RNA–Protein interactions for RNA: ENST00000294008.3

SLX4-201, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLX4, Length 7,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-201ENST00000294008 CYP1A2P05177 515 aa12.42□□□□□ -0.42
SLX4-201ENST00000294008 CALB2P22676 271 aa12.42□□□□□ -0.42
SLX4-201ENST00000294008 CAPGP40121 348 aa12.42□□□□□ -0.42
SLX4-201ENST00000294008 ACVR2BQ13705 512 aa12.42□□□□□ -0.42
SLX4-201ENST00000294008 AADACL4Q5VUY2 407 aa12.42□□□□□ -0.42
SLX4-201ENST00000294008 COMTD1Q86VU5 262 aa12.42□□□□□ -0.42
SLX4-201ENST00000294008 SOCS4Q8WXH5 440 aa12.42□□□□□ -0.42
SLX4-201ENST00000294008 KLHL15Q96M94 604 aa12.42□□□□□ -0.42
SLX4-201ENST00000294008 BCAS3Q9H6U6 928 aa12.42□□□□□ -0.42
SLX4-201ENST00000294008 SEMA3GQ9NS98 782 aa12.42□□□□□ -0.42
SLX4-201ENST00000294008 PLCL2Q9UPR0 1127 aa12.42□□□□□ -0.42
SLX4-201ENST00000294008 PCDHB3Q9Y5E6 796 aa12.42□□□□□ -0.42
SLX4-201ENST00000294008 HMGXB3Q12766 1538 aa12.42□□□□□ -0.42
SLX4-201ENST00000294008 TRIM64CA6NLI5 447 aa12.42□□□□□ -0.42
SLX4-201ENST00000294008 ICAM1P05362 532 aa12.42□□□□□ -0.42
SLX4-201ENST00000294008 VARSP26640 1264 aaKnown RBP12.42□□□□□ -0.42
SLX4-201ENST00000294008 NPTX2P47972 431 aa12.42□□□□□ -0.42
SLX4-201ENST00000294008 SMIM11AP58511 58 aa12.42□□□□□ -0.42
SLX4-201ENST00000294008 ARFRP1Q13795 201 aa12.42□□□□□ -0.42
SLX4-201ENST00000294008 NR1I3Q14994 352 aa12.42□□□□□ -0.42
SLX4-201ENST00000294008 RASGEF1CQ8N431 466 aa12.42□□□□□ -0.42
SLX4-201ENST00000294008 PCDH19Q8TAB3 1148 aa12.42□□□□□ -0.42
SLX4-201ENST00000294008 ACER1Q8TDN7 264 aa12.42□□□□□ -0.42
SLX4-201ENST00000294008 HMGB4Q8WW32 186 aa12.42□□□□□ -0.42
SLX4-201ENST00000294008 HTR3CQ8WXA8 447 aa12.42□□□□□ -0.42
SLX4-201ENST00000294008 CDCA5Q96FF9 252 aa12.42□□□□□ -0.42
SLX4-201ENST00000294008 MAGEB18Q96M61 343 aa12.42□□□□□ -0.42
SLX4-201ENST00000294008 EPYCQ99645 322 aa12.42□□□□□ -0.42
SLX4-201ENST00000294008 CPNE1Q99829 537 aa12.42□□□□□ -0.42
SLX4-201ENST00000294008 TMEM121BQ9BXQ6 578 aaPredicted RBP12.42□□□□□ -0.42
SLX4-201ENST00000294008 TMEM253P0C7T8 217 aa12.42□□□□□ -0.42
SLX4-201ENST00000294008 ZSCAN5DPP0CG00 497 aa12.42□□□□□ -0.42
SLX4-201ENST00000294008 LAMP2P13473 410 aa12.42□□□□□ -0.42
SLX4-201ENST00000294008 RPS12P25398 132 aaKnown RBP12.42□□□□□ -0.42
SLX4-201ENST00000294008 GRIA3P42263 894 aa12.42□□□□□ -0.42
SLX4-201ENST00000294008 ALDH5A1P51649 535 aaPredicted RBP12.42□□□□□ -0.42
SLX4-201ENST00000294008 ZNF844Q08AG5 666 aa12.42□□□□□ -0.42
SLX4-201ENST00000294008 SHC4Q6S5L8 630 aa12.42□□□□□ -0.42
SLX4-201ENST00000294008 CLIP4Q8N3C7 705 aa12.42□□□□□ -0.42
SLX4-201ENST00000294008 KLHL5Q96PQ7 755 aa12.42□□□□□ -0.42
SLX4-201ENST00000294008 NIFKQ9BYG3 293 aaKnown RBP12.42□□□□□ -0.42
SLX4-201ENST00000294008 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.42□□□□□ -0.42
SLX4-201ENST00000294008 GPATCH8Q9UKJ3 1502 aaKnown RBP12.42□□□□□ -0.42
SLX4-201ENST00000294008 MID1O15344 667 aa12.42□□□□□ -0.42
SLX4-201ENST00000294008 MAGEC1O60732 1142 aa12.42□□□□□ -0.42
SLX4-201ENST00000294008 FGBP02675 491 aa12.42□□□□□ -0.42
SLX4-201ENST00000294008 ARP10275 920 aa12.42□□□□□ -0.42
SLX4-201ENST00000294008 CDKN1CP49918 316 aaPredicted RBP12.42□□□□□ -0.42
SLX4-201ENST00000294008 MAP2K5Q13163 448 aa12.42□□□□□ -0.42
SLX4-201ENST00000294008 ANKS1BQ7Z6G8 1248 aa12.42□□□□□ -0.42
SLX4-201ENST00000294008 C17orf64Q86WR6 236 aa12.42□□□□□ -0.42
SLX4-201ENST00000294008 ZNF548Q8NEK5 533 aaPredicted RBP12.42□□□□□ -0.42
SLX4-201ENST00000294008 SMG7Q92540 1137 aaKnown RBP12.42□□□□□ -0.42
SLX4-201ENST00000294008 ULBP1Q9BZM6 244 aa12.42□□□□□ -0.42
SLX4-201ENST00000294008 ST3GAL5Q9UNP4 418 aa12.42□□□□□ -0.42
SLX4-201ENST00000294008 WASF3Q9UPY6 502 aa12.42□□□□□ -0.42
SLX4-201ENST00000294008 WASF2Q9Y6W5 498 aa12.42□□□□□ -0.42
SLX4-201ENST00000294008 NRCAMQ92823 1304 aa12.42□□□□□ -0.42
SLX4-201ENST00000294008 MAGEB16A2A368 324 aa12.42□□□□□ -0.42
SLX4-201ENST00000294008 ANKRD34BA5PLL1 514 aa12.42□□□□□ -0.42
SLX4-201ENST00000294008 OR14I1A6ND48 311 aa12.42□□□□□ -0.42
SLX4-201ENST00000294008 LACTBL1A8MY62 500 aa12.42□□□□□ -0.42
SLX4-201ENST00000294008 M0R036 132 aa12.42□□□□□ -0.42
SLX4-201ENST00000294008 MPPED1O15442 326 aa12.42□□□□□ -0.42
SLX4-201ENST00000294008 PGAM1P18669 254 aa12.42□□□□□ -0.42
SLX4-201ENST00000294008 CD53P19397 219 aa12.42□□□□□ -0.42
SLX4-201ENST00000294008 MLLT3P42568 568 aaPredicted RBP12.42□□□□□ -0.42
SLX4-201ENST00000294008 MRPS22P82650 360 aaKnown RBP12.42□□□□□ -0.42
SLX4-201ENST00000294008 CREMQ03060 361 aa12.42□□□□□ -0.42
SLX4-201ENST00000294008 ALG10BQ5I7T1 473 aa12.42□□□□□ -0.42
SLX4-201ENST00000294008 KLHDC7AQ5VTJ3 777 aa12.42□□□□□ -0.42
SLX4-201ENST00000294008 C1orf186Q6ZWK4 172 aa12.42□□□□□ -0.42
SLX4-201ENST00000294008 SLC26A11Q86WA9 606 aa12.42□□□□□ -0.42
SLX4-201ENST00000294008 TMEM156Q8N614 296 aa12.42□□□□□ -0.42
SLX4-201ENST00000294008 PLEKHG4BQ96PX9 1271 aa12.42□□□□□ -0.42
SLX4-201ENST00000294008 TBX5Q99593 518 aa12.42□□□□□ -0.42
SLX4-201ENST00000294008 CFAP97Q9P2B7 532 aa12.42□□□□□ -0.42
SLX4-201ENST00000294008 MRPS17Q9Y2R5 130 aaKnown RBP12.42□□□□□ -0.42
SLX4-201ENST00000294008 ANXA2P2A6NMY6 339 aa12.41□□□□□ -0.42
SLX4-201ENST00000294008 ENTPD3O75355 529 aa12.41□□□□□ -0.42
SLX4-201ENST00000294008 ZMPSTE24O75844 475 aa12.41□□□□□ -0.42
SLX4-201ENST00000294008 CSF2P04141 144 aa12.41□□□□□ -0.42
SLX4-201ENST00000294008 ANXA2P07355 339 aaKnown RBP12.41□□□□□ -0.42
SLX4-201ENST00000294008 CNTFP26441 200 aa12.41□□□□□ -0.42
SLX4-201ENST00000294008 CHKAP35790 457 aa12.41□□□□□ -0.42
SLX4-201ENST00000294008 ADAM8P78325 824 aa12.41□□□□□ -0.42
SLX4-201ENST00000294008 CDK10Q15131 360 aa12.41□□□□□ -0.42
SLX4-201ENST00000294008 SNAPC1Q16533 368 aa12.41□□□□□ -0.42
SLX4-201ENST00000294008 HGSNATQ68CP4 663 aa12.41□□□□□ -0.42
SLX4-201ENST00000294008 QSOX2Q6ZRP7 698 aa12.41□□□□□ -0.42
SLX4-201ENST00000294008 SYVN1Q86TM6 617 aa12.41□□□□□ -0.42
SLX4-201ENST00000294008 ZNF527Q8NB42 609 aa12.41□□□□□ -0.42
SLX4-201ENST00000294008 FAM13CQ8NE31 585 aa12.41□□□□□ -0.42
SLX4-201ENST00000294008 AP3S1Q92572 193 aa12.41□□□□□ -0.42
SLX4-201ENST00000294008 NINJ1Q92982 152 aa12.41□□□□□ -0.42
SLX4-201ENST00000294008 SLC47A1Q96FL8 570 aa12.41□□□□□ -0.42
SLX4-201ENST00000294008 ASB2Q96Q27 587 aa12.41□□□□□ -0.42
SLX4-201ENST00000294008 GFM1Q96RP9 751 aaKnown RBP12.41□□□□□ -0.42
SLX4-201ENST00000294008 MEAF6Q9HAF1 191 aa12.41□□□□□ -0.42
SLX4-201ENST00000294008 PHPT1Q9NRX4 125 aaPredicted RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms