RNA–Protein interactions for RNA: ENST00000302251.9

PDGFD-201, Transcript of platelet derived growth factor D, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDGFD, Length 4,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-201ENST00000302251 H2AFJQ9BTM1 129 aa12.13□□□□□ -0.47
PDGFD-201ENST00000302251 COLEC11Q9BWP8 271 aa12.13□□□□□ -0.47
PDGFD-201ENST00000302251 TRIM54Q9BYV2 358 aa12.13□□□□□ -0.47
PDGFD-201ENST00000302251 MUC3BQ9H195 1237 aa12.13□□□□□ -0.47
PDGFD-201ENST00000302251 XYLT2Q9H1B5 865 aa12.13□□□□□ -0.47
PDGFD-201ENST00000302251 AKTIPQ9H8T0 292 aa12.13□□□□□ -0.47
PDGFD-201ENST00000302251 PLK2Q9NYY3 685 aa12.13□□□□□ -0.47
PDGFD-201ENST00000302251 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.13□□□□□ -0.47
PDGFD-201ENST00000302251 EHD3Q9NZN3 535 aa12.13□□□□□ -0.47
PDGFD-201ENST00000302251 CNTN3Q9P232 1028 aa12.13□□□□□ -0.47
PDGFD-201ENST00000302251 UXTQ9UBK9 157 aaPredicted RBP12.13□□□□□ -0.47
PDGFD-201ENST00000302251 KLRG2A4D1S0 409 aaPredicted RBP12.12□□□□□ -0.47
PDGFD-201ENST00000302251 H3BNH8 94 aa12.12□□□□□ -0.47
PDGFD-201ENST00000302251 SOCS2O14508 198 aa12.12□□□□□ -0.47
PDGFD-201ENST00000302251 VILLO15195 856 aa12.12□□□□□ -0.47
PDGFD-201ENST00000302251 MYO1DO94832 1006 aa12.12□□□□□ -0.47
PDGFD-201ENST00000302251 FBXO21O94952 628 aa12.12□□□□□ -0.47
PDGFD-201ENST00000302251 PRKACGP22612 351 aa12.12□□□□□ -0.47
PDGFD-201ENST00000302251 SNAPC2Q13487 334 aa12.12□□□□□ -0.47
PDGFD-201ENST00000302251 GALNT3Q14435 633 aa12.12□□□□□ -0.47
PDGFD-201ENST00000302251 FSCN1Q16658 493 aaKnown RBP12.12□□□□□ -0.47
PDGFD-201ENST00000302251 TIFABQ6ZNK6 161 aa12.12□□□□□ -0.47
PDGFD-201ENST00000302251 ZC3HC1Q86WB0 502 aaKnown RBP12.12□□□□□ -0.47
PDGFD-201ENST00000302251 RBM12BQ8IXT5 1001 aaKnown RBP12.12□□□□□ -0.47
PDGFD-201ENST00000302251 HS6ST3Q8IZP7 471 aa12.12□□□□□ -0.47
PDGFD-201ENST00000302251 OMA1Q96E52 524 aa12.12□□□□□ -0.47
PDGFD-201ENST00000302251 CITED4Q96RK1 184 aa12.12□□□□□ -0.47
PDGFD-201ENST00000302251 SORT1Q99523 831 aa12.12□□□□□ -0.47
PDGFD-201ENST00000302251 GLOD4Q9HC38 313 aa12.12□□□□□ -0.47
PDGFD-201ENST00000302251 PTGDR2Q9Y5Y4 395 aa12.12□□□□□ -0.47
PDGFD-201ENST00000302251 CROCCQ5TZA2 2017 aa12.12□□□□□ -0.47
PDGFD-201ENST00000302251 YJEFN3A6XGL0 299 aa12.12□□□□□ -0.47
PDGFD-201ENST00000302251 CBX4O00257 560 aa12.12□□□□□ -0.47
PDGFD-201ENST00000302251 ARSAP15289 507 aa12.12□□□□□ -0.47
PDGFD-201ENST00000302251 XPAP23025 273 aaPredicted RBP12.12□□□□□ -0.47
PDGFD-201ENST00000302251 OR1E1P30953 314 aa12.12□□□□□ -0.47
PDGFD-201ENST00000302251 RGS4P49798 205 aa12.12□□□□□ -0.47
PDGFD-201ENST00000302251 RAB39AQ14964 217 aa12.12□□□□□ -0.47
PDGFD-201ENST00000302251 UBE2J2Q8N2K1 259 aa12.12□□□□□ -0.47
PDGFD-201ENST00000302251 OR2T12Q8NG77 320 aa12.12□□□□□ -0.47
PDGFD-201ENST00000302251 SEMA3CQ99985 751 aa12.12□□□□□ -0.47
PDGFD-201ENST00000302251 TYW5A2RUC4 315 aaKnown RBP12.12□□□□□ -0.47
PDGFD-201ENST00000302251 TRIM24O15164 1050 aa12.12□□□□□ -0.47
PDGFD-201ENST00000302251 CCNKO75909 580 aa12.12□□□□□ -0.47
PDGFD-201ENST00000302251 ANXA6P08133 673 aa12.12□□□□□ -0.47
PDGFD-201ENST00000302251 SOX6P35712 828 aa12.12□□□□□ -0.47
PDGFD-201ENST00000302251 HALP42357 657 aa12.12□□□□□ -0.47
PDGFD-201ENST00000302251 PPP3CCP48454 512 aa12.12□□□□□ -0.47
PDGFD-201ENST00000302251 SLC26A2P50443 739 aa12.12□□□□□ -0.47
PDGFD-201ENST00000302251 CLCN5P51795 746 aa12.12□□□□□ -0.47
PDGFD-201ENST00000302251 CYP2A13Q16696 494 aa12.12□□□□□ -0.47
PDGFD-201ENST00000302251 SYT16Q17RD7 645 aa12.12□□□□□ -0.47
PDGFD-201ENST00000302251 IQSEC1Q6DN90 963 aa12.12□□□□□ -0.47
PDGFD-201ENST00000302251 CATSPERGQ6ZRH7 1159 aa12.12□□□□□ -0.47
PDGFD-201ENST00000302251 HFE2Q6ZVN8 426 aa12.12□□□□□ -0.47
PDGFD-201ENST00000302251 ZFP42Q96MM3 310 aa12.12□□□□□ -0.47
PDGFD-201ENST00000302251 MUS81Q96NY9 551 aa12.12□□□□□ -0.47
PDGFD-201ENST00000302251 KCNA7Q96RP8 456 aa12.12□□□□□ -0.47
PDGFD-201ENST00000302251 HAPLN3Q96S86 360 aa12.12□□□□□ -0.47
PDGFD-201ENST00000302251 HERC2P3Q9BVR0 1158 aa12.12□□□□□ -0.47
PDGFD-201ENST00000302251 NMRK2Q9NPI5 230 aa12.12□□□□□ -0.47
PDGFD-201ENST00000302251 VPS51Q9UID3 782 aa12.12□□□□□ -0.47
PDGFD-201ENST00000302251 PDE10AQ9Y233 779 aa12.12□□□□□ -0.47
PDGFD-201ENST00000302251 PCDHGB5Q9Y5G0 923 aa12.12□□□□□ -0.47
PDGFD-201ENST00000302251 B4GAT1O43505 415 aa12.11□□□□□ -0.47
PDGFD-201ENST00000302251 MYCP01106 439 aaPredicted RBP12.11□□□□□ -0.47
PDGFD-201ENST00000302251 JUNP05412 331 aaKnown RBP12.11□□□□□ -0.47
PDGFD-201ENST00000302251 SERPINF2P08697 491 aa12.11□□□□□ -0.47
PDGFD-201ENST00000302251 IL12AP29459 219 aa12.11□□□□□ -0.47
PDGFD-201ENST00000302251 AQP1P29972 269 aa12.11□□□□□ -0.47
PDGFD-201ENST00000302251 FKBP1AP62942 108 aaKnown RBP12.11□□□□□ -0.47
PDGFD-201ENST00000302251 MRPL28Q13084 256 aaKnown RBP12.11□□□□□ -0.47
PDGFD-201ENST00000302251 LAPTM4AQ15012 233 aa12.11□□□□□ -0.47
PDGFD-201ENST00000302251 CCDC142Q17RM4 750 aa12.11□□□□□ -0.47
PDGFD-201ENST00000302251 ZC3H12BQ5HYM0 836 aaKnown RBP12.11□□□□□ -0.47
PDGFD-201ENST00000302251 AKAP14Q86UN6 197 aa12.11□□□□□ -0.47
PDGFD-201ENST00000302251 HIPK1Q86Z02 1210 aa12.11□□□□□ -0.47
PDGFD-201ENST00000302251 B3GALT6Q96L58 329 aa12.11□□□□□ -0.47
PDGFD-201ENST00000302251 FCRL2Q96LA5 508 aaPredicted RBP12.11□□□□□ -0.47
PDGFD-201ENST00000302251 DMRTB1Q96MA1 342 aa12.11□□□□□ -0.47
PDGFD-201ENST00000302251 NIFKQ9BYG3 293 aaKnown RBP12.11□□□□□ -0.47
PDGFD-201ENST00000302251 PIGVQ9NUD9 493 aa12.11□□□□□ -0.47
PDGFD-201ENST00000302251 SMOXQ9NWM0 555 aa12.11□□□□□ -0.47
PDGFD-201ENST00000302251 SLC12A8A0AV02 714 aa12.11□□□□□ -0.47
PDGFD-201ENST00000302251 ARPC2O15144 300 aa12.11□□□□□ -0.47
PDGFD-201ENST00000302251 THP07101 528 aa12.11□□□□□ -0.47
PDGFD-201ENST00000302251 IDO1P14902 403 aa12.11□□□□□ -0.47
PDGFD-201ENST00000302251 ICAM3P32942 547 aa12.11□□□□□ -0.47
PDGFD-201ENST00000302251 MAGEA10P43363 369 aaPredicted RBP12.11□□□□□ -0.47
PDGFD-201ENST00000302251 PTPN9P43378 593 aa12.11□□□□□ -0.47
PDGFD-201ENST00000302251 BCAP31P51572 246 aa12.11□□□□□ -0.47
PDGFD-201ENST00000302251 COPZ1P61923 177 aa12.11□□□□□ -0.47
PDGFD-201ENST00000302251 CSTF3Q12996 717 aaKnown RBP12.11□□□□□ -0.47
PDGFD-201ENST00000302251 PIGGQ5H8A4 983 aa12.11□□□□□ -0.47
PDGFD-201ENST00000302251 TXNDC5Q8NBS9 432 aaKnown RBP12.11□□□□□ -0.47
PDGFD-201ENST00000302251 OR10A6Q8NH74 314 aa12.11□□□□□ -0.47
PDGFD-201ENST00000302251 FAR1Q8WVX9 515 aa12.11□□□□□ -0.47
PDGFD-201ENST00000302251 APOL4Q9BPW4 351 aa12.11□□□□□ -0.47
PDGFD-201ENST00000302251 CINPQ9BW66 212 aaPredicted RBP12.11□□□□□ -0.47
PDGFD-201ENST00000302251 PDZD7Q9H5P4 517 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms