RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 C12orf42Q96LP6 360 aa13.28□□□□□ -0.28
CASC4-201ENST00000299957 SORT1Q99523 831 aa13.28□□□□□ -0.28
CASC4-201ENST00000299957 COMMD8Q9NX08 183 aa13.28□□□□□ -0.28
CASC4-201ENST00000299957 PCDHB5Q9Y5E4 795 aa13.28□□□□□ -0.28
CASC4-201ENST00000299957 KIAA0100Q14667 2235 aaKnown RBP13.28□□□□□ -0.28
CASC4-201ENST00000299957 NIPSNAP2O75323 286 aa13.28□□□□□ -0.28
CASC4-201ENST00000299957 FTH1P02794 183 aa13.28□□□□□ -0.28
CASC4-201ENST00000299957 FUT4P22083 530 aa13.28□□□□□ -0.28
CASC4-201ENST00000299957 DGKEP52429 567 aa13.28□□□□□ -0.28
CASC4-201ENST00000299957 TMEM26Q6ZUK4 368 aa13.28□□□□□ -0.28
CASC4-201ENST00000299957 SYTL1Q8IYJ3 562 aa13.28□□□□□ -0.28
CASC4-201ENST00000299957 ARNTL2Q8WYA1 636 aa13.28□□□□□ -0.28
CASC4-201ENST00000299957 SH3KBP1Q96B97 665 aa13.28□□□□□ -0.28
CASC4-201ENST00000299957 ASB8Q9H765 288 aa13.28□□□□□ -0.28
CASC4-201ENST00000299957 PNPLA8Q9NP80 782 aa13.28□□□□□ -0.28
CASC4-201ENST00000299957 EURLQ9NYK6 297 aa13.28□□□□□ -0.28
CASC4-201ENST00000299957 CNOT6Q9ULM6 557 aaKnown RBP13.28□□□□□ -0.28
CASC4-201ENST00000299957 PADI3Q9ULW8 664 aa13.28□□□□□ -0.28
CASC4-201ENST00000299957 VPS4AQ9UN37 437 aa13.28□□□□□ -0.28
CASC4-201ENST00000299957 SLC22A3O75751 556 aa13.28□□□□□ -0.28
CASC4-201ENST00000299957 PRKACGP22612 351 aa13.28□□□□□ -0.28
CASC4-201ENST00000299957 ACVRL1P37023 503 aa13.28□□□□□ -0.28
CASC4-201ENST00000299957 HSPA7P48741 367 aa13.28□□□□□ -0.28
CASC4-201ENST00000299957 ENTPD1P49961 510 aa13.28□□□□□ -0.28
CASC4-201ENST00000299957 PPIL2Q13356 520 aa13.28□□□□□ -0.28
CASC4-201ENST00000299957 NPY6RQ99463 290 aa13.28□□□□□ -0.28
CASC4-201ENST00000299957 IMPAD1Q9NX62 359 aa13.28□□□□□ -0.28
CASC4-201ENST00000299957 SNX8Q9Y5X2 465 aa13.28□□□□□ -0.28
CASC4-201ENST00000299957 SF3B1O75533 1304 aaKnown RBP eCLIP13.28□□□□□ -0.288e-6■■■■■ 107
CASC4-201ENST00000299957 CCDC162PA2VCL2 907 aa13.27□□□□□ -0.28
CASC4-201ENST00000299957 SLC35E2BP0CK96 405 aa13.27□□□□□ -0.28
CASC4-201ENST00000299957 SERPINB1P30740 379 aa13.27□□□□□ -0.28
CASC4-201ENST00000299957 MC4RP32245 332 aa13.27□□□□□ -0.28
CASC4-201ENST00000299957 GLUD2P49448 558 aa13.27□□□□□ -0.28
CASC4-201ENST00000299957 SEPHS1P49903 392 aa13.27□□□□□ -0.28
CASC4-201ENST00000299957 RPS24P62847 133 aaKnown RBP13.27□□□□□ -0.28
CASC4-201ENST00000299957 HMGCS1Q01581 520 aa13.27□□□□□ -0.28
CASC4-201ENST00000299957 VEPH1Q14D04 833 aa13.27□□□□□ -0.28
CASC4-201ENST00000299957 NFE2Q16621 373 aaPredicted RBP13.27□□□□□ -0.28
CASC4-201ENST00000299957 GALNT18Q6P9A2 607 aa13.27□□□□□ -0.28
CASC4-201ENST00000299957 GPRIN3Q6ZVF9 776 aa13.27□□□□□ -0.28
CASC4-201ENST00000299957 TOP6BLQ8N6T0 577 aa13.27□□□□□ -0.28
CASC4-201ENST00000299957 TNIP2Q8NFZ5 429 aa13.27□□□□□ -0.28
CASC4-201ENST00000299957 OR10A6Q8NH74 314 aa13.27□□□□□ -0.28
CASC4-201ENST00000299957 MAML3Q96JK9 1138 aa13.27□□□□□ -0.28
CASC4-201ENST00000299957 GLT1D1Q96MS3 346 aa13.27□□□□□ -0.28
CASC4-201ENST00000299957 BTBD9Q96Q07 612 aa13.27□□□□□ -0.28
CASC4-201ENST00000299957 FANCEQ9HB96 536 aa13.27□□□□□ -0.28
CASC4-201ENST00000299957 TRNAU1APQ9NX07 287 aaKnown RBP13.27□□□□□ -0.28
CASC4-201ENST00000299957 ARL15Q9NXU5 204 aa13.27□□□□□ -0.28
CASC4-201ENST00000299957 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.27□□□□□ -0.28
CASC4-201ENST00000299957 PLCH1Q4KWH8 1693 aa13.27□□□□□ -0.28
CASC4-201ENST00000299957 EP400Q96L91 3159 aa13.27□□□□□ -0.29
CASC4-201ENST00000299957 HMX2A2RU54 273 aa13.27□□□□□ -0.29
CASC4-201ENST00000299957 CAPN14A8MX76 684 aa13.27□□□□□ -0.29
CASC4-201ENST00000299957 CDC7O00311 574 aa13.27□□□□□ -0.29
CASC4-201ENST00000299957 SNNO75324 88 aaPredicted RBP13.27□□□□□ -0.29
CASC4-201ENST00000299957 H6PDO95479 791 aa13.27□□□□□ -0.29
CASC4-201ENST00000299957 CD1EP15812 388 aa13.27□□□□□ -0.29
CASC4-201ENST00000299957 GDF5P43026 501 aa13.27□□□□□ -0.29
CASC4-201ENST00000299957 CLCQ05315 142 aa13.27□□□□□ -0.29
CASC4-201ENST00000299957 CNTD1Q8N815 330 aa13.27□□□□□ -0.29
CASC4-201ENST00000299957 SIDT2Q8NBJ9 832 aaKnown RBP13.27□□□□□ -0.29
CASC4-201ENST00000299957 OSCP1Q8WVF1 389 aa13.27□□□□□ -0.29
CASC4-201ENST00000299957 RORBQ92753 470 aa13.27□□□□□ -0.29
CASC4-201ENST00000299957 ZBTB26Q9HCK0 441 aa13.27□□□□□ -0.29
CASC4-201ENST00000299957 POLG2Q9UHN1 485 aa13.27□□□□□ -0.29
CASC4-201ENST00000299957 ATP6V1E1P36543 226 aa13.27□□□□□ -0.29
CASC4-201ENST00000299957 PRKAA2P54646 552 aa13.27□□□□□ -0.29
CASC4-201ENST00000299957 TSTD2Q5T7W7 516 aa13.27□□□□□ -0.29
CASC4-201ENST00000299957 CPSF7Q8N684 471 aaKnown RBP13.27□□□□□ -0.29
CASC4-201ENST00000299957 CLDN19Q8N6F1 224 aa13.27□□□□□ -0.29
CASC4-201ENST00000299957 GATA6Q92908 595 aa13.27□□□□□ -0.29
CASC4-201ENST00000299957 MAGED4Q96JG8 741 aa13.27□□□□□ -0.29
CASC4-201ENST00000299957 BHMG1C9JSJ3 638 aaPredicted RBP13.26□□□□□ -0.29
CASC4-201ENST00000299957 F8W810 466 aa13.26□□□□□ -0.29
CASC4-201ENST00000299957 DPYSL4O14531 572 aa13.26□□□□□ -0.29
CASC4-201ENST00000299957 ATP6V1G1O75348 118 aa13.26□□□□□ -0.29
CASC4-201ENST00000299957 DIRAS1O95057 198 aa13.26□□□□□ -0.29
CASC4-201ENST00000299957 CHRM5P08912 532 aaPredicted RBP13.26□□□□□ -0.29
CASC4-201ENST00000299957 DBTP11182 482 aaKnown RBP13.26□□□□□ -0.29
CASC4-201ENST00000299957 PRIM2P49643 509 aa13.26□□□□□ -0.29
CASC4-201ENST00000299957 AGTR2P50052 363 aa13.26□□□□□ -0.29
CASC4-201ENST00000299957 C8orf59Q8N0T1 100 aaPredicted RBP13.26□□□□□ -0.29
CASC4-201ENST00000299957 CRYBG2Q8N1P7 616 aa13.26□□□□□ -0.29
CASC4-201ENST00000299957 TMEM86AQ8N2M4 240 aa13.26□□□□□ -0.29
CASC4-201ENST00000299957 GPR156Q8NFN8 814 aa13.26□□□□□ -0.29
CASC4-201ENST00000299957 PSMA8Q8TAA3 256 aa13.26□□□□□ -0.29
CASC4-201ENST00000299957 GRIN3AQ8TCU5 1115 aa13.26□□□□□ -0.29
CASC4-201ENST00000299957 SELENOMQ8WWX9 145 aa13.26□□□□□ -0.29
CASC4-201ENST00000299957 SLC29A1Q99808 456 aa13.26□□□□□ -0.29
CASC4-201ENST00000299957 CHID1Q9BWS9 393 aa13.26□□□□□ -0.29
CASC4-201ENST00000299957 TLR8Q9NR97 1041 aaKnown RBP13.26□□□□□ -0.29
CASC4-201ENST00000299957 FAM32AQ9Y421 112 aaKnown RBP13.26□□□□□ -0.29
CASC4-201ENST00000299957 ACTL7AQ9Y615 435 aa13.26□□□□□ -0.29
CASC4-201ENST00000299957 MICAL3Q7RTP6 2002 aa13.26□□□□□ -0.29
CASC4-201ENST00000299957 CFAP99D6REC4 459 aa13.26□□□□□ -0.29
CASC4-201ENST00000299957 KCNA5P22460 613 aa13.26□□□□□ -0.29
CASC4-201ENST00000299957 HOXA11P31270 313 aaPredicted RBP13.26□□□□□ -0.29
CASC4-201ENST00000299957 CRYBB1P53674 252 aaPredicted RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms