RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 OSBPL6Q9BZF3 934 aa9.71□□□□□ -0.85
SNRNP40-201ENST00000263694 ABCG8Q9H221 673 aa9.71□□□□□ -0.85
SNRNP40-201ENST00000263694 VIPAS39Q9H9C1 493 aa9.71□□□□□ -0.85
SNRNP40-201ENST00000263694 IL26Q9NPH9 171 aa9.71□□□□□ -0.85
SNRNP40-201ENST00000263694 VPS18Q9P253 973 aa9.71□□□□□ -0.85
SNRNP40-201ENST00000263694 EBF1Q9UH73 591 aa9.71□□□□□ -0.85
SNRNP40-201ENST00000263694 RIMKLBQ9ULI2 386 aa9.71□□□□□ -0.85
SNRNP40-201ENST00000263694 SIT1Q9Y3P8 196 aa9.71□□□□□ -0.85
SNRNP40-201ENST00000263694 CACNA1IQ9P0X4 2223 aa9.71□□□□□ -0.85
SNRNP40-201ENST00000263694 TTC28Q96AY4 2481 aa9.71□□□□□ -0.85
SNRNP40-201ENST00000263694 PLXNB3Q9ULL4 1909 aa9.71□□□□□ -0.85
SNRNP40-201ENST00000263694 IGLON5A6NGN9 336 aa9.71□□□□□ -0.86
SNRNP40-201ENST00000263694 FAM47DPA6NHR8 397 aa9.71□□□□□ -0.86
SNRNP40-201ENST00000263694 CD3EAPO15446 510 aaKnown RBP9.71□□□□□ -0.86
SNRNP40-201ENST00000263694 SLC7A4O43246 635 aa9.71□□□□□ -0.86
SNRNP40-201ENST00000263694 PCDH8O95206 1070 aa9.71□□□□□ -0.86
SNRNP40-201ENST00000263694 ELFN1P0C7U0 828 aa9.71□□□□□ -0.86
SNRNP40-201ENST00000263694 ACADMP11310 421 aa9.71□□□□□ -0.86
SNRNP40-201ENST00000263694 PAMP19021 973 aa9.71□□□□□ -0.86
SNRNP40-201ENST00000263694 PSMA3P25788 255 aa9.71□□□□□ -0.86
SNRNP40-201ENST00000263694 GABRB3P28472 473 aa9.71□□□□□ -0.86
SNRNP40-201ENST00000263694 SLC1A2P43004 574 aa9.71□□□□□ -0.86
SNRNP40-201ENST00000263694 MSH2P43246 934 aa9.71□□□□□ -0.86
SNRNP40-201ENST00000263694 SPINT3P49223 89 aa9.71□□□□□ -0.86
SNRNP40-201ENST00000263694 TPMTP51580 245 aa9.71□□□□□ -0.86
SNRNP40-201ENST00000263694 PDE1BQ01064 536 aa9.71□□□□□ -0.86
SNRNP40-201ENST00000263694 MTAPQ13126 283 aa9.71□□□□□ -0.86
SNRNP40-201ENST00000263694 LAMB3Q13751 1172 aa9.71□□□□□ -0.86
SNRNP40-201ENST00000263694 THOC5Q13769 683 aaKnown RBP9.71□□□□□ -0.86
SNRNP40-201ENST00000263694 CHRNA6Q15825 494 aa9.71□□□□□ -0.86
SNRNP40-201ENST00000263694 TMEM52BQ4KMG9 183 aa9.71□□□□□ -0.86
SNRNP40-201ENST00000263694 ZRANB3Q5FWF4 1079 aa9.71□□□□□ -0.86
SNRNP40-201ENST00000263694 ZNF470Q6ECI4 717 aa9.71□□□□□ -0.86
SNRNP40-201ENST00000263694 ANO7Q6IWH7 933 aa9.71□□□□□ -0.86
SNRNP40-201ENST00000263694 PSAPL1Q6NUJ1 521 aa9.71□□□□□ -0.86
SNRNP40-201ENST00000263694 CYS1Q717R9 158 aa9.71□□□□□ -0.86
SNRNP40-201ENST00000263694 STRA8Q7Z7C7 330 aa9.71□□□□□ -0.86
SNRNP40-201ENST00000263694 PIANPQ8IYJ0 282 aa9.71□□□□□ -0.86
SNRNP40-201ENST00000263694 PELI3Q8N2H9 469 aa9.71□□□□□ -0.86
SNRNP40-201ENST00000263694 OTUD6BQ8N6M0 293 aa9.71□□□□□ -0.86
SNRNP40-201ENST00000263694 FRMD1Q8N878 549 aa9.71□□□□□ -0.86
SNRNP40-201ENST00000263694 OR4L1Q8NH43 312 aa9.71□□□□□ -0.86
SNRNP40-201ENST00000263694 OR14C36Q8NHC7 312 aa9.71□□□□□ -0.86
SNRNP40-201ENST00000263694 DCAKDQ8WVC6 231 aa9.71□□□□□ -0.86
SNRNP40-201ENST00000263694 CLDN23Q96B33 292 aa9.71□□□□□ -0.86
SNRNP40-201ENST00000263694 ARL8AQ96BM9 186 aa9.71□□□□□ -0.86
SNRNP40-201ENST00000263694 CCDC97Q96F63 343 aaPredicted RBP9.71□□□□□ -0.86
SNRNP40-201ENST00000263694 ATXN7L3BQ96GX2 97 aa9.71□□□□□ -0.86
SNRNP40-201ENST00000263694 CCDC77Q9BR77 488 aa9.71□□□□□ -0.86
SNRNP40-201ENST00000263694 TPSD1Q9BZJ3 242 aa9.71□□□□□ -0.86
SNRNP40-201ENST00000263694 MFSD1Q9H3U5 465 aa9.71□□□□□ -0.86
SNRNP40-201ENST00000263694 POLMQ9NP87 494 aaPredicted RBP9.71□□□□□ -0.86
SNRNP40-201ENST00000263694 FBXO6Q9NRD1 293 aaPredicted RBP9.71□□□□□ -0.86
SNRNP40-201ENST00000263694 ZFATQ9P243 1243 aa9.71□□□□□ -0.86
SNRNP40-201ENST00000263694 BCCIPQ9P287 314 aaKnown RBP eCLIP9.71□□□□□ -0.86
SNRNP40-201ENST00000263694 ZNF106Q9H2Y7 1883 aaKnown RBP9.7□□□□□ -0.86
SNRNP40-201ENST00000263694 LZTS3O60299 673 aaPredicted RBP9.7□□□□□ -0.86
SNRNP40-201ENST00000263694 HAUS5O94927 633 aa9.7□□□□□ -0.86
SNRNP40-201ENST00000263694 SYF2O95926 243 aaKnown RBP9.7□□□□□ -0.86
SNRNP40-201ENST00000263694 AHSGP02765 367 aa9.7□□□□□ -0.86
SNRNP40-201ENST00000263694 C6P13671 934 aa9.7□□□□□ -0.86
SNRNP40-201ENST00000263694 ZNF30P17039 623 aa9.7□□□□□ -0.86
SNRNP40-201ENST00000263694 FOXN2P32314 431 aa9.7□□□□□ -0.86
SNRNP40-201ENST00000263694 ACSL1P33121 698 aa9.7□□□□□ -0.86
SNRNP40-201ENST00000263694 HADHAP40939 763 aa9.7□□□□□ -0.86
SNRNP40-201ENST00000263694 DGKEP52429 567 aa9.7□□□□□ -0.86
SNRNP40-201ENST00000263694 PGGT1BP53609 377 aa9.7□□□□□ -0.86
SNRNP40-201ENST00000263694 PPARDQ03181 441 aa9.7□□□□□ -0.86
SNRNP40-201ENST00000263694 SIGLEC14Q08ET2 396 aa9.7□□□□□ -0.86
SNRNP40-201ENST00000263694 ELP6Q0PNE2 266 aa9.7□□□□□ -0.86
SNRNP40-201ENST00000263694 BMPR2Q13873 1038 aa9.7□□□□□ -0.86
SNRNP40-201ENST00000263694 FRG1Q14331 258 aaKnown RBP9.7□□□□□ -0.86
SNRNP40-201ENST00000263694 TMED2Q15363 201 aa9.7□□□□□ -0.86
SNRNP40-201ENST00000263694 KLHL38Q2WGJ6 581 aa9.7□□□□□ -0.86
SNRNP40-201ENST00000263694 SEL1L3Q68CR1 1132 aa9.7□□□□□ -0.86
SNRNP40-201ENST00000263694 CWF19L1Q69YN2 538 aaKnown RBP9.7□□□□□ -0.86
SNRNP40-201ENST00000263694 KDM7AQ6ZMT4 941 aa9.7□□□□□ -0.86
SNRNP40-201ENST00000263694 MARK2Q7KZI7 788 aaKnown RBP9.7□□□□□ -0.86
SNRNP40-201ENST00000263694 TAS2R42Q7RTR8 314 aa9.7□□□□□ -0.86
SNRNP40-201ENST00000263694 TECPR1Q7Z6L1 1165 aa9.7□□□□□ -0.86
SNRNP40-201ENST00000263694 LRRC6Q86X45 466 aa9.7□□□□□ -0.86
SNRNP40-201ENST00000263694 ACVR1CQ8NER5 493 aa9.7□□□□□ -0.86
SNRNP40-201ENST00000263694 TSTD1Q8NFU3 115 aa9.7□□□□□ -0.86
SNRNP40-201ENST00000263694 CXorf40AQ8TE69 158 aa9.7□□□□□ -0.86
SNRNP40-201ENST00000263694 SLC44A1Q8WWI5 657 aa9.7□□□□□ -0.86
SNRNP40-201ENST00000263694 RLN3Q8WXF3 142 aa9.7□□□□□ -0.86
SNRNP40-201ENST00000263694 EDAQ92838 391 aa9.7□□□□□ -0.86
SNRNP40-201ENST00000263694 COQ10AQ96MF6 247 aa9.7□□□□□ -0.86
SNRNP40-201ENST00000263694 SRPK1Q96SB4 655 aaKnown RBP9.7□□□□□ -0.86
SNRNP40-201ENST00000263694 RUFY1Q96T51 708 aa9.7□□□□□ -0.86
SNRNP40-201ENST00000263694 DHRS4Q9BTZ2 278 aa9.7□□□□□ -0.86
SNRNP40-201ENST00000263694 RIOK2Q9BVS4 552 aaKnown RBP9.7□□□□□ -0.86
SNRNP40-201ENST00000263694 CHRDQ9H2X0 955 aa9.7□□□□□ -0.86
SNRNP40-201ENST00000263694 FBRSQ9HAH7 460 aa9.7□□□□□ -0.86
SNRNP40-201ENST00000263694 CATSPERZQ9NTU4 200 aa9.7□□□□□ -0.86
SNRNP40-201ENST00000263694 PKD2L2Q9NZM6 624 aa9.7□□□□□ -0.86
SNRNP40-201ENST00000263694 CYP8B1Q9UNU6 501 aa9.7□□□□□ -0.86
SNRNP40-201ENST00000263694 ZFR2Q9UPR6 939 aaKnown RBP9.7□□□□□ -0.86
SNRNP40-201ENST00000263694 INVSQ9Y283 1065 aa9.7□□□□□ -0.86
SNRNP40-201ENST00000263694 PLXNA2O75051 1894 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms