RNA–Protein interactions for RNA: ENST00000254940.9

NIP7-201, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIP7, Length 2,402 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-201ENST00000254940 STEAP4Q687X5 459 aa12.1□□□□□ -0.47
NIP7-201ENST00000254940 ZCCHC23Q6ZST2 131 aa12.1□□□□□ -0.47
NIP7-201ENST00000254940 TSTD1Q8NFU3 115 aa12.1□□□□□ -0.47
NIP7-201ENST00000254940 ZNF75CPQ92670 426 aaPredicted RBP12.1□□□□□ -0.47
NIP7-201ENST00000254940 ISG20Q96AZ6 181 aaKnown RBP12.1□□□□□ -0.47
NIP7-201ENST00000254940 SUDS3Q9H7L9 328 aaPredicted RBP12.1□□□□□ -0.47
NIP7-201ENST00000254940 IARS2Q9NSE4 1012 aaKnown RBP12.1□□□□□ -0.47
NIP7-201ENST00000254940 EBF1Q9UH73 591 aa12.1□□□□□ -0.47
NIP7-201ENST00000254940 CD84Q9UIB8 345 aa12.1□□□□□ -0.47
NIP7-201ENST00000254940 LRRK1Q38SD2 2015 aa12.1□□□□□ -0.47
NIP7-201ENST00000254940 TRPM6Q9BX84 2022 aa12.09□□□□□ -0.47
NIP7-201ENST00000254940 NPIPB15A6NHN6 443 aaPredicted RBP12.09□□□□□ -0.47
NIP7-201ENST00000254940 TRAFD1O14545 582 aaPredicted RBP12.09□□□□□ -0.47
NIP7-201ENST00000254940 COPEO14579 308 aa12.09□□□□□ -0.47
NIP7-201ENST00000254940 DNAJC6O75061 913 aa12.09□□□□□ -0.47
NIP7-201ENST00000254940 KRT37O76014 449 aa12.09□□□□□ -0.47
NIP7-201ENST00000254940 ANXA9O76027 345 aa12.09□□□□□ -0.47
NIP7-201ENST00000254940 PGLSO95336 258 aa12.09□□□□□ -0.47
NIP7-201ENST00000254940 ATXN1LP0C7T5 689 aaKnown RBP12.09□□□□□ -0.47
NIP7-201ENST00000254940 TSHRP16473 764 aa12.09□□□□□ -0.47
NIP7-201ENST00000254940 ARNTP27540 789 aa12.09□□□□□ -0.47
NIP7-201ENST00000254940 NEK3P51956 506 aa12.09□□□□□ -0.47
NIP7-201ENST00000254940 AP1S1P61966 158 aa12.09□□□□□ -0.47
NIP7-201ENST00000254940 RAD51Q06609 339 aa12.09□□□□□ -0.47
NIP7-201ENST00000254940 NSUN2Q08J23 767 aaKnown RBP eCLIP12.09□□□□□ -0.47
NIP7-201ENST00000254940 CTBP1Q13363 440 aa12.09□□□□□ -0.47
NIP7-201ENST00000254940 ENPP2Q13822 863 aa12.09□□□□□ -0.47
NIP7-201ENST00000254940 PDK4Q16654 411 aa12.09□□□□□ -0.47
NIP7-201ENST00000254940 ZNF789Q5FWF6 425 aa12.09□□□□□ -0.47
NIP7-201ENST00000254940 EOGTQ5NDL2 527 aa12.09□□□□□ -0.47
NIP7-201ENST00000254940 FBXL19Q6PCT2 694 aa12.09□□□□□ -0.47
NIP7-201ENST00000254940 TMEM135Q86UB9 458 aa12.09□□□□□ -0.47
NIP7-201ENST00000254940 DENND6AQ8IWF6 608 aa12.09□□□□□ -0.47
NIP7-201ENST00000254940 OR2T3Q8NH03 318 aa12.09□□□□□ -0.47
NIP7-201ENST00000254940 SIPA1Q96FS4 1042 aa12.09□□□□□ -0.47
NIP7-201ENST00000254940 OMDQ99983 421 aa12.09□□□□□ -0.47
NIP7-201ENST00000254940 CD248Q9HCU0 757 aa12.09□□□□□ -0.47
NIP7-201ENST00000254940 C20orf96Q9NUD7 363 aaPredicted RBP12.09□□□□□ -0.47
NIP7-201ENST00000254940 FBXL12Q9NXK8 326 aa12.09□□□□□ -0.47
NIP7-201ENST00000254940 ARL5AQ9Y689 179 aa12.09□□□□□ -0.47
NIP7-201ENST00000254940 NEMP1O14524 444 aa12.09□□□□□ -0.47
NIP7-201ENST00000254940 GPR39O43194 453 aa12.09□□□□□ -0.47
NIP7-201ENST00000254940 ITGA2BP08514 1039 aa12.09□□□□□ -0.47
NIP7-201ENST00000254940 TIMP2P16035 220 aa12.09□□□□□ -0.47
NIP7-201ENST00000254940 XPAP23025 273 aaPredicted RBP12.09□□□□□ -0.47
NIP7-201ENST00000254940 DRD3P35462 400 aa12.09□□□□□ -0.47
NIP7-201ENST00000254940 SLC18A2Q05940 514 aa12.09□□□□□ -0.47
NIP7-201ENST00000254940 CNGA3Q16281 694 aa12.09□□□□□ -0.47
NIP7-201ENST00000254940 OTOAQ7RTW8 1153 aa12.09□□□□□ -0.47
NIP7-201ENST00000254940 STRA8Q7Z7C7 330 aa12.09□□□□□ -0.47
NIP7-201ENST00000254940 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.09□□□□□ -0.47
NIP7-201ENST00000254940 CCDC197Q8NCU1 140 aa12.09□□□□□ -0.47
NIP7-201ENST00000254940 PIH1D2Q8WWB5 315 aa12.09□□□□□ -0.47
NIP7-201ENST00000254940 FATE1Q969F0 183 aa12.09□□□□□ -0.47
NIP7-201ENST00000254940 APOPT1Q96IL0 206 aa12.09□□□□□ -0.47
NIP7-201ENST00000254940 C20orf27Q9GZN8 174 aa12.09□□□□□ -0.47
NIP7-201ENST00000254940 RSPH9Q9H1X1 276 aaPredicted RBP12.09□□□□□ -0.47
NIP7-201ENST00000254940 ABCG8Q9H221 673 aa12.09□□□□□ -0.47
NIP7-201ENST00000254940 PCDH12Q9NPG4 1184 aa12.09□□□□□ -0.47
NIP7-201ENST00000254940 SENP1Q9P0U3 644 aa12.09□□□□□ -0.47
NIP7-201ENST00000254940 SRRM3A6NNA2 597 aaPredicted RBP12.08□□□□□ -0.48
NIP7-201ENST00000254940 VAPBO95292 243 aa12.08□□□□□ -0.48
NIP7-201ENST00000254940 CLDN7O95471 211 aa12.08□□□□□ -0.48
NIP7-201ENST00000254940 GABRB3P28472 473 aa12.08□□□□□ -0.48
NIP7-201ENST00000254940 HNF1BP35680 557 aa12.08□□□□□ -0.48
NIP7-201ENST00000254940 P2RY2P41231 377 aa12.08□□□□□ -0.48
NIP7-201ENST00000254940 CDH17Q12864 832 aa12.08□□□□□ -0.48
NIP7-201ENST00000254940 PDE1CQ14123 709 aaPredicted RBP12.08□□□□□ -0.48
NIP7-201ENST00000254940 ZNF460Q14592 562 aa12.08□□□□□ -0.48
NIP7-201ENST00000254940 ZNF805Q5CZA5 627 aa12.08□□□□□ -0.48
NIP7-201ENST00000254940 TEDDM1Q5T9Z0 273 aa12.08□□□□□ -0.48
NIP7-201ENST00000254940 ZNF776Q68DI1 518 aaPredicted RBP12.08□□□□□ -0.48
NIP7-201ENST00000254940 LYSMD3Q7Z3D4 306 aa12.08□□□□□ -0.48
NIP7-201ENST00000254940 PLD6Q8N2A8 252 aaKnown RBP12.08□□□□□ -0.48
NIP7-201ENST00000254940 SPATA6LQ8N4H0 392 aa12.08□□□□□ -0.48
NIP7-201ENST00000254940 OR14C36Q8NHC7 312 aa12.08□□□□□ -0.48
NIP7-201ENST00000254940 LRRC8CQ8TDW0 803 aa12.08□□□□□ -0.48
NIP7-201ENST00000254940 TRIB3Q96RU7 358 aa12.08□□□□□ -0.48
NIP7-201ENST00000254940 LRRC40Q9H9A6 602 aa12.08□□□□□ -0.48
NIP7-201ENST00000254940 DYRK4Q9NR20 520 aa12.08□□□□□ -0.48
NIP7-201ENST00000254940 DCTN4Q9UJW0 460 aa12.08□□□□□ -0.48
NIP7-201ENST00000254940 MTO1Q9Y2Z2 717 aaKnown RBP12.08□□□□□ -0.48
NIP7-201ENST00000254940 AAR2Q9Y312 384 aaKnown RBP12.08□□□□□ -0.48
NIP7-201ENST00000254940 MMP20O60882 483 aa12.08□□□□□ -0.48
NIP7-201ENST00000254940 RNASEH1O60930 286 aaKnown RBP12.08□□□□□ -0.48
NIP7-201ENST00000254940 DNTTP04053 509 aa12.08□□□□□ -0.48
NIP7-201ENST00000254940 PRNPP04156 253 aa12.08□□□□□ -0.48
NIP7-201ENST00000254940 ALADP13716 330 aa12.08□□□□□ -0.48
NIP7-201ENST00000254940 ACSL1P33121 698 aa12.08□□□□□ -0.48
NIP7-201ENST00000254940 ARSDP51689 593 aa12.08□□□□□ -0.48
NIP7-201ENST00000254940 MPP1Q00013 466 aa12.08□□□□□ -0.48
NIP7-201ENST00000254940 IRF9Q00978 393 aa12.08□□□□□ -0.48
NIP7-201ENST00000254940 PDE1BQ01064 536 aa12.08□□□□□ -0.48
NIP7-201ENST00000254940 CBLBQ13191 982 aa12.08□□□□□ -0.48
NIP7-201ENST00000254940 MPP3Q13368 585 aa12.08□□□□□ -0.48
NIP7-201ENST00000254940 MSLNQ13421 630 aaPredicted RBP12.08□□□□□ -0.48
NIP7-201ENST00000254940 ALG1LQ6GMV1 187 aa12.08□□□□□ -0.48
NIP7-201ENST00000254940 RANBP10Q6VN20 620 aa12.08□□□□□ -0.48
NIP7-201ENST00000254940 ATG14Q6ZNE5 492 aa12.08□□□□□ -0.48
NIP7-201ENST00000254940 SPATA21Q7Z572 469 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms