RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 CACNG1Q06432 222 aa16.32■□□□□ 0.2
TPM1-201ENST00000267996 TSNAXIP1Q2TAA8 658 aa16.32■□□□□ 0.2
TPM1-201ENST00000267996 AARS2Q5JTZ9 985 aaKnown RBP16.32■□□□□ 0.2
TPM1-201ENST00000267996 ATG16L1Q676U5 607 aa16.32■□□□□ 0.2
TPM1-201ENST00000267996 PSAPL1Q6NUJ1 521 aa16.32■□□□□ 0.2
TPM1-201ENST00000267996 CHRDL2Q6WN34 429 aa16.32■□□□□ 0.2
TPM1-201ENST00000267996 TSPAN33Q86UF1 283 aa16.32■□□□□ 0.2
TPM1-201ENST00000267996 SPATS2Q86XZ4 545 aaKnown RBP16.32■□□□□ 0.2
TPM1-201ENST00000267996 PAF1Q8N7H5 531 aa16.32■□□□□ 0.2
TPM1-201ENST00000267996 CCDC63Q8NA47 563 aa16.32■□□□□ 0.2
TPM1-201ENST00000267996 OR6Y1Q8NGX8 325 aa16.32■□□□□ 0.2
TPM1-201ENST00000267996 RDH11Q8TC12 318 aa16.32■□□□□ 0.2
TPM1-201ENST00000267996 FGF14Q92915 247 aa16.32■□□□□ 0.2
TPM1-201ENST00000267996 CHFRQ96EP1 664 aa16.32■□□□□ 0.2
TPM1-201ENST00000267996 UBXN10Q96LJ8 280 aa16.32■□□□□ 0.2
TPM1-201ENST00000267996 TSNARE1Q96NA8 513 aa16.32■□□□□ 0.2
TPM1-201ENST00000267996 KXD1Q9BQD3 176 aa16.32■□□□□ 0.2
TPM1-201ENST00000267996 POPDC3Q9HBV1 291 aa16.32■□□□□ 0.2
TPM1-201ENST00000267996 IGSF5Q9NSI5 407 aa16.32■□□□□ 0.2
TPM1-201ENST00000267996 DKK3Q9UBP4 350 aa16.32■□□□□ 0.2
TPM1-201ENST00000267996 PLA2G4CQ9UP65 541 aa16.32■□□□□ 0.2
TPM1-201ENST00000267996 RUVBL2Q9Y230 463 aaKnown RBP16.32■□□□□ 0.2
TPM1-201ENST00000267996 USP15Q9Y4E8 981 aaPredicted RBP16.32■□□□□ 0.2
TPM1-201ENST00000267996 G3V2L1 256 aa16.31■□□□□ 0.2
TPM1-201ENST00000267996 ARNTLO00327 626 aa16.31■□□□□ 0.2
TPM1-201ENST00000267996 SNNO75324 88 aaPredicted RBP16.31■□□□□ 0.2
TPM1-201ENST00000267996 NDUFS3O75489 264 aa16.31■□□□□ 0.2
TPM1-201ENST00000267996 LEFTY1O75610 366 aa16.31■□□□□ 0.2
TPM1-201ENST00000267996 CTSLP07711 333 aa16.31■□□□□ 0.2
TPM1-201ENST00000267996 SBK3P0C264 359 aa16.31■□□□□ 0.2
TPM1-201ENST00000267996 FGF3P11487 239 aaPredicted RBP16.31■□□□□ 0.2
TPM1-201ENST00000267996 NEFHP12036 1026 aa16.31■□□□□ 0.2
TPM1-201ENST00000267996 BPIP17213 487 aa16.31■□□□□ 0.2
TPM1-201ENST00000267996 SP100P23497 879 aaPredicted RBP16.31■□□□□ 0.2
TPM1-201ENST00000267996 ADARP55265 1226 aaKnown RBP16.31■□□□□ 0.2
TPM1-201ENST00000267996 KDSRQ06136 332 aa16.31■□□□□ 0.2
TPM1-201ENST00000267996 BST1Q10588 318 aa16.31■□□□□ 0.2
TPM1-201ENST00000267996 CHI3L2Q15782 390 aa16.31■□□□□ 0.2
TPM1-201ENST00000267996 LRIT3Q3SXY7 679 aa16.31■□□□□ 0.2
TPM1-201ENST00000267996 ARSIQ5FYB1 569 aa16.31■□□□□ 0.2
TPM1-201ENST00000267996 TTC8Q8TAM2 541 aa16.31■□□□□ 0.2
TPM1-201ENST00000267996 NXNL1Q96CM4 212 aa16.31■□□□□ 0.2
TPM1-201ENST00000267996 TSSK1BQ9BXA7 367 aa16.31■□□□□ 0.2
TPM1-201ENST00000267996 MTG2Q9H4K7 406 aa16.31■□□□□ 0.2
TPM1-201ENST00000267996 IL26Q9NPH9 171 aa16.31■□□□□ 0.2
TPM1-201ENST00000267996 GTSE1Q9NYZ3 720 aa16.31■□□□□ 0.2
TPM1-201ENST00000267996 IL36AQ9UHA7 158 aa16.31■□□□□ 0.2
TPM1-201ENST00000267996 MID2Q9UJV3 735 aa16.31■□□□□ 0.2
TPM1-201ENST00000267996 APPL1Q9UKG1 709 aa16.31■□□□□ 0.2
TPM1-201ENST00000267996 TMEM265A0A087WTH1 108 aa16.3■□□□□ 0.2
TPM1-201ENST00000267996 TRBV5-4A0A0C4DH59 114 aa16.3■□□□□ 0.2
TPM1-201ENST00000267996 PFDN6O15212 129 aa16.3■□□□□ 0.2
TPM1-201ENST00000267996 SRP72O76094 671 aaKnown RBP16.3■□□□□ 0.2
TPM1-201ENST00000267996 CD9P21926 228 aa16.3■□□□□ 0.2
TPM1-201ENST00000267996 LHCGRP22888 699 aa16.3■□□□□ 0.2
TPM1-201ENST00000267996 PTSQ03393 145 aa16.3■□□□□ 0.2
TPM1-201ENST00000267996 HNRNPA1L2Q32P51 320 aaKnown RBP16.3■□□□□ 0.2
TPM1-201ENST00000267996 ZRANB3Q5FWF4 1079 aa16.3■□□□□ 0.2
TPM1-201ENST00000267996 LRRC66Q68CR7 880 aa16.3■□□□□ 0.2
TPM1-201ENST00000267996 NAIF1Q69YI7 327 aaPredicted RBP16.3■□□□□ 0.2
TPM1-201ENST00000267996 LRRC8EQ6NSJ5 796 aa16.3■□□□□ 0.2
TPM1-201ENST00000267996 CERS6Q6ZMG9 384 aa16.3■□□□□ 0.2
TPM1-201ENST00000267996 C10orf107Q8IVU9 208 aa16.3■□□□□ 0.2
TPM1-201ENST00000267996 C7orf26Q96N11 449 aa16.3■□□□□ 0.2
TPM1-201ENST00000267996 RPP25Q9BUL9 199 aaKnown RBP16.3■□□□□ 0.2
TPM1-201ENST00000267996 TTYH1Q9H313 450 aaPredicted RBP16.3■□□□□ 0.2
TPM1-201ENST00000267996 TMEM245Q9H330 911 aa16.3■□□□□ 0.2
TPM1-201ENST00000267996 FAM96AQ9H5X1 160 aa16.3■□□□□ 0.2
TPM1-201ENST00000267996 EPS15L1Q9UBC2 864 aa16.3■□□□□ 0.2
TPM1-201ENST00000267996 MED16Q9Y2X0 877 aa16.3■□□□□ 0.2
TPM1-201ENST00000267996 SLC30A1Q9Y6M5 507 aa16.3■□□□□ 0.2
TPM1-201ENST00000267996 TNRC18O15417 2968 aaPredicted RBP16.3■□□□□ 0.2
TPM1-201ENST00000267996 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.3■□□□□ 0.2
TPM1-201ENST00000267996 TGDSO95455 350 aa16.3■□□□□ 0.2
TPM1-201ENST00000267996 TIMP2P16035 220 aa16.3■□□□□ 0.2
TPM1-201ENST00000267996 KCNA4P22459 653 aa16.3■□□□□ 0.2
TPM1-201ENST00000267996 GDI1P31150 447 aa16.3■□□□□ 0.2
TPM1-201ENST00000267996 PTGER3P43115 390 aa16.3■□□□□ 0.2
TPM1-201ENST00000267996 OCRLQ01968 901 aa16.3■□□□□ 0.2
TPM1-201ENST00000267996 ADGRE1Q14246 886 aa16.3■□□□□ 0.2
TPM1-201ENST00000267996 ZNF805Q5CZA5 627 aa16.3■□□□□ 0.2
TPM1-201ENST00000267996 TMEM207Q6UWW9 146 aa16.3■□□□□ 0.2
TPM1-201ENST00000267996 ZYG11AQ6WRX3 759 aa16.3■□□□□ 0.2
TPM1-201ENST00000267996 TBC1D1Q86TI0 1168 aaPredicted RBP16.3■□□□□ 0.2
TPM1-201ENST00000267996 SFTPA1Q8IWL2 248 aa16.3■□□□□ 0.2
TPM1-201ENST00000267996 FSTL5Q8N475 847 aaPredicted RBP16.3■□□□□ 0.2
TPM1-201ENST00000267996 SMRP1Q8NCR6 262 aa16.3■□□□□ 0.2
TPM1-201ENST00000267996 HEXDCQ8WVB3 486 aa16.3■□□□□ 0.2
TPM1-201ENST00000267996 SUSD6Q92537 303 aa16.3■□□□□ 0.2
TPM1-201ENST00000267996 NECTIN4Q96NY8 510 aa16.3■□□□□ 0.2
TPM1-201ENST00000267996 BIRC8Q96P09 236 aa16.3■□□□□ 0.2
TPM1-201ENST00000267996 TRMT61BQ9BVS5 477 aaKnown RBP16.3■□□□□ 0.2
TPM1-201ENST00000267996 GPAMQ9HCL2 828 aa16.3■□□□□ 0.2
TPM1-201ENST00000267996 B4GALT6Q9UBX8 382 aa16.3■□□□□ 0.2
TPM1-201ENST00000267996 BRWD1Q9NSI6 2320 aa16.29■□□□□ 0.2
TPM1-201ENST00000267996 EDDM13A0A1B0GTR0 161 aa16.29■□□□□ 0.2
TPM1-201ENST00000267996 AGAP14A8MT82 685 aa16.29■□□□□ 0.2
TPM1-201ENST00000267996 UPK3BL1B0FP48 263 aa16.29■□□□□ 0.2
TPM1-201ENST00000267996 UPK3BL2E5RIL1 263 aa16.29■□□□□ 0.2
TPM1-201ENST00000267996 DNAJC6O75061 913 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 392.8 ms