RNA–Protein interactions for RNA: ENST00000274901.8

HMGCLL1-201, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-201ENST00000274901 USP3Q9Y6I4 520 aa9.17□□□□□ -0.94
HMGCLL1-201ENST00000274901 ANK1P16157 1881 aa9.17□□□□□ -0.94
HMGCLL1-201ENST00000274901 A0A0J9YYE9 177 aa9.17□□□□□ -0.94
HMGCLL1-201ENST00000274901 FAM172BPA6NC97 362 aa9.17□□□□□ -0.94
HMGCLL1-201ENST00000274901 ZSCAN5BA6NJL1 495 aa9.17□□□□□ -0.94
HMGCLL1-201ENST00000274901 CENPBD1B2RD01 187 aa9.17□□□□□ -0.94
HMGCLL1-201ENST00000274901 KCNK1O00180 336 aa9.17□□□□□ -0.94
HMGCLL1-201ENST00000274901 AP3D1O14617 1153 aa9.17□□□□□ -0.94
HMGCLL1-201ENST00000274901 TIMM44O43615 452 aa9.17□□□□□ -0.94
HMGCLL1-201ENST00000274901 NPHS1O60500 1241 aa9.17□□□□□ -0.94
HMGCLL1-201ENST00000274901 DEAF1O75398 565 aaPredicted RBP9.17□□□□□ -0.94
HMGCLL1-201ENST00000274901 DDNO94850 711 aaPredicted RBP9.17□□□□□ -0.94
HMGCLL1-201ENST00000274901 ALX3O95076 343 aa9.17□□□□□ -0.94
HMGCLL1-201ENST00000274901 LDLRP01130 860 aa9.17□□□□□ -0.94
HMGCLL1-201ENST00000274901 ALPLP05186 524 aa9.17□□□□□ -0.94
HMGCLL1-201ENST00000274901 ICAM1P05362 532 aa9.17□□□□□ -0.94
HMGCLL1-201ENST00000274901 ITGB6P18564 788 aa9.17□□□□□ -0.94
HMGCLL1-201ENST00000274901 GTF2E2P29084 291 aaKnown RBP9.17□□□□□ -0.94
HMGCLL1-201ENST00000274901 CD6P30203 668 aa9.17□□□□□ -0.94
HMGCLL1-201ENST00000274901 GSK3BP49841 420 aa9.17□□□□□ -0.94
HMGCLL1-201ENST00000274901 P2RX3P56373 397 aa9.17□□□□□ -0.94
HMGCLL1-201ENST00000274901 CD47Q08722 323 aa9.17□□□□□ -0.94
HMGCLL1-201ENST00000274901 DPYSL2Q16555 572 aa9.17□□□□□ -0.94
HMGCLL1-201ENST00000274901 COLEC12Q5KU26 742 aa9.17□□□□□ -0.94
HMGCLL1-201ENST00000274901 C6orf141Q5SZD1 244 aa9.17□□□□□ -0.94
HMGCLL1-201ENST00000274901 ATAD3CQ5T2N8 411 aa9.17□□□□□ -0.94
HMGCLL1-201ENST00000274901 SLX4IPQ5VYV7 408 aa9.17□□□□□ -0.94
HMGCLL1-201ENST00000274901 LARP4Q71RC2 724 aaKnown RBP eCLIP9.17□□□□□ -0.94
HMGCLL1-201ENST00000274901 ADCK1Q86TW2 530 aa9.17□□□□□ -0.94
HMGCLL1-201ENST00000274901 CUZD1Q86UP6 607 aa9.17□□□□□ -0.94
HMGCLL1-201ENST00000274901 POC5Q8NA72 575 aa9.17□□□□□ -0.94
HMGCLL1-201ENST00000274901 RHOXF1Q8NHV9 184 aa9.17□□□□□ -0.94
HMGCLL1-201ENST00000274901 CLEC4CQ8WTT0 213 aa9.17□□□□□ -0.94
HMGCLL1-201ENST00000274901 NACC2Q96BF6 587 aa9.17□□□□□ -0.94
HMGCLL1-201ENST00000274901 MED30Q96HR3 178 aa9.17□□□□□ -0.94
HMGCLL1-201ENST00000274901 ELMO2Q96JJ3 720 aa9.17□□□□□ -0.94
HMGCLL1-201ENST00000274901 PDCD2LQ9BRP1 358 aa9.17□□□□□ -0.94
HMGCLL1-201ENST00000274901 NAT9Q9BTE0 207 aa9.17□□□□□ -0.94
HMGCLL1-201ENST00000274901 BCO2Q9BYV7 579 aa9.17□□□□□ -0.94
HMGCLL1-201ENST00000274901 PORCNQ9H237 461 aa9.17□□□□□ -0.94
HMGCLL1-201ENST00000274901 SMURF2Q9HAU4 748 aa9.17□□□□□ -0.94
HMGCLL1-201ENST00000274901 PRDM8Q9NQV8 689 aa9.17□□□□□ -0.94
HMGCLL1-201ENST00000274901 MID2Q9UJV3 735 aa9.17□□□□□ -0.94
HMGCLL1-201ENST00000274901 FEM1BQ9UK73 627 aa9.17□□□□□ -0.94
HMGCLL1-201ENST00000274901 SYNPO2Q9UMS6 1093 aa9.17□□□□□ -0.94
HMGCLL1-201ENST00000274901 PDE10AQ9Y233 779 aa9.17□□□□□ -0.94
HMGCLL1-201ENST00000274901 PCDHA9Q9Y5H5 950 aa9.17□□□□□ -0.94
HMGCLL1-201ENST00000274901 M0R3G1 203 aa9.16□□□□□ -0.94
HMGCLL1-201ENST00000274901 DPYSL4O14531 572 aa9.16□□□□□ -0.94
HMGCLL1-201ENST00000274901 OGTO15294 1046 aa9.16□□□□□ -0.94
HMGCLL1-201ENST00000274901 XPNPEP2O43895 674 aa9.16□□□□□ -0.94
HMGCLL1-201ENST00000274901 CILPO75339 1184 aa9.16□□□□□ -0.94
HMGCLL1-201ENST00000274901 CCNKO75909 580 aa9.16□□□□□ -0.94
HMGCLL1-201ENST00000274901 RGS20O76081 388 aa9.16□□□□□ -0.94
HMGCLL1-201ENST00000274901 TOMM70O94826 608 aa9.16□□□□□ -0.94
HMGCLL1-201ENST00000274901 AHSGP02765 367 aa9.16□□□□□ -0.94
HMGCLL1-201ENST00000274901 MYCLP1P12525 358 aaPredicted RBP9.16□□□□□ -0.94
HMGCLL1-201ENST00000274901 ITIH1P19827 911 aa9.16□□□□□ -0.94
HMGCLL1-201ENST00000274901 HRH2P25021 359 aa9.16□□□□□ -0.94
HMGCLL1-201ENST00000274901 SLC26A2P50443 739 aa9.16□□□□□ -0.94
HMGCLL1-201ENST00000274901 PPP5CP53041 499 aa9.16□□□□□ -0.94
HMGCLL1-201ENST00000274901 ACTR2P61160 394 aa9.16□□□□□ -0.94
HMGCLL1-201ENST00000274901 EMX1Q04741 257 aaPredicted RBP9.16□□□□□ -0.94
HMGCLL1-201ENST00000274901 BST2Q10589 180 aaKnown RBP9.16□□□□□ -0.94
HMGCLL1-201ENST00000274901 CAPSQ13938 189 aa9.16□□□□□ -0.94
HMGCLL1-201ENST00000274901 GPR162Q16538 588 aa9.16□□□□□ -0.94
HMGCLL1-201ENST00000274901 FAM214AQ32MH5 1076 aa9.16□□□□□ -0.94
HMGCLL1-201ENST00000274901 Q5BKY6 102 aa9.16□□□□□ -0.94
HMGCLL1-201ENST00000274901 RBM48Q5RL73 367 aaKnown RBP9.16□□□□□ -0.94
HMGCLL1-201ENST00000274901 CCDC81Q6ZN84 652 aa9.16□□□□□ -0.94
HMGCLL1-201ENST00000274901 DENND6AQ8IWF6 608 aa9.16□□□□□ -0.94
HMGCLL1-201ENST00000274901 PNPLA1Q8N8W4 532 aa9.16□□□□□ -0.94
HMGCLL1-201ENST00000274901 ASCC1Q8N9N2 400 aaKnown RBP9.16□□□□□ -0.94
HMGCLL1-201ENST00000274901 PAPD5Q8NDF8 572 aaKnown RBP9.16□□□□□ -0.94
HMGCLL1-201ENST00000274901 PHF10Q8WUB8 498 aaKnown RBP9.16□□□□□ -0.94
HMGCLL1-201ENST00000274901 HDAC2Q92769 488 aaKnown RBP9.16□□□□□ -0.94
HMGCLL1-201ENST00000274901 TMEM125Q96AQ2 219 aa9.16□□□□□ -0.94
HMGCLL1-201ENST00000274901 ROPN1LQ96C74 230 aa9.16□□□□□ -0.94
HMGCLL1-201ENST00000274901 TMEM176AQ96HP8 235 aa9.16□□□□□ -0.94
HMGCLL1-201ENST00000274901 HEXIM2Q96MH2 286 aaKnown RBP9.16□□□□□ -0.94
HMGCLL1-201ENST00000274901 TMEM74Q96NL1 305 aa9.16□□□□□ -0.94
HMGCLL1-201ENST00000274901 ZNF300Q96RE9 604 aaPredicted RBP9.16□□□□□ -0.94
HMGCLL1-201ENST00000274901 SH3GL1Q99961 368 aa9.16□□□□□ -0.94
HMGCLL1-201ENST00000274901 RHNO1Q9BSD3 238 aa9.16□□□□□ -0.94
HMGCLL1-201ENST00000274901 CHID1Q9BWS9 393 aa9.16□□□□□ -0.94
HMGCLL1-201ENST00000274901 RHOBTB2Q9BYZ6 727 aa9.16□□□□□ -0.94
HMGCLL1-201ENST00000274901 TRIM15Q9C019 465 aa9.16□□□□□ -0.94
HMGCLL1-201ENST00000274901 CNGB3Q9NQW8 809 aa9.16□□□□□ -0.94
HMGCLL1-201ENST00000274901 SNTG2Q9NY99 539 aa9.16□□□□□ -0.94
HMGCLL1-201ENST00000274901 SLAMF8Q9P0V8 285 aa9.16□□□□□ -0.94
HMGCLL1-201ENST00000274901 ANAPC2Q9UJX6 822 aa9.16□□□□□ -0.94
HMGCLL1-201ENST00000274901 EIF3LQ9Y262 564 aaKnown RBP9.16□□□□□ -0.94
HMGCLL1-201ENST00000274901 INVSQ9Y283 1065 aa9.16□□□□□ -0.94
HMGCLL1-201ENST00000274901 NRCAMQ92823 1304 aa9.16□□□□□ -0.94
HMGCLL1-201ENST00000274901 UNCXA6NJT0 531 aa9.16□□□□□ -0.94
HMGCLL1-201ENST00000274901 ZNF99A8MXY4 864 aaPredicted RBP9.16□□□□□ -0.94
HMGCLL1-201ENST00000274901 NOBOXO60393 691 aa9.16□□□□□ -0.94
HMGCLL1-201ENST00000274901 LRIG2O94898 1065 aa9.16□□□□□ -0.94
HMGCLL1-201ENST00000274901 SEC24AO95486 1093 aa9.16□□□□□ -0.94
HMGCLL1-201ENST00000274901 CHRNA1P02708 482 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms