RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 DOCK6Q96HP0 2047 aa9.3□□□□□ -0.92
SSR3-201ENST00000265044 MKI67P46013 3256 aaKnown RBP9.3□□□□□ -0.92
SSR3-201ENST00000265044 PGLSO95336 258 aa9.3□□□□□ -0.92
SSR3-201ENST00000265044 ELFN1P0C7U0 828 aa9.3□□□□□ -0.92
SSR3-201ENST00000265044 MSH3P20585 1137 aa9.3□□□□□ -0.92
SSR3-201ENST00000265044 SETMARQ53H47 684 aaPredicted RBP9.3□□□□□ -0.92
SSR3-201ENST00000265044 LIPMQ5VYY2 423 aa9.3□□□□□ -0.92
SSR3-201ENST00000265044 NCEH1Q6PIU2 408 aa9.3□□□□□ -0.92
SSR3-201ENST00000265044 PIGWQ7Z7B1 504 aa9.3□□□□□ -0.92
SSR3-201ENST00000265044 ADGRD2Q7Z7M1 963 aa9.3□□□□□ -0.92
SSR3-201ENST00000265044 SERPINA9Q86WD7 417 aa9.3□□□□□ -0.92
SSR3-201ENST00000265044 ZNF683Q8IZ20 524 aa9.3□□□□□ -0.92
SSR3-201ENST00000265044 CPXM2Q8N436 756 aa9.3□□□□□ -0.92
SSR3-201ENST00000265044 CLDN19Q8N6F1 224 aa9.3□□□□□ -0.92
SSR3-201ENST00000265044 PCDH20Q8N6Y1 951 aaKnown RBP9.3□□□□□ -0.92
SSR3-201ENST00000265044 PTGR2Q8N8N7 351 aaPredicted RBP9.3□□□□□ -0.92
SSR3-201ENST00000265044 C2CD4AQ8NCU7 369 aaPredicted RBP9.3□□□□□ -0.92
SSR3-201ENST00000265044 ACVR1CQ8NER5 493 aa9.3□□□□□ -0.92
SSR3-201ENST00000265044 STAG3L4Q8TBR4 150 aa9.3□□□□□ -0.92
SSR3-201ENST00000265044 SMARCD2Q92925 531 aa9.3□□□□□ -0.92
SSR3-201ENST00000265044 OTUB2Q96DC9 234 aa9.3□□□□□ -0.92
SSR3-201ENST00000265044 ZNF419Q96HQ0 510 aaPredicted RBP9.3□□□□□ -0.92
SSR3-201ENST00000265044 WRAP53Q9BUR4 548 aaKnown RBP9.3□□□□□ -0.92
SSR3-201ENST00000265044 ARNT2Q9HBZ2 717 aa9.3□□□□□ -0.92
SSR3-201ENST00000265044 MRM3Q9HC36 420 aaKnown RBP9.3□□□□□ -0.92
SSR3-201ENST00000265044 LOC285095A0A1B0GVY8 99 aa9.29□□□□□ -0.92
SSR3-201ENST00000265044 SYCE1LA8MT33 242 aa9.29□□□□□ -0.92
SSR3-201ENST00000265044 FCHO1O14526 889 aa9.29□□□□□ -0.92
SSR3-201ENST00000265044 NIPSNAP2O75323 286 aa9.29□□□□□ -0.92
SSR3-201ENST00000265044 H2AFYO75367 372 aaKnown RBP9.29□□□□□ -0.92
SSR3-201ENST00000265044 SRCP12931 536 aa9.29□□□□□ -0.92
SSR3-201ENST00000265044 SPAM1P38567 509 aa9.29□□□□□ -0.92
SSR3-201ENST00000265044 CORO7P57737 925 aa9.29□□□□□ -0.92
SSR3-201ENST00000265044 PRKAA1Q13131 559 aa9.29□□□□□ -0.92
SSR3-201ENST00000265044 MPP7Q5T2T1 576 aa9.29□□□□□ -0.92
SSR3-201ENST00000265044 GDPD4Q6W3E5 623 aa9.29□□□□□ -0.92
SSR3-201ENST00000265044 SLC22A9Q8IVM8 553 aa9.29□□□□□ -0.92
SSR3-201ENST00000265044 CPA6Q8N4T0 437 aa9.29□□□□□ -0.92
SSR3-201ENST00000265044 LINGO1Q96FE5 620 aa9.29□□□□□ -0.92
SSR3-201ENST00000265044 GATA5Q9BWX5 397 aaPredicted RBP9.29□□□□□ -0.92
SSR3-201ENST00000265044 KDM4CQ9H3R0 1056 aa9.29□□□□□ -0.92
SSR3-201ENST00000265044 RC3H2Q9HBD1 1191 aaKnown RBP9.29□□□□□ -0.92
SSR3-201ENST00000265044 EURLQ9NYK6 297 aa9.29□□□□□ -0.92
SSR3-201ENST00000265044 NEU3Q9UQ49 428 aa9.29□□□□□ -0.92
SSR3-201ENST00000265044 CDYLQ9Y232 598 aa9.29□□□□□ -0.92
SSR3-201ENST00000265044 H3BNC9 293 aa9.29□□□□□ -0.92
SSR3-201ENST00000265044 INPP4BO15327 924 aa9.29□□□□□ -0.92
SSR3-201ENST00000265044 LDB2O43679 373 aa9.29□□□□□ -0.92
SSR3-201ENST00000265044 TULP3O75386 442 aa9.29□□□□□ -0.92
SSR3-201ENST00000265044 DLDP09622 509 aaKnown RBP9.29□□□□□ -0.92
SSR3-201ENST00000265044 COL6A2P12110 1019 aa9.29□□□□□ -0.92
SSR3-201ENST00000265044 CACNG1Q06432 222 aa9.29□□□□□ -0.92
SSR3-201ENST00000265044 TNK2Q07912 1038 aa9.29□□□□□ -0.92
SSR3-201ENST00000265044 PAQR3Q6TCH7 311 aa9.29□□□□□ -0.92
SSR3-201ENST00000265044 NAPRTQ6XQN6 538 aa9.29□□□□□ -0.92
SSR3-201ENST00000265044 DSG4Q86SJ6 1040 aa9.29□□□□□ -0.92
SSR3-201ENST00000265044 TMC8Q8IU68 726 aa9.29□□□□□ -0.92
SSR3-201ENST00000265044 CEP97Q8IW35 865 aa9.29□□□□□ -0.92
SSR3-201ENST00000265044 RBFAQ8N0V3 343 aa9.29□□□□□ -0.92
SSR3-201ENST00000265044 NKAPQ8N5F7 415 aaKnown RBP9.29□□□□□ -0.92
SSR3-201ENST00000265044 OR8D1Q8WZ84 308 aa9.29□□□□□ -0.92
SSR3-201ENST00000265044 MOCOSQ96EN8 888 aa9.29□□□□□ -0.92
SSR3-201ENST00000265044 KXD1Q9BQD3 176 aa9.29□□□□□ -0.92
SSR3-201ENST00000265044 WWOXQ9NZC7 414 aa9.29□□□□□ -0.92
SSR3-201ENST00000265044 ANKRD12Q6UB98 2062 aa9.29□□□□□ -0.92
SSR3-201ENST00000265044 IQCF5A8MTL0 148 aa9.29□□□□□ -0.92
SSR3-201ENST00000265044 TTC34A8MYJ7 566 aa9.29□□□□□ -0.92
SSR3-201ENST00000265044 B2RBV5 119 aa9.29□□□□□ -0.92
SSR3-201ENST00000265044 SLC25A14O95258 325 aaPredicted RBP9.29□□□□□ -0.92
SSR3-201ENST00000265044 PROCP04070 461 aa9.29□□□□□ -0.92
SSR3-201ENST00000265044 ATXN1LP0C7T5 689 aaKnown RBP9.29□□□□□ -0.92
SSR3-201ENST00000265044 OGNP20774 298 aaKnown RBP9.29□□□□□ -0.92
SSR3-201ENST00000265044 MAP4P27816 1152 aaKnown RBP9.29□□□□□ -0.92
SSR3-201ENST00000265044 CASP2P42575 452 aa9.29□□□□□ -0.92
SSR3-201ENST00000265044 ZXDBP98169 803 aa9.29□□□□□ -0.92
SSR3-201ENST00000265044 GTF2H3Q13889 308 aa9.29□□□□□ -0.92
SSR3-201ENST00000265044 GPSM1Q86YR5 675 aa9.29□□□□□ -0.92
SSR3-201ENST00000265044 TIFAQ96CG3 184 aa9.29□□□□□ -0.92
SSR3-201ENST00000265044 TMEM237Q96Q45 408 aa9.29□□□□□ -0.92
SSR3-201ENST00000265044 TCF12Q99081 682 aa9.29□□□□□ -0.92
SSR3-201ENST00000265044 PBX4Q9BYU1 374 aa9.29□□□□□ -0.92
SSR3-201ENST00000265044 SEMA4BQ9NPR2 832 aaPredicted RBP9.29□□□□□ -0.92
SSR3-201ENST00000265044 CDH22Q9UJ99 828 aa9.29□□□□□ -0.92
SSR3-201ENST00000265044 ATG2BQ96BY7 2078 aa9.29□□□□□ -0.92
SSR3-201ENST00000265044 ZBTB14O43829 449 aa9.28□□□□□ -0.92
SSR3-201ENST00000265044 LILRB3O75022 631 aa9.28□□□□□ -0.92
SSR3-201ENST00000265044 PEX11BO96011 259 aa9.28□□□□□ -0.92
SSR3-201ENST00000265044 OR56A5P0C7T3 313 aa9.28□□□□□ -0.92
SSR3-201ENST00000265044 HNF1BP35680 557 aa9.28□□□□□ -0.92
SSR3-201ENST00000265044 MAGEA9P43362 315 aa9.28□□□□□ -0.92
SSR3-201ENST00000265044 STC1P52823 247 aa9.28□□□□□ -0.92
SSR3-201ENST00000265044 ART3Q13508 389 aa9.28□□□□□ -0.92
SSR3-201ENST00000265044 ARL13AQ5H913 290 aaPredicted RBP9.28□□□□□ -0.92
SSR3-201ENST00000265044 LRRC66Q68CR7 880 aa9.28□□□□□ -0.92
SSR3-201ENST00000265044 CERS6Q6ZMG9 384 aa9.28□□□□□ -0.92
SSR3-201ENST00000265044 CPNE9Q8IYJ1 553 aa9.28□□□□□ -0.92
SSR3-201ENST00000265044 ADGRG2Q8IZP9 1017 aa9.28□□□□□ -0.92
SSR3-201ENST00000265044 FITM2Q8N6M3 262 aa9.28□□□□□ -0.92
SSR3-201ENST00000265044 CHST14Q8NCH0 376 aa9.28□□□□□ -0.92
SSR3-201ENST00000265044 MDGA1Q8NFP4 955 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms