SOX6-201ENST00000316399 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.21□□□□□ -1.26
SOX6-201ENST00000316399 ZBTB2Q8N680 514 aa7.21□□□□□ -1.26
SOX6-201ENST00000316399 CFL2Q9Y281 166 aa7.21□□□□□ -1.26
SOX6-201ENST00000316399 TPH1P17752 444 aa7.21□□□□□ -1.26
SOX6-201ENST00000316399 ARF4P18085 180 aaPredicted RBP7.21□□□□□ -1.26
SOX6-201ENST00000316399 FAUP35544 74 aaKnown RBP7.21□□□□□ -1.26
SOX6-201ENST00000316399 AP3S2P59780 193 aa7.21□□□□□ -1.26
SOX6-201ENST00000316399 MAP2K5Q13163 448 aa7.21□□□□□ -1.26
SOX6-201ENST00000316399 PTPRNQ16849 979 aa7.21□□□□□ -1.26
SOX6-201ENST00000316399 MFSD4BQ5TF39 518 aa7.21□□□□□ -1.26
SOX6-201ENST00000316399 TUBA3EQ6PEY2 450 aa7.21□□□□□ -1.26
SOX6-201ENST00000316399 CPNE9Q8IYJ1 553 aa7.21□□□□□ -1.26
SOX6-201ENST00000316399 TRPV1Q8NER1 839 aa7.21□□□□□ -1.26
SOX6-201ENST00000316399 KCTD4Q8WVF5 259 aa7.21□□□□□ -1.26
SOX6-201ENST00000316399 THRSPQ92748 146 aa7.21□□□□□ -1.26
SOX6-201ENST00000316399 FCRL5Q96RD9 977 aa7.21□□□□□ -1.26
SOX6-201ENST00000316399 ZNF347Q96SE7 839 aa7.21□□□□□ -1.26
SOX6-201ENST00000316399 OSBPL7Q9BZF2 842 aa7.21□□□□□ -1.26
SOX6-201ENST00000316399 ALG2Q9H553 416 aa7.21□□□□□ -1.26
SOX6-201ENST00000316399 MIOSQ9NXC5 875 aa7.21□□□□□ -1.26
SOX6-201ENST00000316399 CST1P01037 141 aa7.21□□□□□ -1.26
SOX6-201ENST00000316399 PEPDP12955 493 aa7.21□□□□□ -1.26
SOX6-201ENST00000316399 SCN1BQ07699 218 aa7.21□□□□□ -1.26
SOX6-201ENST00000316399 BOP1Q14137 746 aaKnown RBP7.21□□□□□ -1.26
SOX6-201ENST00000316399 ADGRE1Q14246 886 aa7.21□□□□□ -1.26
SOX6-201ENST00000316399 ZNF513Q8N8E2 541 aaPredicted RBP7.21□□□□□ -1.26
SOX6-201ENST00000316399 KCTD15Q96SI1 283 aaPredicted RBP7.21□□□□□ -1.26
SOX6-201ENST00000316399 LRRC3Q9BY71 257 aa7.21□□□□□ -1.26
SOX6-201ENST00000316399 CHKBQ9Y259 395 aa7.21□□□□□ -1.26
SOX6-201ENST00000316399 A0A0J9YYE9 177 aa7.21□□□□□ -1.26
SOX6-201ENST00000316399 C1QTNF3-AMACRE9PGA6 284 aa7.21□□□□□ -1.26
SOX6-201ENST00000316399 IFNGP01579 166 aa7.21□□□□□ -1.26
SOX6-201ENST00000316399 C8GP07360 202 aa7.21□□□□□ -1.26
SOX6-201ENST00000316399 POU1F1P28069 291 aa7.21□□□□□ -1.26
SOX6-201ENST00000316399 NOS3P29474 1203 aa7.21□□□□□ -1.26
SOX6-201ENST00000316399 HERVK_113P63132 956 aa7.21□□□□□ -1.26
SOX6-201ENST00000316399 GSTCDQ8NEC7 633 aa7.21□□□□□ -1.26
SOX6-201ENST00000316399 RFKQ969G6 155 aa7.21□□□□□ -1.26
SOX6-201ENST00000316399 SKA1Q96BD8 255 aa7.21□□□□□ -1.26
SOX6-201ENST00000316399 HAPLN3Q96S86 360 aa7.21□□□□□ -1.26
SOX6-201ENST00000316399 ERVK-6Q9BXR3 956 aa7.21□□□□□ -1.26
SOX6-201ENST00000316399 BCO2Q9BYV7 579 aa7.21□□□□□ -1.26
SOX6-201ENST00000316399 OSBPL2Q9H1P3 480 aa7.21□□□□□ -1.26
SOX6-201ENST00000316399 AGO3Q9H9G7 860 aaKnown RBP7.21□□□□□ -1.26
SOX6-201ENST00000316399 ING3Q9NXR8 418 aa7.21□□□□□ -1.26
SOX6-201ENST00000316399 ADGRE2Q9UHX3 823 aa7.21□□□□□ -1.26
SOX6-201ENST00000316399 SCAF8Q9UPN6 1271 aaKnown RBP7.21□□□□□ -1.26
SOX6-201ENST00000316399 RWDD3Q9Y3V2 267 aa7.21□□□□□ -1.26
SOX6-201ENST00000316399 SAMHD1Q9Y3Z3 626 aaKnown RBP7.21□□□□□ -1.26
SOX6-201ENST00000316399 PRORSD1PA6NEY8 169 aa7.21□□□□□ -1.26
SOX6-201ENST00000316399 REM1O75628 298 aa7.21□□□□□ -1.26
SOX6-201ENST00000316399 KELP23276 732 aa7.21□□□□□ -1.26
SOX6-201ENST00000316399 RPL38P63173 70 aaKnown RBP7.21□□□□□ -1.26
SOX6-201ENST00000316399 GPR33Q49SQ1 333 aa7.21□□□□□ -1.26
SOX6-201ENST00000316399 ZDHHC24Q6UX98 284 aa7.21□□□□□ -1.26
SOX6-201ENST00000316399 ALYREFQ86V81 257 aaKnown RBP7.21□□□□□ -1.26
SOX6-201ENST00000316399 KIAA0319LQ8IZA0 1049 aa7.21□□□□□ -1.26
SOX6-201ENST00000316399 SEMA6AQ9H2E6 1030 aa7.21□□□□□ -1.26
SOX6-201ENST00000316399 NOL11Q9H8H0 719 aaKnown RBP7.21□□□□□ -1.26
SOX6-201ENST00000316399 RPRD1BQ9NQG5 326 aaKnown RBP7.21□□□□□ -1.26
SOX6-201ENST00000316399 KLRG2A4D1S0 409 aaPredicted RBP7.2□□□□□ -1.26
SOX6-201ENST00000316399 KERAO60938 352 aa7.2□□□□□ -1.26
SOX6-201ENST00000316399 ITGA10O75578 1167 aa7.2□□□□□ -1.26
SOX6-201ENST00000316399 ENO2P09104 434 aaPredicted RBP7.2□□□□□ -1.26
SOX6-201ENST00000316399 PTPN5P54829 565 aa7.2□□□□□ -1.26
SOX6-201ENST00000316399 ZNF280AP59817 542 aaPredicted RBP7.2□□□□□ -1.26
SOX6-201ENST00000316399 ALDH6A1Q02252 535 aaKnown RBP7.2□□□□□ -1.26
SOX6-201ENST00000316399 SGCGQ13326 291 aa7.2□□□□□ -1.26
SOX6-201ENST00000316399 TAF1AQ15573 450 aaPredicted RBP7.2□□□□□ -1.26
SOX6-201ENST00000316399 UGCGQ16739 394 aa7.2□□□□□ -1.26
SOX6-201ENST00000316399 HACD2Q6Y1H2 254 aa7.2□□□□□ -1.26
SOX6-201ENST00000316399 TMPRSS11AQ6ZMR5 421 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms