RNA–Protein interactions for RNA: ENST00000246529.3

LRFN3-201, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN3, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-201ENST00000246529 TRMOQ9BU70 441 aa17.33■□□□□ 0.36
LRFN3-201ENST00000246529 NLE1Q9NVX2 485 aaPredicted RBP17.33■□□□□ 0.36
LRFN3-201ENST00000246529 C6orf203Q9P0P8 240 aaPredicted RBP17.33■□□□□ 0.36
LRFN3-201ENST00000246529 RIMS3Q9UJD0 308 aa17.33■□□□□ 0.36
LRFN3-201ENST00000246529 AK5Q9Y6K8 562 aa17.33■□□□□ 0.36
LRFN3-201ENST00000246529 TRIM38O00635 465 aa17.32■□□□□ 0.36
LRFN3-201ENST00000246529 KDELR3O43731 214 aa17.32■□□□□ 0.36
LRFN3-201ENST00000246529 RHOCP08134 193 aa17.32■□□□□ 0.36
LRFN3-201ENST00000246529 PITRM1Q5JRX3 1037 aa17.32■□□□□ 0.36
LRFN3-201ENST00000246529 BBS5Q8N3I7 341 aa17.32■□□□□ 0.36
LRFN3-201ENST00000246529 EFHBQ8N7U6 833 aa17.32■□□□□ 0.36
LRFN3-201ENST00000246529 ICA1LQ8NDH6 482 aa17.32■□□□□ 0.36
LRFN3-201ENST00000246529 LPGAT1Q92604 370 aa17.32■□□□□ 0.36
LRFN3-201ENST00000246529 LRGUKQ96M69 825 aa17.32■□□□□ 0.36
LRFN3-201ENST00000246529 RNF38Q9H0F5 515 aa17.32■□□□□ 0.36
LRFN3-201ENST00000246529 SCUBE2Q9NQ36 999 aa17.32■□□□□ 0.36
LRFN3-201ENST00000246529 BTRCQ9Y297 605 aa17.32■□□□□ 0.36
LRFN3-201ENST00000246529 ASB3Q9Y575 518 aa17.32■□□□□ 0.36
LRFN3-201ENST00000246529 EME2A4GXA9 379 aaPredicted RBP17.32■□□□□ 0.36
LRFN3-201ENST00000246529 NCF1BA6NI72 391 aaPredicted RBP17.32■□□□□ 0.36
LRFN3-201ENST00000246529 ENO4A6NNW6 628 aa17.32■□□□□ 0.36
LRFN3-201ENST00000246529 NCF1CA8MVU1 366 aaPredicted RBP17.32■□□□□ 0.36
LRFN3-201ENST00000246529 SUPT3HB4E1H0 165 aa17.32■□□□□ 0.36
LRFN3-201ENST00000246529 CDC7O00311 574 aa17.32■□□□□ 0.36
LRFN3-201ENST00000246529 PIP5K1BO14986 540 aa17.32■□□□□ 0.36
LRFN3-201ENST00000246529 GPR39O43194 453 aa17.32■□□□□ 0.36
LRFN3-201ENST00000246529 OR1I1O60431 355 aa17.32■□□□□ 0.36
LRFN3-201ENST00000246529 DNAJA2O60884 412 aa17.32■□□□□ 0.36
LRFN3-201ENST00000246529 SUPT3HO75486 399 aa17.32■□□□□ 0.36
LRFN3-201ENST00000246529 STC2O76061 302 aa17.32■□□□□ 0.36
LRFN3-201ENST00000246529 SRP72O76094 671 aaKnown RBP17.32■□□□□ 0.36
LRFN3-201ENST00000246529 CRTAMO95727 393 aa17.32■□□□□ 0.36
LRFN3-201ENST00000246529 SNRPB2P08579 225 aaKnown RBP17.32■□□□□ 0.36
LRFN3-201ENST00000246529 NCF1P14598 390 aaPredicted RBP17.32■□□□□ 0.36
LRFN3-201ENST00000246529 OGNP20774 298 aaKnown RBP17.32■□□□□ 0.36
LRFN3-201ENST00000246529 ECT2LQ008S8 904 aa17.32■□□□□ 0.36
LRFN3-201ENST00000246529 FOLH1Q04609 750 aa17.32■□□□□ 0.36
LRFN3-201ENST00000246529 STX5Q13190 355 aa17.32■□□□□ 0.36
LRFN3-201ENST00000246529 ADGRE1Q14246 886 aa17.32■□□□□ 0.36
LRFN3-201ENST00000246529 GRB7Q14451 532 aa17.32■□□□□ 0.36
LRFN3-201ENST00000246529 FUNDC1Q8IVP5 155 aa17.32■□□□□ 0.36
LRFN3-201ENST00000246529 PIANPQ8IYJ0 282 aa17.32■□□□□ 0.36
LRFN3-201ENST00000246529 CLYBLQ8N0X4 340 aa17.32■□□□□ 0.36
LRFN3-201ENST00000246529 ATP6V1E2Q96A05 226 aa17.32■□□□□ 0.36
LRFN3-201ENST00000246529 VN1R3Q9BXE9 311 aa17.32■□□□□ 0.36
LRFN3-201ENST00000246529 TDRD1Q9BXT4 1180 aaKnown RBP17.32■□□□□ 0.36
LRFN3-201ENST00000246529 UTP6Q9NYH9 597 aaKnown RBP17.32■□□□□ 0.36
LRFN3-201ENST00000246529 AGO1Q9UL18 857 aaKnown RBP17.32■□□□□ 0.36
LRFN3-201ENST00000246529 C2orf78A6NCI8 922 aa17.31■□□□□ 0.36
LRFN3-201ENST00000246529 PRORSD1PA6NEY8 169 aa17.31■□□□□ 0.36
LRFN3-201ENST00000246529 MRASO14807 208 aa17.31■□□□□ 0.36
LRFN3-201ENST00000246529 SNAP91O60641 907 aa17.31■□□□□ 0.36
LRFN3-201ENST00000246529 CR2P20023 1033 aa17.31■□□□□ 0.36
LRFN3-201ENST00000246529 LAMB3Q13751 1172 aa17.31■□□□□ 0.36
LRFN3-201ENST00000246529 TSNQ15631 228 aaKnown RBP17.31■□□□□ 0.36
LRFN3-201ENST00000246529 HECTD3Q5T447 861 aa17.31■□□□□ 0.36
LRFN3-201ENST00000246529 PSAPL1Q6NUJ1 521 aa17.31■□□□□ 0.36
LRFN3-201ENST00000246529 DDIASQ8IXT1 998 aa17.31■□□□□ 0.36
LRFN3-201ENST00000246529 CRIPAKQ8N1N5 446 aa17.31■□□□□ 0.36
LRFN3-201ENST00000246529 TWIST2Q8WVJ9 160 aa17.31■□□□□ 0.36
LRFN3-201ENST00000246529 PEX13Q92968 403 aa17.31■□□□□ 0.36
LRFN3-201ENST00000246529 LRCH3Q96II8 777 aa17.31■□□□□ 0.36
LRFN3-201ENST00000246529 GPR21Q99679 349 aa17.31■□□□□ 0.36
LRFN3-201ENST00000246529 TUBB1Q9H4B7 451 aa17.31■□□□□ 0.36
LRFN3-201ENST00000246529 SEMA4BQ9NPR2 832 aaPredicted RBP17.31■□□□□ 0.36
LRFN3-201ENST00000246529 COMMD8Q9NX08 183 aa17.31■□□□□ 0.36
LRFN3-201ENST00000246529 SMPD4Q9NXE4 827 aa17.31■□□□□ 0.36
LRFN3-201ENST00000246529 FKBPLQ9UIM3 349 aa17.31■□□□□ 0.36
LRFN3-201ENST00000246529 PEX1O43933 1283 aa17.31■□□□□ 0.36
LRFN3-201ENST00000246529 CLASP2O75122 1294 aaKnown RBP17.31■□□□□ 0.36
LRFN3-201ENST00000246529 EEF1DP29692 281 aaKnown RBP17.31■□□□□ 0.36
LRFN3-201ENST00000246529 ELAVL2Q12926 359 aaKnown RBP17.31■□□□□ 0.36
LRFN3-201ENST00000246529 BTG3Q14201 252 aaPredicted RBP17.31■□□□□ 0.36
LRFN3-201ENST00000246529 KIF19Q2TAC6 998 aa17.31■□□□□ 0.36
LRFN3-201ENST00000246529 ACBD5Q5T8D3 534 aaPredicted RBP17.31■□□□□ 0.36
LRFN3-201ENST00000246529 RNF219Q5W0B1 726 aaPredicted RBP17.31■□□□□ 0.36
LRFN3-201ENST00000246529 SEPT8Q92599 483 aa17.31■□□□□ 0.36
LRFN3-201ENST00000246529 UNC93B1Q9H1C4 597 aa17.31■□□□□ 0.36
LRFN3-201ENST00000246529 RNF112Q9ULX5 631 aa17.31■□□□□ 0.36
LRFN3-201ENST00000246529 PCDHGB4Q9UN71 923 aa17.31■□□□□ 0.36
LRFN3-201ENST00000246529 PCDHGB5Q9Y5G0 923 aa17.31■□□□□ 0.36
LRFN3-201ENST00000246529 RAI2Q9Y5P3 530 aa17.31■□□□□ 0.36
LRFN3-201ENST00000246529 MKI67P46013 3256 aaKnown RBP17.31■□□□□ 0.36
LRFN3-201ENST00000246529 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.3■□□□□ 0.36
LRFN3-201ENST00000246529 NPEPPSL1A6NEC2 478 aa17.3■□□□□ 0.36
LRFN3-201ENST00000246529 NDUFS3O75489 264 aa17.3■□□□□ 0.36
LRFN3-201ENST00000246529 RNASEH2AO75792 299 aaKnown RBP17.3■□□□□ 0.36
LRFN3-201ENST00000246529 PENKP01210 267 aaPredicted RBP17.3■□□□□ 0.36
LRFN3-201ENST00000246529 LINC00032P0C843 101 aa17.3■□□□□ 0.36
LRFN3-201ENST00000246529 BMP1P13497 986 aa17.3■□□□□ 0.36
LRFN3-201ENST00000246529 HMGA1P17096 107 aaKnown RBP17.3■□□□□ 0.36
LRFN3-201ENST00000246529 CCL23P55773 120 aa17.3■□□□□ 0.36
LRFN3-201ENST00000246529 XIAPP98170 497 aa17.3■□□□□ 0.36
LRFN3-201ENST00000246529 SMARCB1Q12824 385 aa17.3■□□□□ 0.36
LRFN3-201ENST00000246529 ZNF177Q13360 481 aaPredicted RBP17.3■□□□□ 0.36
LRFN3-201ENST00000246529 PDK3Q15120 406 aa17.3■□□□□ 0.36
LRFN3-201ENST00000246529 TLR1Q15399 786 aa17.3■□□□□ 0.36
LRFN3-201ENST00000246529 PTPRNQ16849 979 aa17.3■□□□□ 0.36
LRFN3-201ENST00000246529 IL23RQ5VWK5 629 aa17.3■□□□□ 0.36
LRFN3-201ENST00000246529 RAB44Q7Z6P3 723 aaPredicted RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms