RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 MRASO14807 208 aa16.27■□□□□ 0.2
CTCF-201ENST00000264010 IGLV3-25P01717 112 aa16.27■□□□□ 0.2
CTCF-201ENST00000264010 TSPAN8P19075 237 aa16.27■□□□□ 0.2
CTCF-201ENST00000264010 ITGAXP20702 1163 aa16.27■□□□□ 0.2
CTCF-201ENST00000264010 LPOP22079 712 aaPredicted RBP16.27■□□□□ 0.2
CTCF-201ENST00000264010 RGS4P49798 205 aa16.27■□□□□ 0.2
CTCF-201ENST00000264010 RNF219Q5W0B1 726 aaPredicted RBP16.27■□□□□ 0.2
CTCF-201ENST00000264010 CEP97Q8IW35 865 aa16.27■□□□□ 0.2
CTCF-201ENST00000264010 ELMOD1Q8N336 334 aa16.27■□□□□ 0.2
CTCF-201ENST00000264010 NKAPQ8N5F7 415 aaKnown RBP16.27■□□□□ 0.2
CTCF-201ENST00000264010 ASIC4Q96FT7 647 aa16.27■□□□□ 0.2
CTCF-201ENST00000264010 RIC8BQ9NVN3 520 aa16.27■□□□□ 0.2
CTCF-201ENST00000264010 DAPK2Q9UIK4 370 aa16.27■□□□□ 0.2
CTCF-201ENST00000264010 TRIP12Q14669 1992 aaPredicted RBP16.27■□□□□ 0.2
CTCF-201ENST00000264010 GM2AP17900 193 aa16.27■□□□□ 0.19
CTCF-201ENST00000264010 CORO1AP31146 461 aaKnown RBP16.27■□□□□ 0.19
CTCF-201ENST00000264010 KCNQ1P51787 676 aa16.27■□□□□ 0.19
CTCF-201ENST00000264010 PGGT1BP53609 377 aa16.27■□□□□ 0.19
CTCF-201ENST00000264010 CLYBLQ8N0X4 340 aa16.27■□□□□ 0.19
CTCF-201ENST00000264010 SLAIN1Q8ND83 568 aa16.27■□□□□ 0.19
CTCF-201ENST00000264010 CAPNS2Q96L46 248 aa16.27■□□□□ 0.19
CTCF-201ENST00000264010 ECSITQ9BQ95 431 aa16.27■□□□□ 0.19
CTCF-201ENST00000264010 CROTQ9UKG9 612 aa16.27■□□□□ 0.19
CTCF-201ENST00000264010 BLOC1S6Q9UL45 172 aa16.27■□□□□ 0.19
CTCF-201ENST00000264010 POMPQ9Y244 141 aa16.27■□□□□ 0.19
CTCF-201ENST00000264010 OR51F1A6NGY5 319 aa16.26■□□□□ 0.19
CTCF-201ENST00000264010 NCF1BA6NI72 391 aaPredicted RBP16.26■□□□□ 0.19
CTCF-201ENST00000264010 NCF1CA8MVU1 366 aaPredicted RBP16.26■□□□□ 0.19
CTCF-201ENST00000264010 PRAMEF11O60813 436 aa16.26■□□□□ 0.19
CTCF-201ENST00000264010 AMHP03971 560 aa16.26■□□□□ 0.19
CTCF-201ENST00000264010 NCF1P14598 390 aaPredicted RBP16.26■□□□□ 0.19
CTCF-201ENST00000264010 DSC1Q08554 894 aa16.26■□□□□ 0.19
CTCF-201ENST00000264010 PTPRNQ16849 979 aa16.26■□□□□ 0.19
CTCF-201ENST00000264010 BHLHA9Q7RTU4 235 aa16.26■□□□□ 0.19
CTCF-201ENST00000264010 CLEC14AQ86T13 490 aa16.26■□□□□ 0.19
CTCF-201ENST00000264010 CILP2Q8IUL8 1156 aa16.26■□□□□ 0.19
CTCF-201ENST00000264010 SEZ6LQ9BYH1 1024 aa16.26■□□□□ 0.19
CTCF-201ENST00000264010 ELAC1Q9H777 363 aaKnown RBP16.26■□□□□ 0.19
CTCF-201ENST00000264010 LRRC37A2A6NM11 1700 aa16.26■□□□□ 0.19
CTCF-201ENST00000264010 MAGEA12P43365 314 aa16.26■□□□□ 0.19
CTCF-201ENST00000264010 HABP4Q5JVS0 413 aaKnown RBP16.26■□□□□ 0.19
CTCF-201ENST00000264010 RETSATQ6NUM9 610 aa16.26■□□□□ 0.19
CTCF-201ENST00000264010 TRAF7Q6Q0C0 670 aa16.26■□□□□ 0.19
CTCF-201ENST00000264010 KDELC1Q6UW63 502 aa16.26■□□□□ 0.19
CTCF-201ENST00000264010 SATL1Q86VE3 508 aa16.26■□□□□ 0.19
CTCF-201ENST00000264010 OR4K2Q8NGD2 314 aa16.26■□□□□ 0.19
CTCF-201ENST00000264010 HACD3Q9P035 362 aa16.26■□□□□ 0.19
CTCF-201ENST00000264010 CCDC162PA2VCL2 907 aa16.26■□□□□ 0.19
CTCF-201ENST00000264010 CYBBP04839 570 aa16.26■□□□□ 0.19
CTCF-201ENST00000264010 SNRPB2P08579 225 aaKnown RBP16.26■□□□□ 0.19
CTCF-201ENST00000264010 OGNP20774 298 aaKnown RBP16.26■□□□□ 0.19
CTCF-201ENST00000264010 CCR10P46092 362 aa16.26■□□□□ 0.19
CTCF-201ENST00000264010 LEPRP48357 1165 aaKnown RBP16.26■□□□□ 0.19
CTCF-201ENST00000264010 CCNG1P51959 295 aa16.26■□□□□ 0.19
CTCF-201ENST00000264010 CDH13P55290 713 aa16.26■□□□□ 0.19
CTCF-201ENST00000264010 PSME3P61289 254 aa16.26■□□□□ 0.19
CTCF-201ENST00000264010 ATP6V0D1P61421 351 aa16.26■□□□□ 0.19
CTCF-201ENST00000264010 CNTN4Q8IWV2 1026 aa16.26■□□□□ 0.19
CTCF-201ENST00000264010 PCDH20Q8N6Y1 951 aaKnown RBP16.26■□□□□ 0.19
CTCF-201ENST00000264010 ACVR1CQ8NER5 493 aa16.26■□□□□ 0.19
CTCF-201ENST00000264010 OR6Y1Q8NGX8 325 aa16.26■□□□□ 0.19
CTCF-201ENST00000264010 FBXO27Q8NI29 283 aa16.26■□□□□ 0.19
CTCF-201ENST00000264010 DLG3Q92796 817 aa16.26■□□□□ 0.19
CTCF-201ENST00000264010 TMEM175Q9BSA9 504 aa16.26■□□□□ 0.19
CTCF-201ENST00000264010 IL1RL2Q9HB29 575 aa16.26■□□□□ 0.19
CTCF-201ENST00000264010 AURKCQ9UQB9 309 aa16.26■□□□□ 0.19
CTCF-201ENST00000264010 BTN3A1O00481 513 aa16.26■□□□□ 0.19
CTCF-201ENST00000264010 NR5A2O00482 541 aa16.26■□□□□ 0.19
CTCF-201ENST00000264010 AOC2O75106 756 aa16.26■□□□□ 0.19
CTCF-201ENST00000264010 ABL2P42684 1182 aa16.26■□□□□ 0.19
CTCF-201ENST00000264010 TTPAP49638 278 aa16.26■□□□□ 0.19
CTCF-201ENST00000264010 NME5P56597 212 aa16.26■□□□□ 0.19
CTCF-201ENST00000264010 C21orf59P57076 290 aa16.26■□□□□ 0.19
CTCF-201ENST00000264010 DNAJB13P59910 316 aa16.26■□□□□ 0.19
CTCF-201ENST00000264010 MRPS22P82650 360 aaKnown RBP16.26■□□□□ 0.19
CTCF-201ENST00000264010 TBC1D25Q3MII6 688 aa16.26■□□□□ 0.19
CTCF-201ENST00000264010 TMEM198Q66K66 360 aa16.26■□□□□ 0.19
CTCF-201ENST00000264010 PGAM4Q8N0Y7 254 aa16.26■□□□□ 0.19
CTCF-201ENST00000264010 TTC9BQ8N6N2 239 aa16.26■□□□□ 0.19
CTCF-201ENST00000264010 MRPS31Q92665 395 aaKnown RBP16.26■□□□□ 0.19
CTCF-201ENST00000264010 SLC39A13Q96H72 371 aa16.26■□□□□ 0.19
CTCF-201ENST00000264010 ZBTB18Q99592 522 aa16.26■□□□□ 0.19
CTCF-201ENST00000264010 ARL5AQ9Y689 179 aa16.26■□□□□ 0.19
CTCF-201ENST00000264010 DOCK3Q8IZD9 2030 aa16.25■□□□□ 0.19
CTCF-201ENST00000264010 A8MT66 165 aa16.25■□□□□ 0.19
CTCF-201ENST00000264010 CCNT2O60583 730 aaKnown RBP16.25■□□□□ 0.19
CTCF-201ENST00000264010 TSPAN9O75954 239 aa16.25■□□□□ 0.19
CTCF-201ENST00000264010 EPOP01588 193 aa16.25■□□□□ 0.19
CTCF-201ENST00000264010 SERPINB1P30740 379 aa16.25■□□□□ 0.19
CTCF-201ENST00000264010 HERC3Q15034 1050 aa16.25■□□□□ 0.19
CTCF-201ENST00000264010 GSTA3Q16772 222 aa16.25■□□□□ 0.19
CTCF-201ENST00000264010 DDI1Q8WTU0 396 aa16.25■□□□□ 0.19
CTCF-201ENST00000264010 LZICQ8WZA0 190 aa16.25■□□□□ 0.19
CTCF-201ENST00000264010 NRBF2Q96F24 287 aa16.25■□□□□ 0.19
CTCF-201ENST00000264010 CLPBQ9H078 707 aa16.25■□□□□ 0.19
CTCF-201ENST00000264010 NDUFA13Q9P0J0 144 aa16.25■□□□□ 0.19
CTCF-201ENST00000264010 AK5Q9Y6K8 562 aa16.25■□□□□ 0.19
CTCF-201ENST00000264010 A0A1B0GVM2 712 aa16.25■□□□□ 0.19
CTCF-201ENST00000264010 TCAF2A6NFQ2 919 aa16.25■□□□□ 0.19
CTCF-201ENST00000264010 INSIG1O15503 277 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms